Coccinella septempunctata (seven-spotted ladybird): 123309774
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Entry
123309774 CDS
T07873
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03013
Nucleocytoplasmic transport
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123309774
09122 Translation
03013 Nucleocytoplasmic transport
123309774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123309774
03041 Spliceosome [BR:
cset03041
]
123309774
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123309774
Spliceosome [BR:
cset03041
]
Complex C
Other components
EJC/TREX
123309774
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123309774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
123309774
NCBI-ProteinID:
XP_044748967
LinkDB
All DBs
Position
3:complement(40562583..40577158)
Genome browser
AA seq
1542 aa
AA seq
DB search
MDGVNEEIWKNWEKGGKNEFTKLCVQLVKDDTRSPLFDKNGKLTEITSYINILIEKGLQG
TIRKESVVGVLQELVVLHSDIPSIILDVLNIADASSAQIDNASEESKERNIFCFIIKECE
KFVSDKLLKERLEIDTLQEVGILKNRAFYSKFIKVKTKLYYKQKKFNLFREECEGFSKLI
TELNQEFNENTNNERILGIVQSLIGCFNLDPNRVLDIILESFENKPDDAHLFIPLVKSYM
SDPKIISEVLGSKYSFLRNTENGAPKSLHILTAQLLQNSIISLDDIYPWLTPDDKIMQKE
CEKNMKEAKEYFRKLQVISVNKTDKEETPEEPENPIEKYKWNQKLGLCEALLLIGDWENA
KILINHLPEHYAVGFEPIALALCNLLHYVIEPVYRENFKLGTKFKGKPIPPHKNPKAPKA
AQTFEDLRQNAFPMLLTLAPSLRYDTVLMCKVIRLAKLILGSYGVENAKSEVPEDKMLYF
DILTLLDITILPSLSYLDCNCCIAEEIWTLLKLYPYQIRYCLYNRWKNDTYMIYPDLLRK
RGDSEKQIKNIMKRVSKENVKPVGRSIGKLTHCSPGFLFDYVLLQIQVYNNLIHPVVDSL
KYLTSLSYDVLGYCLIECLANADKKRVKHDSTSISTWLQSLSSFCGAIYKKYNIELSGLL
QYVANQLKAQKSLDLLILKEVVQKMAGIESAEDLTIDQLSAMAGGELLRAEAGYFGQVRN
TKKSSLRLKEAMADQNLAVSLCLLMAQQKYCVVYKETQQSHLKLVGKLSDQCQDTLVQFG
NFLGSTMSVDEYVNKLPSIQSMLLNYHIPNEVAFFLARPMFNHEINIKYDQLRKADTNYK
KLSTSVKHQKYFEAVTEVMQPVHKSLIPLHPMKIWEDISPQFLATFWSLTMYDLCIPEDT
YTEVINKLKQQSLSVLDSNSNKGKKEQERHATLIEKLQDEKKKQSEHVDKVMYRLKQEKD
HWFVSKTAKTAKNETITRFLQLCLFPRCTFTAIDALYCAKFVHVIHMLKTPNFSTLLCYD
RLFCDITYSVTSCTENEAMRYGRFLYAMLETVMRWHRSKDVFEKECANYPGFVTKFRVSN
QHADNMDNVGYENYRHVCHKWHYKLAKAMVTCLESKDYIQIRNALIILIKIINYFPVLIK
LSQFVEKRIEKVRDEEKNNRQDLFTLSSSYLALLKQRIASGNMVKEGDFHIIIEKVSKTQ
HDQKTSNSSTKHNGDSKDEKEKVEKKSSKQVDEVKTVVKTQSPEQNGSKEKVEKTYKEET
REKHRKEDKPRDDADKEREREKRRERKEEKLLKQEEWQYREERERYQDAGPKDETRYSNE
RSVERYYDDRGAPHYYRDVRDDRDLAVGSNGSASMGRHSQETDPDREAKRRKLDGSSKLQ
ERQQIEVEAAAILKPRPTASNVKLPIVCLQSSKHEDRSKVQHQQQFDYVGEKVEKKERTV
KVKEKRDKLTEEERELRKERKLGRKRDRGDEAQQQAEIKRRRDEERAKILPHPNGELMEP
SQHSREKHHRSTRELSPYSRERSHDRVEVRDKHRRSAENKRR
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgtaaacgaggaaatttggaaaaattgggaaaaaggtggcaagaacgaattt
accaaactttgtgtgcaattagtcaaagatgatacacgaagtcctctatttgataaaaat
gggaagctcactgaaattacttcctacataaatattttgattgagaaaggtctccaaggg
accattagaaaagaatctgttgttggtgttttacaagaattagtggttcttcacagtgac
attccttctattatattagatgttttaaatattgctgatgcatcgtcagctcaaatagat
aatgcatctgaggaatccaaggaaagaaacattttttgtttcattattaaagaatgtgaa
aagtttgtgtcagataaattattgaaagaacgattggaaattgatacacttcaagaagtt
ggtattttaaaaaatagggcattctattcaaagttcataaaagttaaaacgaagttatac
tacaagcagaaaaaattcaatctttttcgtgaggaatgtgagggtttttctaagcttatc
acagagttgaatcaagaattcaatgaaaatacaaataatgaaagaattttgggaattgtt
caatctctcatcggttgtttcaatttggatcctaacagggtgttagacatcattttggaa
agcttcgaaaataaaccagacgatgcgcatttattcattcctcttgtaaaatcttatatg
agtgatccaaaaatcattagtgaagttctaggatccaaatatagctttttaagaaatact
gaaaatggcgcaccgaaaagtctgcatatccttacagcccagttattacaaaactctatc
atatctttggatgacatttacccctggttaactccagacgataaaatcatgcagaaggaa
tgtgaaaagaacatgaaggaagccaaagaatatttcagaaaattacaggtgatatcagtt
aataagacagataaagaagaaacgccagaagaaccagaaaatcctatcgaaaaatataaa
tggaaccaaaaacttggtttgtgtgaagcgttactattgataggggactgggagaacgcc
aaaattttgataaatcatctacccgaacattatgccgttggtttcgaacctatcgctctg
gctttgtgtaacttgctgcattatgtcattgaacccgtctacagagagaacttcaagtta
ggtacgaaattcaaaggaaaaccgattcccccgcataaaaatcccaaagctccgaaagca
gctcaaactttcgaagatcttcgtcagaatgcttttccgatgctgttgactttggcacct
tctttgcgttatgacaccgttctcatgtgcaaggtgatccgtttagccaaattgatattg
ggttcttacggcgtcgaaaacgccaagagtgaagttccggaagataaaatgctctacttc
gacattctaaccttgttagacataacgatcctgccttcgttatcgtatctggactgcaac
tgttgtattgctgaagaaatatggaccctgctgaaactatacccctaccagataaggtac
tgcctatacaacagatggaaaaacgacacttacatgatctacccagatttgttgagaaaa
cgtggagattccgagaaacaaatcaagaatataatgaaaagggtgagcaaagaaaatgtt
aagccggtcggaagatccattgggaaactcacccattgttcaccggggttcctgttcgat
tacgtactcttacaaatccaagtgtacaacaatctcatccatccggtggtggattctttg
aaatatctaacgagtctgtcttacgatgtattgggctattgcttaatcgaatgcctggcc
aacgccgataagaagagagttaaacacgacagcacctcgatatcgacttggctccagagt
ttgtccagcttttgtggcgccatttacaaaaagtacaatattgagctatctgggttgttg
cagtacgtggccaatcagctcaaggctcagaaaagcttggatttactcatactgaaagaa
gttgtacaaaagatggcgggcatagagtctgccgaagatcttactatcgatcaattgagc
gcgatggctggtggggagttactaagggctgaggctggttactttggccaagtgaggaac
acaaaaaaatcatccttacgtctcaaggaggccatggccgatcaaaacttggccgtttcc
ctctgcctactgatggcccaacagaaatactgcgtagtttacaaggaaacgcagcagagt
catttgaagttggtcgggaagctttccgatcagtgccaggacacgctggtgcagtttggc
aacttcctaggctcgacgatgtctgtcgacgaatacgtcaataaattgcccagcatccag
agtatgctgctcaattaccatatcccgaatgaggtggccttcttcctggccagacctatg
ttcaatcatgaaatcaatataaaatacgatcaactccgaaaggccgacacgaattacaag
aagctctccacgagcgtgaaacatcagaaatatttcgaagccgtgacggaagtgatgcag
cccgttcacaaatccctgattcctcttcaccccatgaaaatatgggaagacatctccccg
cagttcctggccaccttctggtcgttaacgatgtacgatctgtgcatcccggaggatact
tacacggaggtgataaacaagctgaaacagcagagcctgtccgttctcgattctaacagc
aacaagggtaagaaggaacaagagagacacgccaccctgatcgagaagcttcaggacgag
aagaagaagcagtcggaacatgtggataaagttatgtacaggctgaagcaggagaaagac
cactggttcgtctcgaaaactgccaaaactgcgaagaacgagaccatcaccaggtttctt
cagttgtgtctgttccccaggtgtacgttcacagccatagacgcgctttattgcgcgaag
ttcgtccacgtcattcatatgctgaaaactccgaatttctccacccttctttgctacgac
agacttttctgtgatataacctactccgtcacttcgtgcactgagaatgaagcgatgagg
tacggtagatttttatatgcgatgctggaaactgtgatgcgttggcacaggtcgaaagac
gtattcgagaaggagtgcgctaattatccaggcttcgtgactaaattcagggtcagtaat
caacatgcggacaacatggataatgtgggttacgagaactacaggcacgtctgccacaag
tggcattataagctggcgaaggcgatggtgacctgtctggaatccaaggattacatacaa
atcaggaacgccctgatcatcctgatcaagataataaactattttcccgttttgattaaa
ttgagtcagttcgtcgagaagaggatcgagaaggttagggacgaggagaaaaacaatagg
caggacttgttcacactgtcgagcagttatttggcgctgttgaaacagaggatagccagt
gggaacatggttaaagagggagattttcatatcatcattgaaaaggtttccaaaacacag
cacgatcaaaaaacgtcaaattcaagtacaaaacacaatggagactccaaagatgagaag
gaaaaggttgagaagaagtccagtaaacaggtcgatgaagtcaaaacggtggtgaaaacc
cagagtcccgaacagaatggttcgaaagaaaaagtggaaaaaacatacaaagaagaaacg
agagaaaaacataggaaagaagataaaccgagagacgatgcggacaaagaaagggagagg
gaaaaacgaagagaaaggaaagaagagaaacttctgaagcaagaagaatggcaatataga
gaggaaagagaaagatatcaagacgcaggtcccaaagatgaaacaagatattccaatgaa
agatcggtagaacgctattacgacgacagaggagccccccattattatagagatgtcagg
gatgatagagatttggctgttggaagtaacggatcagcaagcatgggacgacattctcag
gaaactgatcctgacagagaagctaaaaggagaaaattggatggatcttccaagttgcaa
gagcggcagcagatcgaagtagaggctgccgccatcctcaagccacgcccaacggcatct
aatgtcaaactaccgattgtgtgtctacagagctcgaagcacgaagacaggtccaaggtc
cagcatcagcaacagttcgattatgtcggcgaaaaggtcgagaagaaggaaaggacggtg
aaggtaaaagagaaaagggataaattaactgaggaagaacgggaattgagaaaagagagg
aaactgggcaggaagagggatcgtggggacgaagcccaacagcaagccgaaatcaaacga
agaagagacgaagaaagagccaaaattctacctcatccaaatggagaactgatggaacct
tcacaacattcgagagaaaaacaccatagatcaacaagagagctgtccccatattcgaga
gaaagatctcatgatagagttgaagttagggacaaacacagaagaagtgctgaaaacaag
aggaggtaa
DBGET
integrated database retrieval system