KEGG   Coccinella septempunctata (seven-spotted ladybird): 123309774
Entry
123309774         CDS       T07873                                 
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
cset  Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03013  Nucleocytoplasmic transport
cset03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cset00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123309774
  09122 Translation
   03013 Nucleocytoplasmic transport
    123309774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cset03019]
    123309774
   03041 Spliceosome [BR:cset03041]
    123309774
Messenger RNA biogenesis [BR:cset03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     123309774
Spliceosome [BR:cset03041]
 Complex C
  Other components
   EJC/TREX
    123309774
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123309774
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 123309774
NCBI-ProteinID: XP_044748967
LinkDB
Position
3:complement(40562583..40577158)
AA seq 1542 aa
MDGVNEEIWKNWEKGGKNEFTKLCVQLVKDDTRSPLFDKNGKLTEITSYINILIEKGLQG
TIRKESVVGVLQELVVLHSDIPSIILDVLNIADASSAQIDNASEESKERNIFCFIIKECE
KFVSDKLLKERLEIDTLQEVGILKNRAFYSKFIKVKTKLYYKQKKFNLFREECEGFSKLI
TELNQEFNENTNNERILGIVQSLIGCFNLDPNRVLDIILESFENKPDDAHLFIPLVKSYM
SDPKIISEVLGSKYSFLRNTENGAPKSLHILTAQLLQNSIISLDDIYPWLTPDDKIMQKE
CEKNMKEAKEYFRKLQVISVNKTDKEETPEEPENPIEKYKWNQKLGLCEALLLIGDWENA
KILINHLPEHYAVGFEPIALALCNLLHYVIEPVYRENFKLGTKFKGKPIPPHKNPKAPKA
AQTFEDLRQNAFPMLLTLAPSLRYDTVLMCKVIRLAKLILGSYGVENAKSEVPEDKMLYF
DILTLLDITILPSLSYLDCNCCIAEEIWTLLKLYPYQIRYCLYNRWKNDTYMIYPDLLRK
RGDSEKQIKNIMKRVSKENVKPVGRSIGKLTHCSPGFLFDYVLLQIQVYNNLIHPVVDSL
KYLTSLSYDVLGYCLIECLANADKKRVKHDSTSISTWLQSLSSFCGAIYKKYNIELSGLL
QYVANQLKAQKSLDLLILKEVVQKMAGIESAEDLTIDQLSAMAGGELLRAEAGYFGQVRN
TKKSSLRLKEAMADQNLAVSLCLLMAQQKYCVVYKETQQSHLKLVGKLSDQCQDTLVQFG
NFLGSTMSVDEYVNKLPSIQSMLLNYHIPNEVAFFLARPMFNHEINIKYDQLRKADTNYK
KLSTSVKHQKYFEAVTEVMQPVHKSLIPLHPMKIWEDISPQFLATFWSLTMYDLCIPEDT
YTEVINKLKQQSLSVLDSNSNKGKKEQERHATLIEKLQDEKKKQSEHVDKVMYRLKQEKD
HWFVSKTAKTAKNETITRFLQLCLFPRCTFTAIDALYCAKFVHVIHMLKTPNFSTLLCYD
RLFCDITYSVTSCTENEAMRYGRFLYAMLETVMRWHRSKDVFEKECANYPGFVTKFRVSN
QHADNMDNVGYENYRHVCHKWHYKLAKAMVTCLESKDYIQIRNALIILIKIINYFPVLIK
LSQFVEKRIEKVRDEEKNNRQDLFTLSSSYLALLKQRIASGNMVKEGDFHIIIEKVSKTQ
HDQKTSNSSTKHNGDSKDEKEKVEKKSSKQVDEVKTVVKTQSPEQNGSKEKVEKTYKEET
REKHRKEDKPRDDADKEREREKRRERKEEKLLKQEEWQYREERERYQDAGPKDETRYSNE
RSVERYYDDRGAPHYYRDVRDDRDLAVGSNGSASMGRHSQETDPDREAKRRKLDGSSKLQ
ERQQIEVEAAAILKPRPTASNVKLPIVCLQSSKHEDRSKVQHQQQFDYVGEKVEKKERTV
KVKEKRDKLTEEERELRKERKLGRKRDRGDEAQQQAEIKRRRDEERAKILPHPNGELMEP
SQHSREKHHRSTRELSPYSRERSHDRVEVRDKHRRSAENKRR
NT seq 4629 nt   +upstreamnt  +downstreamnt
atggatggtgtaaacgaggaaatttggaaaaattgggaaaaaggtggcaagaacgaattt
accaaactttgtgtgcaattagtcaaagatgatacacgaagtcctctatttgataaaaat
gggaagctcactgaaattacttcctacataaatattttgattgagaaaggtctccaaggg
accattagaaaagaatctgttgttggtgttttacaagaattagtggttcttcacagtgac
attccttctattatattagatgttttaaatattgctgatgcatcgtcagctcaaatagat
aatgcatctgaggaatccaaggaaagaaacattttttgtttcattattaaagaatgtgaa
aagtttgtgtcagataaattattgaaagaacgattggaaattgatacacttcaagaagtt
ggtattttaaaaaatagggcattctattcaaagttcataaaagttaaaacgaagttatac
tacaagcagaaaaaattcaatctttttcgtgaggaatgtgagggtttttctaagcttatc
acagagttgaatcaagaattcaatgaaaatacaaataatgaaagaattttgggaattgtt
caatctctcatcggttgtttcaatttggatcctaacagggtgttagacatcattttggaa
agcttcgaaaataaaccagacgatgcgcatttattcattcctcttgtaaaatcttatatg
agtgatccaaaaatcattagtgaagttctaggatccaaatatagctttttaagaaatact
gaaaatggcgcaccgaaaagtctgcatatccttacagcccagttattacaaaactctatc
atatctttggatgacatttacccctggttaactccagacgataaaatcatgcagaaggaa
tgtgaaaagaacatgaaggaagccaaagaatatttcagaaaattacaggtgatatcagtt
aataagacagataaagaagaaacgccagaagaaccagaaaatcctatcgaaaaatataaa
tggaaccaaaaacttggtttgtgtgaagcgttactattgataggggactgggagaacgcc
aaaattttgataaatcatctacccgaacattatgccgttggtttcgaacctatcgctctg
gctttgtgtaacttgctgcattatgtcattgaacccgtctacagagagaacttcaagtta
ggtacgaaattcaaaggaaaaccgattcccccgcataaaaatcccaaagctccgaaagca
gctcaaactttcgaagatcttcgtcagaatgcttttccgatgctgttgactttggcacct
tctttgcgttatgacaccgttctcatgtgcaaggtgatccgtttagccaaattgatattg
ggttcttacggcgtcgaaaacgccaagagtgaagttccggaagataaaatgctctacttc
gacattctaaccttgttagacataacgatcctgccttcgttatcgtatctggactgcaac
tgttgtattgctgaagaaatatggaccctgctgaaactatacccctaccagataaggtac
tgcctatacaacagatggaaaaacgacacttacatgatctacccagatttgttgagaaaa
cgtggagattccgagaaacaaatcaagaatataatgaaaagggtgagcaaagaaaatgtt
aagccggtcggaagatccattgggaaactcacccattgttcaccggggttcctgttcgat
tacgtactcttacaaatccaagtgtacaacaatctcatccatccggtggtggattctttg
aaatatctaacgagtctgtcttacgatgtattgggctattgcttaatcgaatgcctggcc
aacgccgataagaagagagttaaacacgacagcacctcgatatcgacttggctccagagt
ttgtccagcttttgtggcgccatttacaaaaagtacaatattgagctatctgggttgttg
cagtacgtggccaatcagctcaaggctcagaaaagcttggatttactcatactgaaagaa
gttgtacaaaagatggcgggcatagagtctgccgaagatcttactatcgatcaattgagc
gcgatggctggtggggagttactaagggctgaggctggttactttggccaagtgaggaac
acaaaaaaatcatccttacgtctcaaggaggccatggccgatcaaaacttggccgtttcc
ctctgcctactgatggcccaacagaaatactgcgtagtttacaaggaaacgcagcagagt
catttgaagttggtcgggaagctttccgatcagtgccaggacacgctggtgcagtttggc
aacttcctaggctcgacgatgtctgtcgacgaatacgtcaataaattgcccagcatccag
agtatgctgctcaattaccatatcccgaatgaggtggccttcttcctggccagacctatg
ttcaatcatgaaatcaatataaaatacgatcaactccgaaaggccgacacgaattacaag
aagctctccacgagcgtgaaacatcagaaatatttcgaagccgtgacggaagtgatgcag
cccgttcacaaatccctgattcctcttcaccccatgaaaatatgggaagacatctccccg
cagttcctggccaccttctggtcgttaacgatgtacgatctgtgcatcccggaggatact
tacacggaggtgataaacaagctgaaacagcagagcctgtccgttctcgattctaacagc
aacaagggtaagaaggaacaagagagacacgccaccctgatcgagaagcttcaggacgag
aagaagaagcagtcggaacatgtggataaagttatgtacaggctgaagcaggagaaagac
cactggttcgtctcgaaaactgccaaaactgcgaagaacgagaccatcaccaggtttctt
cagttgtgtctgttccccaggtgtacgttcacagccatagacgcgctttattgcgcgaag
ttcgtccacgtcattcatatgctgaaaactccgaatttctccacccttctttgctacgac
agacttttctgtgatataacctactccgtcacttcgtgcactgagaatgaagcgatgagg
tacggtagatttttatatgcgatgctggaaactgtgatgcgttggcacaggtcgaaagac
gtattcgagaaggagtgcgctaattatccaggcttcgtgactaaattcagggtcagtaat
caacatgcggacaacatggataatgtgggttacgagaactacaggcacgtctgccacaag
tggcattataagctggcgaaggcgatggtgacctgtctggaatccaaggattacatacaa
atcaggaacgccctgatcatcctgatcaagataataaactattttcccgttttgattaaa
ttgagtcagttcgtcgagaagaggatcgagaaggttagggacgaggagaaaaacaatagg
caggacttgttcacactgtcgagcagttatttggcgctgttgaaacagaggatagccagt
gggaacatggttaaagagggagattttcatatcatcattgaaaaggtttccaaaacacag
cacgatcaaaaaacgtcaaattcaagtacaaaacacaatggagactccaaagatgagaag
gaaaaggttgagaagaagtccagtaaacaggtcgatgaagtcaaaacggtggtgaaaacc
cagagtcccgaacagaatggttcgaaagaaaaagtggaaaaaacatacaaagaagaaacg
agagaaaaacataggaaagaagataaaccgagagacgatgcggacaaagaaagggagagg
gaaaaacgaagagaaaggaaagaagagaaacttctgaagcaagaagaatggcaatataga
gaggaaagagaaagatatcaagacgcaggtcccaaagatgaaacaagatattccaatgaa
agatcggtagaacgctattacgacgacagaggagccccccattattatagagatgtcagg
gatgatagagatttggctgttggaagtaacggatcagcaagcatgggacgacattctcag
gaaactgatcctgacagagaagctaaaaggagaaaattggatggatcttccaagttgcaa
gagcggcagcagatcgaagtagaggctgccgccatcctcaagccacgcccaacggcatct
aatgtcaaactaccgattgtgtgtctacagagctcgaagcacgaagacaggtccaaggtc
cagcatcagcaacagttcgattatgtcggcgaaaaggtcgagaagaaggaaaggacggtg
aaggtaaaagagaaaagggataaattaactgaggaagaacgggaattgagaaaagagagg
aaactgggcaggaagagggatcgtggggacgaagcccaacagcaagccgaaatcaaacga
agaagagacgaagaaagagccaaaattctacctcatccaaatggagaactgatggaacct
tcacaacattcgagagaaaaacaccatagatcaacaagagagctgtccccatattcgaga
gaaagatctcatgatagagttgaagttagggacaaacacagaagaagtgctgaaaacaag
aggaggtaa

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