Coccinella septempunctata (seven-spotted ladybird): 123309956
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Entry
123309956 CDS
T07873
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123309956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123309956
03009 Ribosome biogenesis [BR:
cset03009
]
123309956
Enzymes [BR:
cset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123309956
Spliceosome [BR:
cset03041
]
Complex A
U1 snRNP components
U1 related factors
123309956
Complex B
123309956
Ribosome biogenesis [BR:
cset03009
]
Eukaryotic type
Pre-60S particles
Helicases
123309956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
RNA_pol_Rpb4
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
123309956
NCBI-ProteinID:
XP_044749207
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All DBs
Position
1:complement(21162982..21172275)
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AA seq
562 aa
AA seq
DB search
MSFGTKQFVNTSYKPRPPQSGAYNSQMNGNRGGNFGNNRFQKIGGGFGPNRNGSGNFHSQ
KDNSYDFNGPQGLEKINWSKVNLLPFQKDFYVPHPAVHQRSPFEIEEYRRAKEISVENIA
PNPIQNFSEANFPDYVMNTIIKLGYESPTPIQAQGWPTALSGRDLVGIAKTGSGKTLAYI
LPAIVHINNQQRLSRDDGPIALVLAPTRELAQQIQQVANEFGNSSYIRNTCIFGGAPKGP
QSRDLERGVEIVIATPGRLIDFLQRGTTNLKRCTYLVLDEADRMLDMGFEPQIRKILEQI
RPDRQTLMWSATWPKEVQKLAHDFLTDYVQINIGSLQPSANHNIHQIVDVCQETEKEQKL
SMLLQEIGNTMETDSKVIIFVETKKKVESITKTIGSYGWPALSIHGDKSQNERDYVLRSF
RKGGQYSILVATDVAARGLDVDGIKYVINYDYPHSSEDYIHRIGRTGRSDTTGTSYAFFT
PSNYKHAKDLISVLKEAKQVVNPKLSEMATRFGGFGGAKGRWGQNNGNGFNYRNMNNGPR
PNSRWGNSAEQKPYGSYTKNGY
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggaacaaagcaattcgtaaacaccagttacaaacctcgccctcctcaaagt
ggggcttacaactctcaaatgaatggcaatagaggcggtaattttggaaataatcgtttt
caaaaaattggtggaggatttggtcctaacagaaatggaagcggaaattttcattctcaa
aaggataattcgtatgacttcaatggtccccagggactcgaaaaaatcaattggagcaag
gtcaacttactaccttttcaaaaggatttttatgtcccacatccagcggtccatcaaaga
tccccctttgagattgaagaatatcgtagggccaaagaaataagtgtagaaaatattgca
ccaaatccaattcaaaatttttctgaagccaatttccctgattatgttatgaatacaata
atcaaattaggatacgaaagtcctactcccattcaggctcaaggttggccaactgcactc
agtggaagggatcttgttggaatagctaaaacaggatcagggaaaacattggcgtacatt
ctacctgcaattgtccatataaataatcagcaaagactttcacgcgatgatgggcccatt
gcattagtcttagcacctaccagagagttggcacaacagattcaacaagttgccaatgaa
tttggtaattcgtcttacattcgcaacacttgcatatttggaggggctcctaaagggccc
cagagtcgtgatttagaaagaggagttgaaattgttatagctacacctggaagacttatt
gattttctccaaagaggtacaacaaatttgaaacgatgtacttatttggtgctggatgag
gctgatcgtatgttagatatgggttttgaaccccaaattcgtaagatattggaacaaatt
agacctgaccgacaaactttgatgtggtctgctacatggcctaaggaagttcaaaaactt
gcccatgactttttgacggattatgttcaaattaatataggatcacttcagccctcagcc
aaccataatattcatcaaattgttgatgtctgccaagaaactgagaaagaacaaaaattg
agtatgctgcttcaggaaataggaaacacaatggagacagattcaaaagtgataatattt
gtagaaactaaaaagaaggttgagagtattaccaaaactataggaagttatggctggcct
gctttaagtatacatggtgataaaagtcaaaatgaacgtgattatgttctaaggtccttc
agaaaaggaggacaatattccattctggttgctactgatgtagctgctagggggcttgat
gttgacggtattaaatacgtcataaattacgattaccctcactcgtctgaagactacatt
catagaattggccgaactggccgttctgataccacaggaacatcatatgcattcttcact
ccatctaattacaaacatgccaaagatctgatctcagtactcaaagaagcaaaacaggtt
gtaaatccaaaattgagtgaaatggcaaccaggtttggaggtttcggcggtgccaaagga
agatggggtcaaaataatggcaatggatttaattatagaaatatgaataatgggccaaga
ccaaattcaagatggggcaattccgccgagcaaaagccatatggttcatacactaagaat
gggtattga
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