KEGG   Coccinella septempunctata (seven-spotted ladybird): 123310100
Entry
123310100         CDS       T07873                                 
Name
(RefSeq) general transcription factor IIH subunit 1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
cset  Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03022  Basal transcription factors
cset03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cset00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123310100
  09124 Replication and repair
   03420 Nucleotide excision repair
    123310100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cset03021]
    123310100
   03400 DNA repair and recombination proteins [BR:cset03400]
    123310100
Transcription machinery [BR:cset03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     123310100
DNA repair and recombination proteins [BR:cset03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     123310100
SSDB
Motif
Pfam: BSD PH_TFIIH HTH_36
Other DBs
NCBI-GeneID: 123310100
NCBI-ProteinID: XP_044749417
LinkDB
Position
3:26239746..26248510
AA seq 561 aa
MTTSSEDVLLQIPQVRFKKGDGTLFLMDQRLIWMVENRDTVAVSHLYEDIKSQKISPEGK
AKIQLQVVLHNGVSSTFHFTNSKGLPAQVADRDKVKEMLQSLLPKFKKKMDRELEEKNRL
LMSNPALLQLYKDLVMPEVITSEEFWSQHAVKYTQNQKQQPQEIGVSGAFLADIKPQTDG
CNGLKYNITPDIIECIFKTYPAVKKKFIDNVPSKMSESQFWTKFFQSHYFHRDRKYAESK
DIFTECGKIDDQEMKRDIQRGVDDPLVNITEFEDKTLDEAYGTSTERSTVNSGTVSQAMI
KRFNQHSIMVLKANKNKASEVNSQSGTENNSKPTNGMAVSNKDKTILSESIEPAKKKQKI
LEKITYEDLDSEDKNKNNSSIQLNLSKVERYLHGPMPDTIIEHINPNEGSSILRSVFQEA
KQWNVSQTRHSSNSLVSPAAAVGALGELSPGGALMRGFQEQSLAQLVPPNIETELRNLYL
ALCELLNHFWKCFPATQPNQEEKVMKMHEALHRYHTAKLKPFEDKLIRELSPLSHHLTKH
LNQLLNAAYQKYSNWQKLKHR
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgactacctcaagtgaagatgttcttctacaaattccacaagttcgtttcaaaaaagga
gacggaaccctttttctaatggaccaacgtttgatttggatggttgaaaatagagatact
gtagcagtctcacatctttatgaagatataaaatctcagaaaatttcccctgaaggtaaa
gcgaaaattcagcttcaggttgttttacacaatggtgtttcttcaactttccattttaca
aattcaaagggattaccagctcaagtcgcagatagggataaggtcaaggaaatgcttcaa
agcctgttaccgaagtttaaaaaaaaaatggacagggaacttgaagagaaaaatagattg
ttgatgtcgaatcctgccctactacaattatataaggatttagttatgcctgaagttata
acttctgaagagttttggagtcaacatgctgtcaaatatactcaaaatcagaaacagcag
ccacaagaaattggtgtttctggagcctttttagcagacattaaaccacaaactgatggc
tgtaatgggcttaaatataatataactcctgatattatagaatgtatcttcaagacatat
ccagcagtaaagaagaagtttattgataatgttccttcaaaaatgtcagaatctcaattt
tggacaaaattcttccagtctcactactttcatagggatagaaaatatgcagaaagcaag
gacatatttacagaatgtggaaaaatagatgatcaagaaatgaaaagagatattcagaga
ggggtcgatgacccattagttaatatcacagaatttgaggataaaactttagatgaagct
tatggaacctctactgaaagaagtacagtaaatagtggaacagttagtcaagctatgatt
aaacgcttcaatcaacattcaattatggtattgaaagcaaataaaaataaagcaagtgaa
gttaattcacaaagtggtaccgaaaataactcaaaaccaactaatggtatggcagtaagc
aataaagataaaactatactaagtgaaagtattgagccagcaaaaaagaaacaaaaaata
ctggagaaaattacttatgaagatttagattcagaggataaaaacaaaaataattcaagc
atacaattgaatctttccaaggttgaaaggtatcttcatggtccaatgcctgatacaata
atagaacatataaatccaaatgagggctcttccatattgaggtcagtttttcaggaagct
aaacagtggaatgtaagtcagactagacattcgtcgaacagtctagtcagtcctgctgca
gctgttggggctttgggagaactttcacctggtggtgccctcatgaggggtttccaagaa
caatctttagcacaattggtaccaccaaacattgaaactgagctgaggaatctatatttg
gctctttgtgaattattgaatcacttctggaaatgctttccagcgactcaacctaatcag
gaagagaaagttatgaaaatgcatgaagcattacacagataccatactgccaaattgaag
ccatttgaggataaattgatcagggagctttcacctctttcacatcacctaaccaaacat
ttgaatcagctactgaatgcagcttaccagaaatatagtaattggcaaaaattaaaacat
cgatga

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