Coccinella septempunctata (seven-spotted ladybird): 123310888
Help
Entry
123310888 CDS
T07873
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset04140
Autophagy - animal
cset04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123310888
04148 Efferocytosis
123310888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cset04131
]
123310888
Membrane trafficking [BR:
cset04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
123310888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
WD40_CDC20-Fz
GREB1_2nd
Beta-prop_EML_2
B129_C2H2-zf
TPR_IF140-IFT172
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
123310888
NCBI-ProteinID:
XP_044750508
LinkDB
All DBs
Position
4:17053825..17059204
Genome browser
AA seq
833 aa
AA seq
DB search
MVNHEAYEIYPLISLSSQVESVAAYDDNLLIGTRQGFLFMYNVESGTEEKYNVQLMRLNK
SFSKKAISQLEVVPDYQLLICLTDNIVQVHDINSINFNLITQIQRTRGATYFTLNIRREK
SLTGGGAVLVRMAVVVKRKLQLYYLKNNEFMQLGEDINLSEVPRSVIWSQESLCIGYKGE
YALVELTDNKHSELFPTSGSRSSDPCMVKVSERAYALCRDSQTVFVNVKGETEITTALRW
SDVPLALAWDEPYVLAALPDKVEVKTPDAAGLTQTLSEMTKVRFLVSCNQGRVYAANLSQ
VWAITSVNIAKQRKLLLDSKQFQLALKLTAISDECEDDKREKVHHIQTLLAYDLFSNKQF
HESMKEFQKLKTDPYDVIRLFPELLPHQSGENNPLAGPPLVGKDLETGLLALIDYLTDIR
HPLKLEVANNNDAKSKTALHLLQIIDTTLLKCYLQTNDALVAPLLRLNYCHLSEAEKVLR
KMGRHNELVILYQTKGQHRKALELLKSEKAIERTIKYLQHLGPDQVGLILEFANWVLTEA
PEEGLRIFIEYNPDDEQPPKPRVLDFLLRSHPSVVIPYLEHVVHVWKDTNPLFHNALVHQ
YRERSMQEQTDVSRRLLLEFLEKSQNYIAESVLAQFPNEGFLEERAVILGRLGRHDESLA
IYIRVLGDIEKALKYCEKVYDANNSKCKGVYVSLIKQILDPDSCPPPSSILSPKTATPDV
ELALKIMDEHATQLDPIETLSYLPENVPIGRIQSFLLKALHKSISERRRAQLLKGLLYAE
HLQCQELRFRLQAQKVLITELNVCPVCKKRFGNQSALVRYPNGDVVHYSCQDK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatcatgaagcttatgagatttatcctttaatttcattatctagccaagttgaa
tcagtggctgcttatgatgacaatcttcttattggaacacgacaaggatttctatttatg
tacaatgtagaatcaggtacggaagaaaagtataatgttcaactgatgagattgaataaa
tctttcagtaaaaaagcaatttcccaattagaagtagttcctgactatcagctactgata
tgtctcacagacaatattgtacaagttcatgacattaattctataaatttcaatttaata
acgcaaattcaacgtactcggggtgccacctacttcaccttgaatataaggagggagaag
tccttgactggtggtggtgctgtccttgttcggatggcggttgttgtaaaaagaaaacta
cagctctattatttgaaaaataatgaattcatgcagttgggtgaagatataaacttaagt
gaggttccaagaagtgttatttggtctcaagaatcactttgtattggctataaaggggaa
tatgctcttgtagagttgactgataataaacattctgaactatttccaacaagtgggagt
cgttccagtgatccctgcatggttaaagtttcagaaagagcatatgctctttgtagagac
tctcaaacagtttttgtgaatgttaagggtgaaacagaaattactacggctctcagatgg
tcagatgtgcctcttgcattagcttgggatgaaccatatgttctggcagcccttccagat
aaagttgaagttaaaactcctgatgcagcaggtcttacccaaactttgagtgagatgacc
aaagtgagatttttagtatcatgcaatcaaggacgtgtatatgcagctaatttaagtcaa
gtttgggctataactagtgtcaatattgcaaaacagaggaaactgttactagattctaaa
caatttcaattagctctcaaattaactgcaatttctgatgagtgtgaagatgacaaaaga
gaaaaagttcatcatatacagactctattggcctatgatctcttttctaacaaacaattt
catgaaagcatgaaggaatttcaaaaattgaaaactgatccttatgatgttataagactt
ttccctgagcttttacctcatcaaagtggagagaataatccccttgccggtccaccattg
gttggtaaggacttggaaacaggattattggccctcatagattatttgactgatataaga
caccctcttaaactggaagtggcaaataataatgatgcaaagagtaaaactgctttgcat
ttacttcagattattgatactaccctattgaagtgctatttgcaaacaaatgatgctctt
gtggcccctctgttgagactgaattattgtcatttatcagaagctgaaaaggtattaagg
aaaatggggcgacataatgagttagtaatattgtatcaaactaaaggccagcatcgtaaa
gctttagagctgcttaaatctgaaaaagcaattgagaggacaattaagtatttgcagcat
ttaggtccagatcaggttggtctcattctggaatttgcaaattgggtgctgactgaagct
ccagaggagggcctacgtatttttatcgaatacaatccagatgatgagcaaccaccaaag
cctcgggttttagatttccttctgagatctcacccaagtgtagtcattccttaccttgaa
catgttgtccatgtgtggaaagatactaatccattatttcacaatgcattggtgcatcag
tatagggagagatcaatgcaagaacaaactgatgtatctagacgcttgctgttagaattt
ttggaaaagagtcaaaactatattgcagagtctgtcctggcacagtttccaaatgaaggt
tttctcgaggaaagggctgtgattttgggcagattaggaaggcatgatgagtcgttggct
atttatatcagagtattgggagatattgaaaaagcattgaagtattgtgaaaaggtgtat
gatgcaaataattcgaaatgtaaaggggtttatgtttctctcatcaagcaaatcttagac
ccagactcatgtcccccgcccagcagtattttgtccccgaaaactgctacaccagatgtg
gaattggctttgaaaatcatggatgaacacgcgacccaattagatcccattgaaacactt
agttatttaccagaaaatgtacctattggaagaattcaatcatttctgcttaaggctctc
cacaaatctatatcagaaaggagaagagcccaactgctgaaagggcttttatatgcagag
cacctgcaatgtcaagagttgagatttaggttgcaagctcagaaagttttgattactgaa
cttaacgtctgtccagtttgcaaaaaaaggtttggaaaccagagcgctctggtgagatac
ccaaatggagatgttgttcattattcttgtcaagataagtaa
DBGET
integrated database retrieval system
