Coccinella septempunctata (seven-spotted ladybird): 123311138
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Entry
123311138 CDS
T07873
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset04512
ECM-receptor interaction
cset04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123311138
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123311138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cset04147
]
123311138
00536 Glycosaminoglycan binding proteins [BR:
cset00536
]
123311138
Exosome [BR:
cset04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123311138
Glycosaminoglycan binding proteins [BR:
cset00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123311138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123311138
NCBI-ProteinID:
XP_044750863
LinkDB
All DBs
Position
4:complement(1521489..1533248)
Genome browser
AA seq
2069 aa
AA seq
DB search
MSSHGLRFVATILGIWITICDAQYLSNSNSRSTNRSDIYGQGYVRPYYERDSDTTETPEG
STDRYSEYGRRYHPRANAIESIDNRYREDGPLRGDQSGVSEGEGDYNNIQTGYSDTSYSG
GSGGYNAGYDSAQGSAEGSTQTPYTRSDYEARYGSGGYGYNQSGSENAGRASGGTASYGS
GGSGQSGAGGYGSRTYSSSSSGGAGRAGASYGSTGYSQTGGSQNAYGSGGYGSGQTNGPA
GSYGSDQSVRNSATYESRGYSYSNTGGYSGSGGYGSEQSGGYGSGSYGSQTGEQGSAGSS
LGSQDRNYNDRDSYGGRSDESSRNAYASSPYANRRPYSSSYDIYDAPGSALGPRNGSERC
IPKCFAEKGNRGFQGAPGTPGEKGLRGFPGEEGNMGPKGEKGDSGPMGPRGPKGNRGKQG
LPGFPGISGIPGMQGPPGQPGIPGLDGCNGTDGAEGPKGYSGEPGPRGYAGMPGVKGNKG
EPARCEINLKGQKGEPGRDGVTGPAGLPGPAGPIGPPGMPGDVGPMGFRGPPGPKGQKGQ
PGLGAEGQKGQKGEPGLRGPKGDSGIAKWAKNGTTTVGPKGEPGAPGERGAMGPPGEKGE
RGMDGDYGYPGQAGAKGEKGLPGPSGPRGRDGYSGPPGPPGQKGDRGMEGLSGLPGRQGL
KGEPGREGAPGFQGLPGPPGPPGGGNGRPGPPGPMGPRGYPGPIGPKGLDGFNGEPGPMG
PPGPTGGPGLTGRQGPEGPPGDKGEKGNTGLPGFPGTDGRIGFPGEPGPQGLQGLPGESG
RSIIGPKGDAGEPGRDGEKGQKGERGFTGARGAPGDSLYGKPGKDGPTGPPGEKGYPGRP
GIPGSPGLPGEKGDIGGRCIDCMPGLPGSKGDRGNDGRDGDIGPRGPPGPVGYPGAPGLD
GSPGVRGPPGAPGKDGLPGAPGNPGNPGKPAMIPLNLIKADKGDKGARGPPGFPGPQGRT
GPPGLQGERGLPGPRGQKGDMGPKGYSGRDGRPGSDGPVGPRGEPGFSIKGETGSPGEPG
YDGMKGEPGLPGSKGEPGRCPENITAQLKGNQGPPGERGFPGTPGINGERGDKGDKGETG
PVGYPGSTGPPGPVGNRGLPGPRGEKGDIGQMGFPGEPGRDGLRGPPGFPGMKGSKGEQG
ISVAGPQGPPGLPGYPGEKGLQGLPGKTGAPGAPGLQGIMGEKGDQGIRGLDGLSGPKGD
KGEPGPLGPPGMSGLPGMPGLQGLKGEPGQSGLPGRQGLPGYPGVKGERGITGIEGPKGF
KGSTGRPGAPGAPGMDGRPGPMGEKGDRGFPGLPGPQGLVGMPGAAGRPGDKGDIGPVGE
PGLPGPRGPPGFKGNAGLPGFPGQKGEPGPVSQKGQKGEPGVPGLRGAPGFAGQPGLPGS
KGLDGIPGQSIPGRHGEKGDMGPPGLDGLPGPQGIKGEQGVAGYSGVKGERGFPGDRGEP
GIDGLNGPQGPKGDRGFPGLEGLPGEKGDICLPGQPGFDGPKGERGYPGPIGPVGFPGQK
GELGDRGSPGPLVSIKGEKGEVGRPGPFGNMGEKGDIGLPGLDGRPGEKGDAGFPGLKGD
VGFPGQQGRKGDAGFPGIPGVPGLTVKGEKGLPGLPGKNGREGRIGLQGEKGEKGLQGLI
GQPGLAGLPGPIGPPGPKGDRGLTGAPGQPGPLGPPGRDGLNGIPGRIGEKGDRGPPGLI
GAPGQKGDRGETGLIGLTGAAGEKGDRGYDGVAGIEGPMGPQGEKGDIGFPGVPGLAGVP
GAKGQKGEAALPGAPGPKGERGPPGIPGKPGERGEPGFDGAIGIVGERGEKGDRGFEGRI
GIAGIQGEKGDRGFDGVAGLAGAQGFPGPKGEPGAPCEVTPDYLTGTLLVRHSQSVEVPS
CEAGHVKLWDGYSLLYIEGNEKAHSQDLGIAGSCIRKFSTMPFLFCDFNNVCNYASRNDK
SYWLSTSAPIPMMPVEEDRIRDYISRCVVCEAPANVIAVHSQSLSLPECPYGWSSLWIGY
SFILHTGAGAEGGGQSLASPGSCLEDFRATPFIECNGAEGTCHYFSNTLSFWLATIETNQ
QFQKPVKQTLKAGNVRDRVGRCQVCIRNT
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccacggactaaggttcgtggccacgatattagggatatggattaccatctgt
gatgcgcaatacctgagtaatagtaatagcaggtctacaaataggagtgatatttatgga
caggggtacgtaagaccttattatgaaagggattcggacactacagaaacaccagaaggc
tctacagaccgatacagcgaatacggcagacgttaccaccccagagcgaatgcaatcgaa
tcaattgacaacaggtatcgggaagacggaccactgaggggagaccaaagtggcgtttcc
gagggagagggtgactacaacaacattcaaactggttactcagatacttcgtacagtggc
ggatctggtggatataacgcaggctacgattctgcacaaggcagtgcggaaggatcaaca
cagacaccatacactcgctctgactacgaagcaagatatggttcaggaggatatggatat
aaccaaagcggatctgagaacgcgggaagggcaagtggaggaacagctagctacggatct
ggaggatctggccaatcgggagcaggaggttatggttctcggacatacagttcaagctcg
tctggcggcgccggaagagcaggggccagctatggttcgactggttatagccagacgggt
ggttcacaaaatgcctatggatcaggcggttacggttctggacaaactaacggccctgct
ggaagctatggatccgatcagtctgtaagaaattcagcgacctatgaatcccgtggttat
agctatagtaacactggaggatactcaggatctggaggatacggatctgaacaatcgggt
ggttacggatctggtagctatggctctcaaacaggtgaacaaggaagtgctggatcaagc
ttgggaagtcaagataggaactataacgatcgggacagttatgggggaagatccgacgaa
tcatcacgtaacgcctatgccagcagtccttacgctaaccgaagaccatactccagtagc
tacgatatttatgatgcccctggaagtgcgctgggaccacgtaatggtagtgaaaggtgt
atacctaaatgcttcgctgaaaaaggaaatagaggtttccaaggagcccctggtacgcct
ggcgaaaaaggtctgagaggtttcccaggtgaagaaggtaacatgggacccaaaggagaa
aaaggagattctggaccaatgggacctagaggacctaagggtaataggggtaaacaagga
ttgcctggattcccaggtataagcggaatacctggtatgcaaggaccaccaggtcaaccc
ggtatccccggtctggatggttgtaatggaacagacggagcggagggtcctaaaggatat
tcaggagaacccggaccaagaggttacgcaggaatgcctggagttaaaggtaataaggga
gagcctgcacgttgtgaaatcaatttgaaaggacagaaaggagaacctggtagagatggt
gttactggacctgccggtttaccaggaccagctggtccaataggtcctcctggaatgccc
ggtgatgtaggaccaatgggtttcagaggtccaccaggacctaaaggtcaaaaaggacag
cctggtttaggtgcagaaggacaaaaaggacagaagggtgagcctggtttgaggggaccc
aaaggtgattctggtatagccaagtgggccaaaaatggcacaactacagttgggccaaag
ggagaacctggtgcccctggtgaaagaggtgctatgggacctcccggtgagaaaggagaa
agaggtatggatggtgattatggatatccaggtcaagcaggagcgaagggagaaaagggt
ctaccaggaccatcaggacctaggggacgggacggttactctggcccaccaggtccgcca
ggacaaaaaggtgatagaggaatggaaggattgtcaggtttaccaggtcgtcaaggcttg
aaaggagaaccaggaagagagggcgcacctggattccaaggtcttcccggtccaccaggt
ccacctggtggaggaaatggaagacctggaccgcctggaccaatgggaccgaggggttat
cccggacctataggacccaagggattggatggatttaacggagaaccaggaccaatgggc
cctcctggtccgacaggaggtcccggtctgactggtagacaaggaccggaaggaccacca
ggagacaaaggagaaaagggtaacacagggctgccaggttttccaggtacagacggacgc
attggattcccaggtgaacctggaccacaggggcttcaagggcttcctggcgagagtgga
cgatcaattataggaccaaaaggagacgccggagaacctggaagagatggtgaaaaagga
caaaagggagaacgtggtttcacgggcgccagaggagcgccaggagattctctctatgga
aaaccaggaaaagacggaccaactgggccaccaggagagaagggttacccaggtcgacca
ggcataccaggtagtccgggattacctggagagaagggagatattggaggaagatgcatc
gattgtatgccaggattgccaggaagtaagggagataggggaaatgatggacgcgatggt
gacataggacccagaggaccaccaggacccgtaggttatcctggagctcctggtctagac
ggatctccaggggttaggggacctcctggtgcccccggaaaggacggattaccaggtgct
cccggaaatcctggaaatccaggaaaacctgcaatgattccacttaatttgatcaaagcc
gataagggagataagggagctagaggaccaccaggttttccaggaccccaaggaagaaca
ggacctcctggactgcaaggagaacgtggattaccaggacctagaggacaaaaaggagat
atgggtcctaaaggttattctggacgagatggacgtccgggaagtgatgggcctgttgga
ccaagaggagaaccaggttttagtatcaagggcgaaactggatctcctggagaaccaggt
tacgacggcatgaaaggagaacctgggcttcctggaagcaaaggagaacccggaagatgt
cccgaaaatataactgcccaacttaaaggaaatcaaggacctccgggagagcgcggtttt
cctggcacacctggtataaatggagaacgtggtgataagggagacaaaggggaaacagga
cctgtaggttatcctggaagcactggacctccaggtccagtgggaaataggggattgcct
ggacctcggggtgaaaaaggtgatatcggtcaaatgggattccccggagaaccgggaaga
gatggtttgagaggtccacctggtttcccaggaatgaaaggatctaaaggagaacaaggt
atatcagtagccggaccacaaggtccacctggtctacctggatatccaggagagaaagga
ttgcaaggtttaccaggaaagactggagcaccaggtgcccctggtctgcaaggaataatg
ggagagaaaggtgatcaaggcataagaggattagatggattatctggacctaaaggggat
aaaggagaacccgggccattaggaccaccaggaatgtctggtttgccaggtatgccaggt
ctgcaaggacttaaaggagagccaggtcaaagtggtttaccaggtagacaaggactccca
ggatatccaggagttaaaggagagcggggtatcacaggaatcgaaggtccgaaaggtttc
aagggatcgactggaagaccaggtgcacctggcgctccaggtatggatggaagacccgga
ccaatgggagaaaagggagatcgaggattcccaggtttaccgggacctcaaggattagtc
ggtatgccaggtgcggctggacgaccaggtgacaagggtgatatcggcccagttggtgaa
ccaggtttgccaggtcctaggggcccacctgggttcaaaggaaatgccggattaccaggt
tttcctggtcaaaagggagagccaggaccagtctcacagaaaggtcaaaagggagaacct
ggagtacctggactgagaggagcacctggatttgccggtcaacctggtttgcctgggtcg
aaaggtttggatggcattcctggacagagcattcccggacgtcatggagagaaaggagat
atgggacctcctggcttggatggattgccagggccacaaggaatcaagggagagcaagga
gtagctggatattcaggtgtcaaaggagaacgtggattccctggtgaccgcggagaaccg
ggtattgatggtttgaatggaccacagggaccaaagggagatagaggattccctggactt
gaaggattgccaggtgaaaaaggcgatatatgccttccaggacagcctggattcgatgga
cctaagggagagagaggatatcctggaccaataggacctgttggtttccctggacaaaaa
ggagaactaggagatcgtggttcacctggtcctctagtatcgataaagggagagaaagga
gaagtaggccgtccaggacctttcggaaacatgggagagaaaggtgatattggtttacct
ggtttagatgggagaccaggtgagaaaggtgatgcaggtttcccaggactgaaaggcgat
gtaggtttcccaggacaacaaggtcgaaagggagacgctggattccctggtattccgggt
gtgcctggcttaacagtgaagggagaaaagggtttaccaggtcttccaggtaaaaatgga
agagaaggtcgtattggtctacaaggagaaaaaggagagaaaggtttacaaggtctgatt
ggacaaccaggtttggccggtttaccaggaccaattggacctcctggtcctaaaggagac
agaggattaacaggagcaccaggacaacctggaccacttggacccccaggaagagacgga
cttaatggaatacccggaagaattggagaaaagggagaccgtggtcctccaggtttgatc
ggggcccctggccagaagggtgatcgaggtgaaacaggtttgatcggtctaacaggcgct
gccggcgagaaaggtgatcgaggttatgatggtgtggctggtattgagggaccaatggga
ccacaaggagagaagggagatatcggtttccctggagtaccaggactggctggtgtacca
ggagcaaagggacaaaagggagaagctgctttacctggcgcgcctggaccaaaaggagaa
cgcggtcctccgggtattcctggaaaaccaggtgagcgtggtgaaccaggttttgacgga
gctattggaatagtgggagagagaggtgagaaaggagaccgtggattcgaaggaagaatc
ggtatagccggtatccaaggagaaaagggagacagaggattcgacggtgttgctggttta
gctggtgctcaaggttttcccggtccaaagggagagcctggcgcgccttgcgaggttaca
ccggactacttgactggaacattattggtgagacacagccaaagtgtggaagtaccatct
tgcgaagcgggacatgtcaaattatgggacggttattccctgctctatatcgaaggaaac
gaaaaagctcacagtcaagatttgggaattgctggatcttgtataaggaaattctcaacc
atgccattcctcttctgcgacttcaataatgtctgtaactatgccagcagaaacgacaaa
tcttactggttatctacaagtgctccgattccgatgatgccagttgaagaggatagaatc
cgagattatatctctagatgtgtagtttgtgaggcacctgctaatgtgatagcagttcac
agccaatctctttcactaccggaatgtccctatggatggagttcgttgtggattggatat
agtttcatattgcatactggagctggtgctgaaggtggtggacagtctttggctagtcca
ggttcttgtctcgaagatttcagagcaactccgttcatagagtgtaacggtgctgaagga
acatgtcactatttctctaatactctcagtttctggctggcgaccatcgaaaccaaccaa
caattccagaagccagtaaagcagactctgaaagcaggaaacgtcagagatcgtgtaggt
agatgtcaagtctgcatcagaaacacctag
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