Coccinella septempunctata (seven-spotted ladybird): 123311139
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Entry
123311139 CDS
T07873
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset04512
ECM-receptor interaction
cset04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123311139
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123311139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cset04147
]
123311139
00536 Glycosaminoglycan binding proteins [BR:
cset00536
]
123311139
Exosome [BR:
cset04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123311139
Glycosaminoglycan binding proteins [BR:
cset00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123311139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123311139
NCBI-ProteinID:
XP_044750864
LinkDB
All DBs
Position
4:1533440..1563901
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AA seq
1864 aa
AA seq
DB search
MTLRLGYCRAFALGVYFVFTIVHHVEALRGCGGCANALNAYGGCNCSGIKGRPGAPGLPG
SPAPPGIYGDIGFPGPDGPKGEKGMAGEIGGQGELGPRGDDGLRGLSGTPGFPGNEGEPG
FSGPAGLDGCNGTDGSPGSRGLPGSPGRRGTTGPDGVQGPPGEPGEGGGNSIGTKGEPGV
PGYDGRQGPEGPRGPMGSQGYRGTPGIQGITGEAGPWGPQGDRGDYTKGVAGEPGKAGDT
GPAGEPGESPENELRILPISQSLRGRRGDRGEKGEIGPRGIKGQVGSKGYSGVPGLKGSR
GLPGDEGYEGPRGKDGKEGPKGQPGEKGDKGAPGYAGIPGTDGEKGEPGEHGPQGRPGIQ
GIEGPKGAYDPTLDKIVPGVEGPQGPIGLPGNRGMAGIPGMPGTPGPQGPAGEPGPPGKI
GQPGKKGLTWKGEHGDRGTPGNPGRTGPPGPPGPVGRAGDKGFRGEDVVGPAGEPGMPGI
PGIAGLRGERGDVGLTGPKGFPGIGKEMTGPPGEPGPRGFPGLHGDDGIPGFDGINGVKG
KRGDDCGVCRPGLPGVKGEKGVSGRPGYPGPVGFVGLPGPRGLKGTPGKAGIAGPVGLEG
SAGSPGVQGLPGADGPDGRLIFPAPGQTEAAEVGDKGYPGFMGNDGKMGEPGPLGPTGLQ
GNKGEQGAPGEDGYFGRDGSPGRAGPRGPKGFAADKTREELIGDKGKRGIPGNKGEMGDK
GLKGATGDAIGKLVRLRGDKGFPGLPGVPGIDGFKGLRGFKGDLGARGNLGYPGPQGRSI
PGPQGLKGYPGIPGDRGPQGQPGIDGKTGEMGSPGILGLKGSRGSPGLAILHGEEGPNGL
PGPKGQPGDFGFDGFPGRDGYPGIKGEKGPKGAPGIAGAPGLAGMKGQLGDVRRGPRGQD
GLNGSIGERGAPGEAGPDGPDGWQGPVGAPGSKGDPGFPGLHGAPGDEGEAGFPGHQGYV
GSAGLPGQTGARGDMGFRGNRGAPGPQGLLGQNGYKGQRGDKGLRGYEGLEGDPGLPGPR
GDQGQPGSKGARGDSSFSGPKGEPGIPGMVGPPGYDGPPGLPGTPGLPGSKGYDVFGPDG
FKGMSGEPGLPGRNGAIGLKGERGEIGVEGLPGQIGDKGFKGYAGSSGLDGLPGIKGEIG
DRGFRGIPGRKGERSPDGEPGQLGRPGLPGDVGPPGITGPPGSPGLKGDKGLPGLPSFGT
VEPGEMGDTGIHGPKGIKGIRGDQGYPGQMGRRGERGDDGFKGLRGEPGFPGLKGERGRD
GLAGEPGLPGQNPEPGDRGDPGLDGFEGPPGKTGQKGAPGELGDDGYRGAPGIPGISLQG
PKGMRGNEGFPGPQGAIGMEGFPGKDGLHGMPGEKGMQGDYGLPSFNSKGQKGEVGFRGP
VGFRGEKGQRGDQGFEGRPGFSGRRGNKGLRGPKGYPGATGINGFNGMKGEPGDWFTDIF
PGAPGDQGLPGFDGRKGLPGFPGRPGLQGRKGEKGFRGDIGFDGLPGLKGIKGERGDAGL
QGAVGIRGLPGQKGPRGDPAPSPPGPRSRGFYFTRHSQSEQIPICPRDTIKLWDGYSLLH
IMGDAKAHGQDLGAPGSCLRKFNTMPYLHCNLNDVCNYAQNNDYSYWLSTTEPMPATMTP
IPSPEVARYISRCSVCEAPTRIIAIHSQTTAIPQCPSGWDDLWIGYSFIMHTDANAEGAG
QSLVSPGSCLEEFRPKPFIECHGHGRCNYFATATSYWLATIEDNNMFKKPRQETLKAGYL
TSRISRCSVCIRRRYNVVASNPEPRLPPPEVRLPPNRYPERRPVQPSNTGRGYDSRENEV
IGYQRGPSRYPERRPSPASSATYYNPYRSAYDRNNRNLQPGRRIRPGMRRHKKHTTKQVI
QNNV
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcggctcggttactgccgggcgtttgccctcggtgtttatttcgtttttacg
atagtgcatcatgtcgaggctctgcgcggctgtggtggttgcgccaacgccctaaacgca
tatggaggatgtaattgctctgggattaagggtagacctggagctcccggtctgccaggt
tcaccagctccacctggcatttacggagatataggtttcccaggaccggatggacccaaa
ggtgaaaaagggatggccggagaaattggtggtcaaggagagttgggaccaaggggagat
gacggacttcgaggactgtcaggaactcctggatttcctggtaacgaaggagagccaggt
ttctctggaccagctggtttagacgggtgtaacggtaccgacggctcaccaggttcacga
ggactccctggatcccctggtagaagaggcacgaccggtcccgacggggtgcaaggtcca
ccaggtgaacctggagaaggtggaggaaattctatcgggactaaaggtgaacctggagtc
ccagggtatgatggaaggcaaggaccagaaggaccgagaggaccgatgggctcacaaggt
tacagaggaacgccgggaatacaaggaataactggagaggctggtccttgggggccgcaa
ggtgaccgtggagattacacgaagggagtagctggtgaaccgggaaaagcaggggacact
ggtccagctggtgaacccggagaatctccagaaaatgagttgaggattctaccaataagt
cagtctcttcgaggtagacgcggtgatcgtggagaaaagggagaaataggaccgagggga
atcaaaggacaagttggttccaaaggatattcgggagttccaggtctgaaaggatctcgt
ggcttgcccggagatgaaggatatgaaggtcccagaggaaaagatgggaaagaaggacca
aaaggtcaacccggagagaaaggcgacaaaggagctcccggatacgcgggaatacctgga
acggacggagaaaaaggtgagccaggagaacacggtccacaaggtcgtcctggaattcaa
ggaatagaaggacctaagggtgcctacgatccaacgcttgataagatcgtaccaggtgta
gagggtcctcagggtcccatcggtctccccgggaacaggggcatggcaggtattcccggc
atgccaggaacgccaggtcctcaaggacctgctggagagcccggtcctcctggtaaaatt
ggtcaaccaggtaaaaaaggattaacttggaaaggggaacatggtgatcgtggtacaccc
ggaaaccctggaagaacaggaccacctggtccgccagggccagtcgggcgagcaggtgac
aaaggtttcagaggtgaagatgttgtcggtcctgccggggagcctggcatgccaggaata
ccgggaatagcaggattacgtggcgagagaggagacgttggtttgaccggacctaaaggt
tttcctggaataggtaaagaaatgaccggaccaccaggagaacctggaccaaggggattc
ccaggattacatggagatgacggaattcctggattcgacgggataaacggagtcaaagga
aagagaggagacgattgtggtgtttgccgcccaggtctacctggtgtgaagggtgaaaaa
ggtgttagtggacgtccaggataccccggccccgtaggattcgtaggtttaccagggcca
aggggcctaaaaggtaccccaggaaaggcaggcatcgcgggacctgttggtttggaaggg
tctgcaggttctccaggagtacaagggctgcctggtgcagatggaccggatggaagattg
atttttcccgctccaggacaaacggaggctgctgaagtaggggataaaggttacccagga
tttatgggcaacgacggaaaaatgggtgaacctggacctctcggtcccactgggttacaa
ggtaataagggcgaacaaggggcgcccggagaagatggatactttggaagagatggatca
ccaggaagagctggtcccagaggacccaagggattcgctgctgataaaaccagagaagaa
ctaattggtgacaaaggaaaacgtggaatacctggaaataaaggtgaaatgggagataaa
ggtttgaaaggagcaacaggagatgcgataggtaaattggtacgtctgcgtggagataag
ggattcccaggtttgccaggagtgccaggtattgacggattcaaaggtttgagaggcttc
aagggagatcttggagcaagaggtaacttgggttaccctggacctcaaggaagaagcatt
cctggaccacaaggtttgaaaggttatcctggtattcctggagataggggcccccaagga
cagcctggtatagatggaaaaactggagaaatgggaagtccaggaatactagggctaaag
ggtagtcgtggaagtcccggtctagcaattctacatggagaagaaggtccaaacggcctt
ccaggaccgaagggacaaccgggcgattttggattcgatggttttcccggtagagacggc
tatccgggaatcaaaggtgaaaaaggacccaagggagctcccggcatcgctggtgcacct
ggactggctggcatgaaaggtcaattgggtgatgtacgaagaggaccacgcgggcaagat
ggactcaatggaagcataggagaacgcggtgcacctggtgaagctggacctgatggccca
gacgggtggcaaggaccagtaggtgcacctggatctaagggagacccaggttttcctggc
cttcacggtgctccaggagatgaaggcgaggcaggatttcccggtcatcaaggatacgtt
ggaagcgctggattaccaggtcaaaccggagctagaggtgatatgggattccgtggaaac
agaggcgcgccaggtccgcaagggttactcggacaaaacggttacaagggtcagaggggt
gataagggattacgaggatatgaagggttagaaggagatcctggcttgccaggaccaaga
ggagatcaaggacaaccgggttctaaaggtgcacgcggagattcatctttcagtggacca
aaaggtgaaccaggaattccggggatggtagggccacctggttatgatggacctcccgga
ctacctggaacaccgggtttgccaggttcgaaaggatacgacgttttcggtccagacgga
ttcaagggaatgagcggagaacctggcttacctggacgcaacggagcaattggtttgaaa
ggagagagaggagagattggagttgaaggattgcccggacagataggtgacaaaggtttc
aaaggatacgcaggatcgtctggattggatggtctacctggaatcaagggtgaaattgga
gatagaggtttcagaggaatacctggaagaaaaggagaaagatcccctgacggtgaacca
ggtcaactaggaagaccaggactgcctggagatgtcggtcctccgggaattacaggacct
cccggttcccctggattgaaaggagataagggattaccaggattaccatcattcggtact
gtggagccaggagaaatgggagatactggtattcacggacccaaaggtattaaaggaatt
cggggagaccaaggatatcctggacaaatgggaagacgaggagaaagaggcgatgacggg
ttcaaaggtctcaggggtgaaccaggattcccaggtctgaagggagaaagaggcagagac
ggtctagcaggagaaccaggactgccaggacaaaatccggaaccaggtgatcgaggagat
ccgggattggacggattcgagggtccacctggaaaaacgggacaaaaaggagcaccaggt
gaactcggagacgacggttatcgtggagcacctggaattccaggaataagtttacaagga
cccaaagggatgagaggaaacgaaggatttccaggtcctcaaggagcgataggcatggag
ggcttccctggcaaagacggtttacatggtatgcctggtgaaaagggtatgcaaggagat
tacggattgccatcgttcaactccaaaggacaaaagggtgaagtaggtttccgtggaccg
gtgggattcagaggggaaaaaggacaacgaggtgatcaaggtttcgaaggaagaccaggg
ttctcaggacgaagaggaaacaaaggtctgcggggtcctaaaggttatcccggagctact
ggaatcaacggattcaacggaatgaagggtgaaccaggtgactggttcacagatatattc
ccaggcgcaccaggagatcagggtctgccaggtttcgacggacgaaaaggattaccaggt
ttccctggacgacccggtttgcagggaagaaagggtgaaaaaggcttcagaggtgatatt
ggtttcgacggtttacctggattgaagggtatcaaaggagaaagaggggacgcgggtttg
caaggagccgtgggtataagaggtcttccaggacagaaaggaccgagaggagatccggcc
ccgtcaccaccaggtccaaggagtaggggattctacttcactaggcattcccagtcggag
cagattcctatttgtccaagagatactataaaactctgggatggatactctttattacat
ataatgggagatgcgaaggcacatggacaagatttaggtgctccaggaagttgtctaaga
aaattcaatactatgccatatttgcattgtaatctgaatgatgtctgtaactacgcacaa
aacaatgactacagttattggttatcgacgactgaacctatgccggctacgatgaccccc
attccatctccagaagttgccagatatatatcgagatgttccgtatgtgaagcaccaacc
agaatcattgcaattcatagtcaaactacagcgattcctcagtgcccaagtggatgggac
gatttatggattggatacagtttcataatgcacactgacgccaacgctgagggagctgga
caatctttggtatctccaggttcgtgccttgaagagttccgacccaagcctttcatcgaa
tgccacggtcacggtagatgtaactatttcgcgaccgccacctcctactggctggccacc
atcgaagacaacaacatgttcaagaaacccaggcaggagaccttgaaggccggatacctg
acgtccaggataagcagatgctccgtttgcatcagaaggagatacaacgtcgttgccagc
aatccagaaccgcgtttgcctcctccagaggtgaggttaccccctaaccgatatccggag
aggaggccagttcagccttccaacactggtcgaggctacgattccagagagaacgaagtc
atagggtaccagaggggaccgagcaggtatccagaaaggaggccttctccggctagcagc
gcaacttactacaatccgtaccgcagcgcctacgaccggaataataggaatctacaacca
ggaaggcgtatcaggcccggaatgaggagacataagaagcataccacgaagcaagtcatc
cagaataatgtgtga
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