Coccinella septempunctata (seven-spotted ladybird): 123312117
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Entry
123312117 CDS
T07873
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123312117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123312117
Enzymes [BR:
cset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123312117
Spliceosome [BR:
cset03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123312117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_19
AAA_22
Flavi_DEAD
AAA_30
SLFN-g3_helicase
nSTAND3
nSTAND_NTPase5
SRP54
TsaE
ResIII
Motif
Other DBs
NCBI-GeneID:
123312117
NCBI-ProteinID:
XP_044752284
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All DBs
Position
4
Genome browser
AA seq
890 aa
AA seq
DB search
MSSEGKRKKKRYETSSESEDIDSAEEARRKDLKERDEFADRLKKRDEHKTRNIVQASERR
AYEEAAKRLKLENEDREKIIPSLRIKSRRKYLEKRKEDKIMELEADIADDEYLFEEEILT
ERERKERQHKKELLKLAQEHEKARELERIQRYHMPKDMGVSDYVEVDELEKMPLSEQKKW
EKDQMSSAVFRFGARDAVKKDEYELLLEDQIEFIQALQLPGTKQEKKEPEQTEYQKKRLD
IEQTKISLPVYPFRDDLIQAVRDHQVLIIEGETGSGKTTQIPQYLHEAGFTNDGKKIGCT
QPRRVAAMSVAARVAQEMNVKLGNEVGYSIRFEDCTSERTIIKYMTDGTLHREFLSEPDL
QSYSVMIIDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATLDAQKFSEFFDDAPIFR
IPGRRFPVDIYYTKAPEADYVDACVISVLQIHATQPLGDILVFLTGQEEIESCQELLTDR
TRRLGSKVKELIVLPVYANLPSDMQAKIFEPTPPGARKVILATNIAETSVTIDNIIYVID
PGFAKQNHFNSRTGMESLMVVPISKASANQRAGRAGRVAAGKCFRLYTAWSYKHEMEDNT
IPEIQRINLGNAVLMLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHHGELTKL
GRRMAEFPVDPMMAKMLLASEKYKCSEEIVTIAAMLSVNGALFYRPKDKSIHADTARKSF
NHIGGDHLSLLNVYNQWRDSDYSTQWCYDNFIQHRSLRRARDVREQLVGLMQRVEIEMVS
NPTEIDNIKKAITAGYFYHIARLSKGGNYKTVKHNQTVTIHPNSALFEDLPRWLLYHELV
FTSKEFVRQVIEIESKWLLEVAPHYYKPRELEDSTNKKMPKTVGRSTRTE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgaaggaaaacgtaagaaaaagcgctatgagaccagctcagaatctgaagat
atagatagtgcagaagaagcgcgtcgtaaagatttgaaggaaagggatgaatttgctgat
cgtttaaagaaacgggatgaacataaaacaagaaatattgtacaggcctctgagagacgc
gcatatgaggaagctgctaaacgtcttaagttggaaaatgaagatcgagaaaagattata
ccatcccttcgaattaaatccagaagaaagtatctggagaaaagaaaagaagacaaaatt
atggaactggaggcagatattgcagacgatgagtatttgtttgaagaagaaatcttgact
gaaagagaacgaaaagaaaggcagcataaaaaggaactgttgaagttggcgcaagaacat
gaaaaggcaagagaattggaaaggatacaaagatatcacatgcccaaggatatgggcgtt
tcagactatgtggaagtggatgaacttgaaaaaatgcccctgtctgaacagaaaaaatgg
gaaaaagatcaaatgtcttcagcagtgttcagatttggagcaagggatgctgtgaagaag
gacgaatatgaacttcttctagaggaccaaattgaattcatacaagctctgcaattacct
gggacaaaacaggaaaaaaaggaaccagagcagacagaatatcagaagaaaagattagat
atcgaacaaactaagataagtttaccagtttatccattcagggatgatttaattcaagct
gtaagggatcatcaagttctcattatagagggggagacaggatccggtaaaactactcaa
attccccaatatcttcatgaagcaggcttcacaaacgatggtaaaaagattggatgtact
caaccgagaagggtagcagcgatgtctgtagctgccagagtagcccaagaaatgaacgta
aagttaggcaatgaagtgggttattccattcgtttcgaagattgcacatctgaaagaaca
attataaaatacatgacagatggtacattacatcgtgaatttctgtcagaacccgatcta
cagtcctacagtgtgatgataatcgatgaagctcacgaaaggaccctccacacagatatc
ttgttcggtttggtgaaagacatagccagatttcgtccggacttgaaactcctcatttcg
agtgcaacactagacgctcagaaattttcagagtttttcgatgacgctcctatattcagg
atacctggacgtagatttcccgtcgatatttactacacgaaagccccggaggctgattat
gtagacgcttgcgtgatatcagttttacagatacacgcaacgcaacctttaggggacatc
ttggtgttcttaacgggtcaggaggaaattgaaagttgtcaggagttactgacagatagg
acgagacggttgggatctaaagtgaaggagttgatagtgctgccggtatacgccaatcta
ccgagcgatatgcaggcgaagatattcgaaccgacgcctccgggagctaggaaggtcatc
ctggccacgaacatagcagaaacgtccgtaacgatagacaacataatttacgtgatcgat
cccggattcgcgaaacagaaccatttcaactccaggacgggaatggagagcttgatggtg
gttccgatctccaaggcgtccgcgaatcagagagcgggcagagccgggagggtggccgcc
ggcaaatgtttcaggttgtacacggcctggtcgtacaagcacgagatggaggacaacacc
ataccggagatccagaggatcaatttgggcaacgcggtgctgatgctgaaagctctcggg
atcaacgatctggtgcatttcgactttctggatcctccccctcacgagaccctggtcttg
gccctggagcaactgtacgctctgggggccttgaatcatcacggcgaactgaccaagctg
ggcaggaggatggcagagttcccggtcgaccccatgatggccaaaatgttattggcttcc
gagaagtacaaatgttcggaggaaattgtaacgattgcagcgatgctttcggtgaacggc
gcgttgttctataggcccaaggataagagtatacatgcagatacggcaagaaagagtttc
aaccacatcggaggagatcatttgagcctcctaaacgtatataaccagtggcgtgattcg
gattactcgactcagtggtgttacgataattttatacaacatagatctttgaggagagct
agagatgtgagagaacagttggtcggtttgatgcaaagagtagaaattgagatggtttct
aacccaacagaaatagataacataaagaaagcaataactgctggatatttctaccacatt
gctcgtctatcgaaaggaggaaattataaaactgttaaacacaatcagactgtcactatt
catccgaacagcgcactgtttgaagatctaccacgatggcttctttaccatgagcttgtt
ttcacaagtaaagaattcgtgaggcaggtgattgaaattgaaagtaaatggctgttggaa
gtagccccccactactacaaaccgagggaacttgaagattctacgaataagaaaatgcca
aagactgttgggaggagcacaaggactgaatga
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