Coccinella septempunctata (seven-spotted ladybird): 123312118
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Entry
123312118 CDS
T07873
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123312118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123312118
03036 Chromosome and associated proteins [BR:
cset03036
]
123312118
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123312118
Coactivators
SAGA/TFTC/STAGA complex
123312118
Chromosome and associated proteins [BR:
cset03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123312118
STAGA complex
123312118
TFTC complex
123312118
SAGA complex
123312118
SLIK complex
123312118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WDR54
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
123312118
NCBI-ProteinID:
XP_044752285
LinkDB
All DBs
Position
4:656159..660769
Genome browser
AA seq
667 aa
AA seq
DB search
MNNVITPNVSSGEDVNKSHLAAVLQILKKYNLKNTEELFKKEANISDCLENSANIQKDSN
VSSVLTGYKSDGDPETYINSYRELKGFVEDSLDIYKHELGMILYPILVHMYLELVYNGHT
EKAIALMKTFGPEQDTYYQDDLKKLALVTNKDHMNGNELTDTFKSHQFIIRMSRDTLSLL
KRYLNDKKASVLLNIVQEHLYFDMYEGVARNKGQIDATSGAVGGEAKRQDNKIKVFYGIP
KAPDIQTLAAPIEEEDGEGDQENPEKPKKKKAKKDPLFSKKTKSDPNAPPPDRIPAPDLK
DNDKLEKVKALREASRRVTLGPETLPSVCCYTLMNTSQTVCCAEITEDSSMLAVGFNDAI
IKVWSLVPQKLKALKSAQQLQEVNIDAEDLMVRIMNERSGEICRTLPGHAGPVYGVSFSP
DRTLLLSCSEDSTIRLWSLQIWTCLVVYKGHLFPVWDVKFSPLGYYFATASHDRTARLWA
TDHYSPLRLFAGHFSDVDCLQFHPNSNYVATGSSDRRVCLWDCTTGNHVRLMTGHKAPIH
SLAFSVCGRFLASSGADCRVLVWDLSHGHLVAELTGHEKPVHALTFSRCGNILCSGGLDF
SLKVWDFSKITEDISSEEVNVSHNPDVKTGEQYLLRDFATKSSPLIHLHFTRRNLLLAVA
TFEGANP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgttataactccaaacgtttcttcgggagaagacgttaacaaatcgcatcta
gctgctgtgttacaaattctgaagaaatacaatttgaagaatactgaagagctattcaag
aaagaagctaatataagtgattgtttggagaactcagcgaatatacagaaagactccaat
gttagtagcgtattgactggatataaaagtgatggagatcctgaaacatacatcaattct
tatcgcgaattgaaaggttttgttgaagattccctagatatctataagcatgaattagga
atgattttataccctattcttgtacacatgtatttggaattggtatataatggacataca
gagaaagctatagcattgatgaagacatttggacctgagcaagatacttattaccaagat
gatttgaaaaagttggcattggtaacaaacaaggatcatatgaatggaaacgagctcact
gatacatttaaatctcatcagtttatcatcagaatgtcaagagatacattgtcattactg
aaaagatatttaaacgataaaaaagcatcagttttattgaacattgttcaagaacatctt
tattttgatatgtatgaaggtgttgcaaggaataagggtcagatagatgcgacttcgggc
gctgtgggtggagaagctaagagacaagataacaaaatcaaagttttctatggcattcca
aaggcaccagacatacaaactttggcagctccaattgaggaggaagatggcgaaggagat
caagaaaatcctgagaaacctaaaaagaagaaagcgaaaaaagatccactgttttctaaa
aaaacaaagtctgacccgaacgctcctcctccagatagaataccagccccagatctgaaa
gacaatgataaattggaaaaagtgaaggcgcttcgtgaggcatccagaagggttacccta
ggtccggaaaccttaccgtctgtctgctgttatacactgatgaacacaagtcaaacggtg
tgttgtgcggaaataactgaagattccagtatgttagcggtgggtttcaatgatgcaatc
atcaaggtttggagtttggtaccgcaaaaactcaaggcgctcaaatcagctcagcagtta
caggaagtcaatatcgacgctgaggaccttatggtgagaatcatgaacgagagatctggt
gaaatctgccgtaccctaccagggcacgcaggtccggtctacggagtatccttttcaccg
gatcgtaccttgctcctgagttgttcggaagattcgacaatccgactgtggagtcttcag
atatggacgtgtttggtggtgtacaagggacatctgtttcccgtgtgggacgtgaaattc
tcaccgctggggtattatttcgccacggcttcccatgataggaccgcgaggctgtgggcc
acggatcactactctccgctgagattattcgctggacacttttcggacgtcgattgtctc
cagtttcaccccaactcgaattacgtggcgacgggatctagcgacagaagggtctgtctg
tgggattgcaccacgggcaaccacgtcaggctgatgacgggccacaaggccccgatccac
agtctcgccttcagcgtttgcggaaggttcctggcctcctcgggggccgattgcagggtc
ctcgtttgggacctgtcccacggtcatttggtggccgagctgaccgggcacgagaaacct
gtgcacgcgttgacgttcagcagatgcggcaacatcctgtgttcgggagggttggacttc
tccctcaaagtctgggatttcagtaagatcacggaagatattagttcggaggaggttaac
gtatcgcataaccccgacgttaagactggcgagcagtatttgctcagggatttcgccacc
aagagtagtcccttgatacacttgcatttcaccaggaggaatctgttgttggctgttgcg
acttttgaaggcgcgaatccctaa
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integrated database retrieval system
