Entry |
|
Name |
(RefSeq) DEAD-box helicase Dbp80
|
KO |
|
Organism |
cset Coccinella septempunctata (seven-spotted ladybird)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cset00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123312499
03015 mRNA surveillance pathway
123312499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cset03019]
123312499
Enzymes [BR:cset01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123312499
Messenger RNA biogenesis [BR:cset03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123312499
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
4:38347712..38420575
|
AA seq |
469 aa
MAQKIDWSKYALEQDALNSKIEKIKVKDDTKNADSESDEGPDEVNLAEASLLKKLVRKGL
VTNKNDIEIQRQNPNSPLHSVKTFEALNLNPNLLKGIYEMGFNAPSKIQETALPTLLAVP
SQNLIAQSQSGTGKTAAFVLAMLSKVDVSKKYPQILCLSPTYELAIQTGEVAAHMAKFCP
EIEMKYAVRGEEVPSGTKLTEHIIIGTPGKVMDWALKYRHFNLQEITVFVLDEADVMIAQ
QGHQDQCIRIHKKLSSKCQMMFFSATYNQKVMEFAKTIVQNPIIIRLKREEESLDNIQQY
YVNCGSKMAKYNALTNIYGTVGVGQAIIFCQTKKTANWLSEKMSRDGHAVAVLTGDLSVE
QRINVLDRFRNGQEKVLITTNVLARGIDVEQVTIVVNFDLPIDLNGQADCDTYLHRIGRT
GRFGKSGIAINLVDSPESLRICKSIEEHFNRKIHFLNADDSDEIEKIGS |
NT seq |
1410 nt +upstreamnt +downstreamnt
atggcacaaaagatagattggtccaaatatgctctcgagcaggatgccttaaattcgaag
atcgaaaaaattaaagtaaaagatgacacgaaaaatgctgattccgaatctgatgaaggt
ccggatgaagtgaatctggctgaagctagtctgttgaaaaagcttgttagaaaaggatta
gttacaaataaaaatgatatcgaaatacaacgtcagaacccaaattcaccactgcattcc
gttaaaacctttgaagctttaaatttaaatccaaatttgctgaaaggaatatatgagatg
ggattcaatgctccctccaaaatacaagaaacagcacttccaacattgttggcagtacct
tcacagaatttgattgcacagtctcagtctggtacaggtaaaactgcagcatttgtttta
gctatgctcagtaaagttgatgtatctaagaagtatccacagatactatgcctttctcct
acctatgaattagctattcagactggagaagtagctgcacatatggccaagttttgtcca
gaaattgaaatgaagtatgctgttcggggagaggaagttccaagtggtacaaaattaact
gagcacatcataattggtactccagggaaggtaatggattgggctctaaaataccgtcat
tttaatctccaggaaataacagtgtttgtgcttgatgaagctgatgttatgattgcacag
caaggtcatcaggaccagtgtataagaatacacaagaagctcagctctaaatgtcagatg
atgtttttctctgctacttataatcagaaagttatggaatttgccaaaaccattgttcaa
aaccctataatcattaggttgaagagggaagaagagagtttagataatattcaacaatac
tatgtgaattgtggtagtaaaatggctaaatacaatgctcttactaatatatatggaact
gttggtgtaggtcaagcaattattttttgccagacaaaaaaaactgcaaattggttgtca
gaaaagatgtccagagatggccatgcagtggcagttctaactggggatttgagtgtggag
caaagaatcaatgttttggatcgtttcagaaatggccaagagaaggtattgatcactaca
aatgttttagccagaggtattgatgtcgaacaagtaacgattgtagtaaacttcgatctg
cctatagatttgaatggacaagcagattgtgatacctacctccaccgaattggtagaacg
ggacgttttggtaaaagtggaatcgctattaacctggtagattctccagaatccttgcgt
atatgtaaatctatagaagaacatttcaatagaaaaattcactttttaaatgctgatgat
tcagatgaaatcgagaaaataggatcttaa |