KEGG   Coccinella septempunctata (seven-spotted ladybird): 123312812
Entry
123312812         CDS       T07873                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
cset  Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03013  Nucleocytoplasmic transport
cset03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cset00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123312812
  09122 Translation
   03013 Nucleocytoplasmic transport
    123312812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cset03019]
    123312812
   03041 Spliceosome [BR:cset03041]
    123312812
Messenger RNA biogenesis [BR:cset03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     123312812
Spliceosome [BR:cset03041]
 Complex C
  Other components
   EJC/TREX
    123312812
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123312812
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Tricorn_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st RMC1_N DSE1_N Beta-prop_WDR35_TULP_N PAC11 CFAP251_N WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_EIPR1 TRM82_WD Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_ELP1_1st Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_DCAF12 PD40 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 123312812
NCBI-ProteinID: XP_044753252
LinkDB
Position
1
AA seq 320 aa
MYQDKIEELQSYFKTHSKSKEYLGHSAKVHSVGWSCDGKRLASGSFDKSVCIYTLDRDRL
NKEVTFKGHSGSVDQLCWHQSHPDLLSTASGDKSIRIWDTRVQKCVTTINTKGENINIAW
SPNGNCIAVGNKEDLVTFIDARTHKIEAEEQFYFEVNEISWNNTSDLFFLTNGLGCVHIL
SYPELKRQHILKAHPGTCICIEFDPTGKYFATGSADALVSLWDIEELACKRVFTRMDWPV
RTISFSHDGQLLASASEDLLIDIGFVETGDKIADISVEAATFTVAWHPSMYLLAYACDDK
DTYDRKRDAGSLKVWGFQVD
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtatcaagataaaatagaggagctccaaagttatttcaaaactcattccaaatccaaa
gagtatttagggcactcagcaaaagtgcattcagttggatggagttgtgatggcaagaga
cttgcttcaggatcctttgataaatcagtttgtatttatacattagatagggacagactg
aataaagaagttactttcaaagggcacagcggatcagtcgatcaattatgttggcatcag
tcgcatccagatctattaagtacagcaagtggtgacaaatccattagaatatgggacacg
agggttcagaagtgcgtgactacaataaataccaaaggggaaaatataaatattgcttgg
tcccccaatgggaattgtatagccgttggaaataaagaagatttagtcacattcattgat
gctagaactcataaaattgaagctgaggaacagttttattttgaagtcaatgaaatatcg
tggaataacacaagtgatttatttttcttgactaatgggttgggatgtgtccatatattg
agttatcctgagttaaaacgccaacacatattgaaagctcatcccggaacttgtatttgt
attgaattcgatccaacaggaaaatattttgccactggtagtgccgatgctttagtttca
ctgtgggatattgaagagttggcatgcaaaagagttttcacaagaatggactggccagtt
cgcaccatatcattcagtcatgacggtcaacttttggcttccgcttctgaagaccttttg
atagacattgggtttgtggagactggtgataaaattgcagatatttctgttgaagctgca
acattcactgttgcatggcatccctctatgtatcttttagcttatgcgtgtgatgataag
gacacttatgatcgtaagcgtgatgctggcagtttgaaagtctggggatttcaagttgac
tga

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