Coccinella septempunctata (seven-spotted ladybird): 123312998
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Entry
123312998 CDS
T07873
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03020
RNA polymerase
cset03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123312998
09124 Replication and repair
03420 Nucleotide excision repair
123312998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123312998
03400 DNA repair and recombination proteins [BR:
cset03400
]
123312998
Enzymes [BR:
cset01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123312998
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123312998
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123312998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123312998
NCBI-ProteinID:
XP_044753587
LinkDB
All DBs
Position
5:35658354..35663948
Genome browser
AA seq
1175 aa
AA seq
DB search
MYEQDDDRYEEEETEEISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPVIDLQAEAQHTSGEIENTTHYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVREGEDPIETQHQKTFIGKIPIMLRSTFCLLNGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAMKDGKYAYKSEIRSCLEHSSRPTSTLWVNMM
ARGGQAIKKAAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLIKEVRMYAQ
KFIDKGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIANATKIFVNGCWVGIHRDPEQLMSTLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKKHIDMLKERDYNHYGWQNLVSYG
VVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRISEQEEQFEKPTRQTCQG
MRNAIYDKLDDDGIIAPGVRVSGDDVIIGKTMTLPERDDELEGATKKYSKRDASTFLRNS
ETGVVDQVMLTLNADGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPLQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNLCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVT
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaacaagatgacgaccgttatgaagaggaagaaactgaggaaatcagttcggag
ttatggcaagaggcctgttggattgttatcaattcctactttgacgagaagggtttggtt
cgacaacaattggatagttttgacgaatttatacagatgtctgttcaacgtatcgttgag
gactccccagtgattgatttacaagctgaagcccagcatacctctggggaaattgagaat
actacccactatttgcttaaatttgagcagatttatctttcaaagcctacacattgggag
aaagatggggctccatcccctatgatgccaaatgaagctcgtttgaggaatttgacttat
tctgctcctttgtatgttgacattaccaaaactatagtgagggagggtgaagaccctatc
gaaacacagcatcagaaaacatttataggtaaaattccaataatgttgcgttccacattc
tgtctattgaatggactcactgatcgtgatttaactgaattgaatgaatgtcctttggat
cctggtggctatttcatcataaatggttctgaaaaagtactaattgctcaagaaaagatg
gccactaatactgtttacgtgtttgccatgaaagatggaaagtatgcttataaatcagaa
attcgttcgtgtttggaacatagctcaagacccacgtcgactttgtgggtcaatatgatg
gctagaggtggccaggcgattaaaaaggcagctattggtcaaagaattatcgcaattttg
ccttatatcaaacaagaaattccaataatgattgtattcagggctcttggttttgtggcg
gatcgtgatattcttgagcacatcatttatgattttgaagatccagagatgatggaaatg
gtgaaaccatcactggacgaagcctttgtcatacaagaacaaaatgttgctttaaatttc
ataggttcgagaggtgcccgacctggtgtcacaaaagaaaagcgtatcaaatacgccaga
gaaattttacagaaagaaatgttgcctcatgttggtgtttctgatttttgtgaaacaaag
aaggcatactttttgggttacatggttcaccgacttcttctagccgctcttggtagaaga
gagttagatgatcgtgatcattacggaaataaaagattagatttggctggtccattactg
gcctttttattcagggggttatttaaaaatttgataaaggaagtgagaatgtacgcgcag
aagtttattgacaagggaaaagacttcaatcttgatctagccattaaaacgaaattaata
actgacggtttgcggtactctttggccactggtaactggggcgatcagaaaaaggcccat
caagctcgtgctggagtatcacaggtgttgaataggttaacttttgcgtcaacgttgtct
catcttcgtcgtgtcaactctccaattggaagagatggtaaattggccaaaccacgtcag
ttacacaacaccctatgggggatgatctgtcctgctgagactcctgagggagccgctgta
ggtttagtaaaaaatctggctttaatggcttacatatctgtcggttcgcaaccgtcgcca
attctcgagttcttggaggagtggtcgatggaaaatctggaagaaatcgcaccttccgcc
atcgcgaatgccactaaaatctttgtcaatggatgttgggttggtatacacagagatccc
gaacaattgatgtccactttgaggaagctcagacgtcagatggacatcatcgtatctgaa
gtttctatgattcgtgatattagggatagggagataagaatctacacagacgctggtaga
atctgtaggccgcttctaatcgtggaaaatggaagtttgttgttgaaaaagaaacatatt
gacatgttgaaagaaagagattacaatcattacggttggcagaaccttgtttcttatggt
gttgttgaatatatcgatacgttggaagaagaaacggtcatgattgcgatgtcccctgat
gatttgagacaagaaaaagaatacgcttattgtacgacttatacacattgtgaaattcat
ccagccatgattttgggagtttgcgcttcgattatacctttcccagatcacaatcagagc
cccagaaatacctatcagagtgctatgggaaaacaagccatgggcgtttatatcacgaat
ttccacgtgcgtatggacactttggcccatgtcctctactatccacataaaccgttggtt
acaacccggtctatggagtatctacgtttcagagagttgcctgcaggaatcaatagtatt
gtagctatcgcttgttacactggttacaatcaagaagattctgtcatcttgaacgcatcc
gcagtcgaaaggggatttttcagatctgtgttctatcgatcttacaaagattctgaatcg
aaaagaatatcagaacaggaagaacagtttgagaaacccacaagacagacgtgtcagggt
atgaggaacgctatatatgataagttggacgatgatggtatcatagcacctggtgttcgt
gtatctggcgatgatgtgataataggaaagactatgaccttacccgaaagagacgatgag
ttggagggtgccacgaagaaatattcaaaacgagacgcttcgacgttccttcgtaacagt
gaaacgggggtggttgatcaggtcatgttgaccttgaacgcggatgggtataaattttgc
aagatcagggtgcgatctgtgcgtatcccgcaaattggtgacaaattcgcatccaggcac
ggacaaaaagggacatgcggtatccaatatagacaagaggatatgccattcacgtgtgaa
ggactgacacccgatatcatcatcaacccccacgctatcccttcccgtatgacaattggt
cacttgatcgagtgtattcagggaaaagtatcagcgaataaaggggaaataggtgatgcg
acacctttcaacgacgcggtgaacgtacaaaagatttccacccttcttcaagaatacggt
tatcaacttagaggaaatgaggttatgtataatggtcacaccggtcgtaagatcaacgcg
caaattttcttggggcctacttattaccaacgtcttaagcatatggtggacgataagatc
cactctagagccaggggtccgttgcagattctagtgcgacagcccatggagggtagggca
cgtgatggtgggttacgttttggggagatggagagagattgtcagatctcccatggggct
gcgcaatttttgagggagaggttgttcgaagtttcagatccgtacagaatacacgtttgt
aatttatgcggtctgattgctatagcgaatttgaggaataatactttcgaatgtaaggga
tgcaagaacaagacgcaaatttcacaggtgaggttgccgtatgcggcaaagttgctgttc
caggagctcatgtcgatgaatattgcccccagacttatggtaacgtaa
DBGET
integrated database retrieval system
