Coccinella septempunctata (seven-spotted ladybird): 123313005
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Entry
123313005 CDS
T07873
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03020
RNA polymerase
cset03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123313005
09124 Replication and repair
03420 Nucleotide excision repair
123313005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123313005
03400 DNA repair and recombination proteins [BR:
cset03400
]
123313005
Enzymes [BR:
cset01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123313005
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123313005
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123313005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123313005
NCBI-ProteinID:
XP_044753593
LinkDB
All DBs
Position
5:35652646..35657955
Genome browser
AA seq
1175 aa
AA seq
DB search
MYELEEDQYEEDETEEISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRVVG
DSPQIELQAEPRHISGEIENPTRYTLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIRDGEDPVVTQHQKTFIGKIPIMLRSTFCLLNGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKCEIRSCLEHSSRPTSTLWVNMM
ARGGQATKKAAIGQRIIAVLPYIKQEIPIIVVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLSFLFRGLFRNLIKEVRMYAQ
KFIDKGKDFNIDLAIKPKLITDGLRYSLATGNWGDQKKAHEARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIANATKIFVNGCWVGIHRDPEQLMSTLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKKHIDMLKQRDYNNYGWQDLVSYG
AVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNYHIRMDTLAHVLYYPHKPLVTTRSMEYLRFRDLPAGINSI
VAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKSVRDQEEQFEKPTRQTCQG
MRNALYDKLDDDGLIAPGIRVSGEDVIIGKTMILPERDDELDGTTKKYSKRDASTFLRNS
ETGVIDQVMVTLNADGHKFCKIKVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSALKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQIFFGPTYYQRLKHMVDDKIHSRARGPLQVLVRQPTEGRG
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNHTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVT
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagctagaagaagatcaatatgaagaagatgagactgaggaaatcagttcagaa
ttgtggcaagaagcttgttggatcgttattaattcatatttcgatgaaaagggtttggtt
cgtcagcagttggacagttttgatgaattcatacagatgtctgttcaacgggttgtggga
gattctcctcaaatagaactacaggctgaacctcgacatatttcgggagaaatcgaaaat
cctactcgctatactttaaaattcgaacaaatctatttatcgaaacccacccattgggaa
aaagatggtgcaccttctcctatgatgcccaacgaggctcgtttgagaaacttgacatat
tctgcaccattgtatgtagatattacaaaaactgtgataagagatggtgaagatcctgtt
gtaacacaacatcaaaaaacatttattggaaaaattcccattatgttgcgttccacattt
tgtttgttaaatggactgaccgatcgtgatttaactgagttgaacgaatgccctctggat
ccaggtggatatttcatcatcaacggttcagaaaaagtacttatagctcaagaaaagatg
gcaacaaatactgtttatgtgttctctatgaaagatggaaaatatgcctataagtgtgaa
atacgttcatgcttagaacacagttcaagaccaacttctacattatgggtgaacatgatg
gccagaggtggtcaggccacaaaaaaagcagctattggtcaaaggattattgcagtctta
ccttacattaagcaagaaattccaattattgttgtcttcagagcccttggatttgtggca
gatcgtgatattctagaacacataatttatgatttcgaggatcccgagatgatggaaatg
gtgaaaccgtcactcgatgaagccttcgtcatacaagaacaaaatgtcgctttaaatttc
ataggttcgagaggtgcccgacctggtgtcacaaaagaaaaacgtatcaaatacgccaga
gaaatcttacagaaagaaatgttgcctcatgttggtgtttcagatttttgtgaaacaaag
aaggcgtactttttggggtatatggttcatcgactgcttttagcagctcttggaaggaga
gaattggatgatcgtgatcattatggaaataagagattggatttagctggtcccttactt
tcatttttgttcaggggtttattcagaaatttaattaaagaagtaagaatgtacgcgcag
aagtttatagacaagggaaaagatttcaatatcgacttggccatcaaaccgaaattaatc
accgatggtttacgttactctttggccactggtaactggggagatcagaaaaaagcccac
gaagctcgtgccggtgtatcgcaggtgttgaacagattaaccttcgcatcaacgttatct
catttacgtcgtgtcaactctccgattggaagagatggtaaattggccaaaccacgtcag
ttacacaacaccctatgggggatgatctgtcctgctgagactcccgagggagccgctgta
ggtttagtaaaaaatctggctttaatggcttacatatctgtcggttcgcaaccgtcgcca
attctcgagttcttggaagagtggtcaatggaaaatctggaagaaatcgcaccttccgcc
atcgcgaatgccactaaaatctttgtgaatggatgttgggttggtatacacagagatccc
gaacaattgatgtccactttgaggaagctcagacgtcagatggacatcatcgtatctgaa
gtttctatgattcgtgatattagggatagggagataagaatttacacagacgcgggaaga
atctgtaggccgcttctaatcgtagaaaatggaagtttgttgttgaaaaagaaacatatt
gacatgttgaaacaaagggattacaataattatggatggcaagatcttgtatcttacggt
gctgttgaatatatcgatacgttggaggaagaaacggtcatgattgctatgtctcctgac
gacttgagacaagaaaaagaatatgcttattgtacgacttatacacattgtgaaattcat
ccggccatgattttgggcgtttgcgcttcgattattccgttccctgatcacaaccagagt
cctagaaatacatatcagagtgctatgggtaagcaggctatgggcgtttacatcacaaac
taccatattcggatggacaccttggcccatgtactctattatccgcacaagcctttggtt
accacgagatccatggagtacttacgtttcagggatctaccagccggaattaacagtatt
gtggctattgcttgttacactggttacaatcaagaagattctgtcatcttaaacgcgtcg
gcggtggaaagaggatttttcaggtcagtgttctaccgatcttataaggactctgaatcg
aaaagtgtgagagatcaggaggaacaattcgagaaaccaacgcgacaaacgtgtcaagga
atgagaaacgccctatacgacaaactggacgatgacggtctaattgcaccgggtattcgt
gtgtcaggggaagatgtgataataggaaaaacgatgatccttcctgaaagggatgacgag
ctggatggtaccactaagaaatattcgaaaagagacgcttcgacattcctaagaaacagt
gaaacgggagtcatagatcaggttatggttaccctaaacgcggatggtcataaattttgt
aagatcaaggttagatctgttcggatcccacaaattggagacaaattcgcctctcggcac
ggtcaaaaaggaacttgcggtattcaatacagacaagaggatatgcctttcacgtgtgaa
ggactcacccctgatattatcatcaacccccacgctatcccctcccgtatgacaattggt
cacttgatcgagtgcatccaagggaaagtatcagcgttgaaaggggaaattggtgacgcg
acgcctttcaacgacgctgtcaacgtacaaaagatttccacccttcttcaagaatacggt
taccaactgagagggaatgaggttatgtacaatggtcacaccgggcgtaagatcaacgcc
caaattttcttcgggcccacgtactatcaacgtcttaagcatatggtggacgataagatc
cattctagagcaagaggaccgttgcaggtgctagtcaggcagccaacggaaggaaggggt
agggacggtggattgcgttttggggagatggagagagattgtcagatctcccatggggcc
gcgcaatttttgagggagagattgttcgaagtttcagatccgtacagaatacacgtttgt
aatttctgcggtctgattgcaatagcgaacttgaggaatcacacgtttgaatgtaaggga
tgcaagaataagacgcaaatttcacaggtgaggttgccgtatgcggcaaagttgctgttc
caggagcttatgtccatgaatatcgcccccagactaatggttacataa
DBGET
integrated database retrieval system
