Coccinella septempunctata (seven-spotted ladybird): 123313356
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Entry
123313356 CDS
T07873
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
cset04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123313356
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123313356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123313356
04121 Ubiquitin system [BR:
cset04121
]
123313356
03400 DNA repair and recombination proteins [BR:
cset03400
]
123313356
Enzymes [BR:
cset01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123313356
Spliceosome [BR:
cset03041
]
Complex B
Other components
Prp19 complex
123313356
Complex C
Prp19-CDC5 complex
123313356
Ubiquitin system [BR:
cset04121
]
Ubiquitin ligases (E3)
U-box type E3
123313356
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
123313356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_Vps41
U-box
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
eIF2A
WD40_like
PAS_11
Beta-prop_DCAF12
CT47
zf-Nse
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
123313356
NCBI-ProteinID:
XP_044754150
LinkDB
All DBs
Position
5:complement(24421813..24424150)
Genome browser
AA seq
501 aa
AA seq
DB search
MAFCCAISNEVPDHPVVSPSSGAVFEKRIIEKYIQENGVDPISGKEITVDELIEIKTPSI
VKPKPPSATSIPATLKLLQDEWDAVMLYSFTQRQQLQTARQELSHALYQHDSACRVVSRL
NKEVTAAREALATLKPQAGITTVPQPALAAEAAGVANQPTEQAGMSEDIIKKLQDKATVL
TQERKKRGRTVPEELSTQEQIRSFRTLASHPGLHSASVPGILALDIHSQDTSKILTGGND
RNATVFNKDTEQVIAILKGHTKKVTNVIYHPDEDLVITASPDATIRIWNVPTSQTTLLLK
VHDGPVTGLSLHPAGDYIISTSEDQTWAFSDIRSGRLLTRVQDENNIALTTAQLHPDGLI
FGTGGIDSIVKIWDLKGQNNVAQFTGHLGAITTMAFSENGYYLATAADDASIKLWDLRKL
KNFKSIQLEEGYQIKDLCFDQSGTYLAAAGTDVRIFLSKQWQELKVFNDHTAAATGVRFG
KHARFLASTSMDRTLKLYGLE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttgttgtgctatttccaacgaggttcctgaccaccctgtggtatcgccgtcc
tcgggtgcagtgttcgagaagcgtattattgagaaatatattcaagaaaatggtgtggat
cctataagtggtaaagaaatcactgtggacgaattgattgaaatcaaaacaccgtcaatt
gttaagccaaaacccccaagtgccactagtatacctgctacgctcaaattattacaagat
gaatgggatgctgttatgctttacagtttcacacagcgacagcaattacaaacagctaga
caagaactcagtcacgccttatatcaacatgattcagcttgcagggttgtttccagattg
aataaggaagttactgctgcacgtgaagcattggctacattgaaacctcaagctggcata
actacagtaccccaaccggcccttgctgctgaagcagccggtgttgctaatcaaccaaca
gagcaagctggaatgagcgaagatattatcaagaaactacaagataaggctacagtctta
acccaagaaagaaagaagagaggcagaacagtccccgaggaactgtcaacccaagagcaa
ataagatctttcagaacattagcatcacatccaggattacattctgctagtgttcctggt
attttggctcttgatattcatagtcaggatacaagtaaaattttaactggtggaaatgat
aggaacgcaacagtattcaataaagatactgagcaagtaattgcaattcttaaaggacat
actaagaaagtcacaaatgttatttatcatcctgatgaagacttagtcataacagcttct
cctgatgcaacaatacgtatatggaatgtccccacaagccaaactactctattgctcaaa
gttcacgatggccctgttactggtctttctctccatcccgctggagattatattatatct
acttccgaagatcaaacatgggcattctcagatataaggtcaggtcgtctactcaccagg
gttcaagatgaaaataatatagctttgactactgcccagctacatcccgatggtctcatc
tttggaacaggaggaatagattcaattgttaaaatttgggatttgaaaggacagaataat
gttgcccaattcacaggacatttgggagctataaccacgatggctttctcagaaaacggt
tactatttggctacagctgctgatgatgctagcatcaaattatgggatttgagaaaactg
aagaacttcaagagtattcagttagaagaaggataccaaatcaaagatttatgttttgac
cagagcggtacatacttagctgctgcaggcacagatgtgaggatcttcttaagcaagcaa
tggcaagagctcaaagtgttcaatgatcatacagctgctgcgacaggtgtgagattcggc
aaacatgccagattcctggcatcaacttctatggacaggacattgaaattgtatggatta
gaataa
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