Coccinella septempunctata (seven-spotted ladybird): 123313376
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Entry
123313376 CDS
T07873
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03013
Nucleocytoplasmic transport
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123313376
09122 Translation
03013 Nucleocytoplasmic transport
123313376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123313376
03041 Spliceosome [BR:
cset03041
]
123313376
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123313376
Spliceosome [BR:
cset03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123313376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR3_2nd
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_TEP1_C
Beta-prop_DCAF12
EIF3I
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
123313376
NCBI-ProteinID:
XP_044754172
LinkDB
All DBs
Position
5:complement(20409008..20410286)
Genome browser
AA seq
327 aa
AA seq
DB search
MTNYHLKKFYNTILCQAFSPCGNYFVAGDIYGKISVFHLSKLINPDVKLSKDEQFPKCTF
EVCPNMQINSLLSTETYLIVGAVGEIKAYLWKNIKTSKNVSCAWSIDIPNDKGGLDKPDV
NSLYFLHERDLLLAGCGDNNIYAFQIETRKPVKTLSGHSDYVHCLCGLGNDLISGSEDGS
VCIWDIRENKKRNQIHPYMNDEINRPDLGKWIGAVGYNEDFLICGGGPRLSLWHFRSLNH
STIFPIEDKGIHVAEIYQDKVFAGGRSEYFYQLSFNGNIIAEIPTSGVTTYSMIHQEEPY
KALCIAGSSPKIDVCSNFVYRDLVLTV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattaccacttgaaaaaattttataacaccatattatgccaagcgttttctcct
tgtggtaattattttgtggcaggggatatatatggaaaaatttcggttttccatttatcc
aaattgataaatccggatgtaaagttatccaaagatgaacaatttcctaaatgtacattt
gaagtttgtccaaacatgcaaataaattcattattatcaacagaaacctatctaatagtt
ggggctgttggtgaaataaaagcatatttgtggaagaatattaaaactagcaagaatgta
tcttgtgcttggagcattgatatacctaatgataaaggtggtctggataagccagatgtt
aattccttatactttctgcatgaaagagacttactattggcaggttgtggagataataat
atttatgcctttcaaatcgaaactagaaaacctgtgaagactctttctggtcatagcgac
tatgtccattgcctttgcggtctaggcaatgacctgatctctggaagtgaagatggatca
gtatgtatttgggatataagagaaaataaaaaaaggaatcaaattcacccatacatgaat
gatgaaataaataggcctgatcttggtaaatggattggtgcagtaggatataatgaagat
tttttgatatgtggaggtggacctcgtttatctttatggcatttccgttctttaaatcat
tctacaattttccctattgaagataagggaatacatgttgcagaaatttatcaggacaaa
gtttttgctggtggtcggtcagaatatttttatcaactgagttttaatggtaatataatt
gctgaaataccaacatctggagtgacaacttactcaatgatccatcaagaagaaccatat
aaagcattatgtatagctggatctagtcctaaaattgatgtatgtagtaactttgtatat
agagacttagtacttacagtgtga
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integrated database retrieval system
