Coccinella septempunctata (seven-spotted ladybird): 123313658
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Entry
123313658 CDS
T07873
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123313658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123313658
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
123313658
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
UPF0449
Motif
Other DBs
NCBI-GeneID:
123313658
NCBI-ProteinID:
XP_044754560
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Position
5:29216878..29219835
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AA seq
911 aa
AA seq
DB search
MDVKDTDSNIEDSVKDGEVLGVPSFSNMENFTKEGFNIIKESIKSANELPLSDFDFFELQ
KPFKNIMTAESNRLLTMMNCILKTYGVKGNFKTSSLDFRADLLVETNDTILERVADCIDE
MNGIKKFAIDTTKAEKSTISINGSWNRVNNPKFSANLAATNHVDNPSSVLKLLSGKDIKK
PQESFTDKIDNSNDYPWEPRIKEKPNSLKPLAIFLEETEAGEEFSHPYEVELEKFCVPEE
QLAVDEEEPVFPKPLEETNFVEVDTEEKLNELLEDLRKYKMIAIDLEHHSYRTFMGITCL
MQISTGDTDYIIDTLILRNKLYILNEIFTKPSILKIFHGADSDILWLQRDLSLYIVNMFD
TYQASKVLGYSSLSLAYLLERFCNFTPNKHFQMADWRMRPLPEALKRYARDDTHYLIYIY
KVMKIELFKKSGNNNKLLCIVYDRSLETCKKRYFKPRCTENSYLDFYGSCKRMFDKRQMY
ALKELYNWRDQIARKEDESLGYVLPNHMLLQIAETLPREIQGILACCNPVPPLVRSNLSE
LHQYILKARDISVDQPILLEDTRARGTMIEKQKFDLDNPFFSPFDSSKKCTVESIPVLLE
DEEYNIANILDNEESLEKSEPIFSIVKEGNYSIEKPPRKYRSLIPFERYSCVKVFLEEEE
KQRAAELKNEENEMNTVDTKPNIPEIIEIEEDVEKIYENLDLLTEDNKTEEERLSLLSNH
FSLLSHKTKEDVETEKRLEERLYQKASSMITERVESLAETGGSRKRRREESEEEVSDNEG
LEQKFLSPTPVKSENTGAPKKSKKQKKRLNKQTFQRKDNGTPDWARDRGNKRKSGEGTSS
DSKKSRFSTPQKNNTSQNKRCNRQIEPFDYSSVDFRQFQGGAGEVNEGKTIRTKFRTKRS
NKPSNRGKRHQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaagataccgactcaaacatagaagacagtgtgaaggatggtgaagtgctt
ggtgtacctagcttttcaaatatggaaaattttaccaaggaaggatttaatattatcaag
gaatcaataaaaagtgccaatgaacttccattgagtgatttcgacttttttgaattgcaa
aaaccattcaagaacatcatgactgctgaatcaaaccgccttttaacaatgatgaattgc
attctcaaaacttatggagtaaaaggaaacttcaaaactagcagcttagattttagggca
gatcttctagttgaaactaatgacacaattttggaaagagtagctgactgtatcgatgaa
atgaatggtatcaaaaaattcgccattgatacaacgaaggctgaaaaatctaccatatca
attaacggatcatggaatagagtgaacaatccaaagttttcagcgaatttggctgctaca
aatcatgttgataatccgagctctgtattgaaactactaagtgggaaagatatcaaaaag
ccacaagaatctttcactgacaaaattgataatagtaatgattatccttgggagcctaga
attaaagagaagccaaactccctcaaacctttggctatatttttagaagaaacagaggca
ggagaagaattctcacatccatatgaagtggaactggaaaaattttgtgtacctgaagaa
caacttgcagtagatgaagaagaacctgtatttcctaaaccattagaagaaacaaatttt
gttgaagtagatacagaggaaaagctcaatgaactcctggaagatttaagaaagtataaa
atgattgctattgatttggaacatcactcatacaggacctttatgggtataacatgttta
atgcaaatctctacaggtgatacagactacataattgatacattgatcttacgcaacaag
ttatatattctcaatgaaattttcactaaacccagtatcctaaaaatatttcatggtgct
gattcggatattttgtggttacaaagagatttatccctctacatagtaaacatgtttgat
acttatcaagcctcaaaagtattgggctattcaagtctttcccttgcttatctgctagaa
agattctgtaacttcacccccaataaacactttcaaatggcagattggagaatgcgacca
ctaccagaagctttaaaaagatatgcaagagatgacacacactatctcatttatatatat
aaagtaatgaaaattgaactttttaaaaagtcaggtaataataataaacttttgtgtatt
gtttacgatagaagtttagaaacttgcaaaaaaaggtactttaaaccaagatgcacagaa
aatagttatctagatttttatggatcatgtaaaagaatgtttgataaaagacaaatgtat
gctctcaaagagctgtataattggagagatcagattgctaggaaggaagatgaaagcttg
ggttatgttttacctaatcatatgttacttcaaatagctgaaacattaccaagagaaata
caaggtattttagcttgttgcaatcctgtacctccgttagtgagatcgaacttgtcagaa
cttcatcagtacatacttaaagcaagagatatttctgttgatcaacctatattattagaa
gatacaagagcaagaggtacaatgatagagaaacagaaatttgatttagataatccattc
ttttctccatttgattcatctaagaaatgcactgtggaaagcattcctgttttactagaa
gatgaagagtataatatagcaaatatactcgataatgaagaatccctggagaaatctgag
cccatattttctatagtcaaagaaggaaattactcaattgaaaaaccacctaggaagtat
agaagcttgattccatttgaaagatacagctgtgtgaaagtattcttagaagaggaggaa
aaacagagagcagcagaactgaaaaatgaggaaaatgaaatgaacacagttgatacaaag
cctaatatccctgaaattattgaaattgaagaggatgttgagaaaatatatgaaaacttg
gatcttctcaccgaagacaataaaacagaggaagaaagattatctctgctcagtaatcac
ttcagtttgctctcgcataaaacaaaggaagatgtagaaacagaaaaaagacttgaagaa
cgattatatcaaaaagcatcttctatgataaccgaaagagtggaaagtctcgcagaaact
ggaggaagcagaaaaagacgaagagaggaaagtgaggaagaggtatcggataacgaaggt
ttagagcaaaaattcttaagccccacgccggttaaatcagaaaatactggagctccgaag
aagagtaaaaaacaaaaaaaaagacttaataaacaaactttccagaggaaagataatggt
acgcctgactgggcaagggacaggggtaataaaaggaaatctggagaagggacaagttct
gattccaaaaagagtagattcagtacgcctcaaaaaaataacacttctcagaataaaaga
tgcaacagacaaatagaaccttttgattactcatcagttgatttcaggcagtttcaaggg
ggtgctggtgaagtaaatgaaggaaaaactatcagaacaaaattcagaactaagcgaagc
aataaaccaagtaatagaggaaaaaggcaccagtga
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