Coccinella septempunctata (seven-spotted ladybird): 123314225
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Entry
123314225 CDS
T07873
Name
(RefSeq) ATP-dependent RNA helicase DBP2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123314225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123314225
03009 Ribosome biogenesis [BR:
cset03009
]
123314225
Enzymes [BR:
cset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123314225
Spliceosome [BR:
cset03041
]
Complex A
U1 snRNP components
U1 related factors
123314225
Complex B
123314225
Ribosome biogenesis [BR:
cset03009
]
Eukaryotic type
Pre-60S particles
Helicases
123314225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
CMS1
SET_assoc
Motif
Other DBs
NCBI-GeneID:
123314225
NCBI-ProteinID:
XP_044755307
LinkDB
All DBs
Position
1:complement(21176910..21192461)
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AA seq
644 aa
AA seq
DB search
MSYGNRLNAGVGGGFRGSANNIGDRNMNGGGSFNNNNQRNGFDRGGVGGFKGNSGPPNRV
GGRQRGGFGGSVGRGGNRTASGASGRSFVSGSSRSIPKGGNLGAGNRLRKINWNLRSLHP
FKKDFYEPHPSVANRSSYEVDQYRRSKEVTVDGKHAPNPIQNFSETSFPDYVMEEIKRQG
YDAPTAIQAQGWPIAMSGRDLVGIAQTGSGKTLAYILPAIVHINNQQPISRGDGPIALVL
APTRELAQQIQQVASDFGRTSYVRNTCIFGGAPKGPQARDLERGVEICIATPGRLIDFLE
KGTTNLERCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDY
LNDYVQINIGSLQLSANHNILQIVDVCQENEKPEKLNLLLQEIGNNAEPGSKILIFAETK
VKVEDITRQLRRYGWPAVCMHGDKSQQERDYVLREFRNGKSCILVATDVAARGLDVDGIK
YVINYDYPNSSEDYIHRIGRTGRSDTTGTSYAFFTPNNFRQAKDLVSVLQEANQVVNPKL
LELSNRGGGAYGGRQNRWGGGGGFRHRENGGGFRGKDSGRMGGGRSTNGGGRMMNGNTSD
RGMGSQFGRSGGPRHNSRFSNGQGENRSHYNSHSNWNGNRGENY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacggaaacagacttaatgcaggcgtgggtggtggttttcgtggaagtgctaat
aatataggggatcgaaacatgaatggtggaggttcgtttaataacaacaaccagagaaac
ggtttcgatcgaggaggtgttggcggtttcaaaggtaatagcggacctcctaaccgagtt
ggtggaagacaacgtggtggatttggaggatctgttggaagaggtggaaatcgcacagca
agtggagctagtggacgttcatttgtttctggatcctcgagatctattcctaaagggggt
aatcttggtgctggtaataggcttcgcaaaataaattggaatctcagatctctccatccg
ttcaaaaaggatttctatgaacctcatccttctgttgccaatagatcatcgtatgaggta
gatcaataccgtagatctaaagaagttactgtagatgggaaacatgctccaaatcccatc
cagaatttttctgagactagttttcctgattatgtcatggaggaaatcaaaagacaagga
tatgatgcgcctacagccatccaggcacaaggttggccaattgcaatgagtggacgggac
ctagtcggtatagcacagactggatctggaaaaactctagcctatatattacctgctata
gttcatatcaacaatcaacaacctatatctcgaggtgatggtcctatcgccttagttcta
gctccaacaagagaattggcacagcaaatacaacaagtagcctcagattttggtcgtact
tcttatgttaggaacacttgcatatttggaggagctccaaaggggccgcaagctcgagac
ttagaaagaggtgttgaaatttgtattgctacacctggaaggctcattgacttcttagaa
aaagggactactaatttagaacgctgcacttacctagtccttgatgaagctgatcgcatg
ttggatatgggttttgaacctcagattcgaaaaataattgaacagatccgacctgatcgt
caaacactcatgtggtcagccacatggccaaaagaagttaaaaaacttgcagaggactac
ctgaatgactatgttcaaatcaacattggatcccttcaactttctgccaatcacaacatt
ttacagattgttgatgtttgtcaagagaacgagaagcctgaaaaactaaacttacttctt
caagaaattggtaacaatgcagaaccaggttcaaaaattttgatttttgcggaaacaaag
gtgaaggtagaggacataacaagacaattaaggaggtatggttggccagctgtttgtatg
catggtgacaaaagtcagcaagaacgagattatgtattgagagaattcagaaatggtaaa
tcttgtattctagttgctacagatgttgccgcaagaggattagatgtggatggtatcaaa
tatgtaataaactatgactatcccaattcttctgaagattatatacacagaattggccgt
actggtcgatctgatacaactggaacatcttatgctttcttcactccaaacaacttcaga
caggccaaagatctcgtttcagtcttgcaagaagcgaatcaggtggttaaccccaaattg
ttggagttgtccaataggggaggtggtgcgtatggaggcaggcaaaacagatggggaggt
ggtgggggctttcgccatagagagaatggcggtggtttccgtggaaaagattctggacgt
atgggaggtggaagaagcacaaatgggggaggtagaatgatgaatggcaacacttctgat
agaggaatgggatctcaatttggtagaagtggtggccctagacataactcaagattcagc
aacggacaaggggaaaatagaagccactacaatagtcatagtaactggaatggaaacagg
ggagagaattactga
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