Coccinella septempunctata (seven-spotted ladybird): 123314376
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Entry
123314376 CDS
T07873
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123314376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123314376
03019 Messenger RNA biogenesis [BR:
cset03019
]
123314376
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123314376
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123314376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
123314376
NCBI-ProteinID:
XP_044755581
LinkDB
All DBs
Position
1:10494739..10496612
Genome browser
AA seq
287 aa
AA seq
DB search
MELLVADVSHIKFDIEIALQEQFGALALPFPGMDKSTAAVCQFYATTMNCSKGPQCPFRH
VRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLSGFCPDGSKCKYMHPRFELPAPPDQNT
KDLKKLPIIICHFCGEHGHKAINCLKINPNNREVAQEESNLIKPPIQNNHQEKFDPQNHF
LQKMFPKKLEDVTCYKCGSKGHYANRCPKGHLAFLSSQTKEKENNPE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggagctattggttgcagatgtatcgcatataaaattcgatatagaaatagctctacaa
gagcagtttggagcattagctttaccatttcctggaatggataagtcaactgcagcagta
tgtcaattttatgctacaacaatgaattgctctaagggcccccaatgtcctttccgacat
gttcgaggtgacagaacaattgtttgtaaacattggcttcggggattatgtaaaaaagga
gatcaatgtgaatttttacatgaatacgatatgacaaaaatgcctgaatgttatttttac
tctaggttcaatgcttgtcacaataaagaatgcccatttctgcacatagatcctgaaagt
aaaattaaggattgtccatggtatgatcgaggtttctgcagacatggtccccattgcagg
catcgacatgtacgtagagtactgtgcacaaactatttatcaggattttgtccagatgga
tcgaaatgcaaatatatgcatcctcgatttgaattacctgctccacctgaccagaataca
aaagacctaaaaaaattacccattataatttgccatttttgtggagagcatggtcataaa
gccatcaattgtttgaaaattaatcctaacaacagggaagttgcccaagaagaatccaat
ttgattaagcctcccattcagaataaccaccaagaaaaatttgatccacaaaatcacttc
ttacaaaaaatgtttccaaaaaaattggaagatgttacatgttataaatgtggtagtaaa
gggcattatgcaaatagatgtccaaaaggacatttggctttcttatccagccaaacaaaa
gaaaaggaaaacaatccagaataa
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