KEGG   Coccinella septempunctata (seven-spotted ladybird): 123314382
Entry
123314382         CDS       T07873                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
cset  Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cset00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123314382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cset04121]
    123314382
Enzymes [BR:cset01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     123314382
Ubiquitin system [BR:cset04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123314382
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     123314382
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR19_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C zf-C3HC4_2 Beta-prop_EML Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N WD40_like zf-C3HC4 zf-RING_2 Beta-prop_CAF1B_HIR1 zf-C3HC4_3 zf-RING_UBOX Beta-prop_IFT140_1st WD40_RFWD3 zf-C3HC4_4 zf-RING_5 Beta-prop_DCAF12 Muted RING_XB3-XBAT31 GrpE zf-RING_10 WDR90_beta-prop_4th zf-Nse
Other DBs
NCBI-GeneID: 123314382
NCBI-ProteinID: XP_044755587
LinkDB
Position
5:complement(38402673..38405752)
AA seq 658 aa
MATNYDGNNSPSSQRGSNIPSHRSSLRTPKRQRFQEERNPDLSCPICLNLIEEAHITKCG
HTFCYDCIVKSIESCKRCPQCNNSITSLEMIFPNFALSELIKKHKLRINGLESVGSNHSS
TEFSADGLRDFVAAESQNLTLPDVNVMLEVLTQRKQLLEAESCAAQNRLLLEFLRHLLKQ
KKEQQDQIVKEIAMIEVDVEEVIKKLDEVHKKCPTFEDIERTVSNASENVAPAAVNAMKK
EMLSLIDNISTSTSSNDKISGVDSSSNTISSSLAARRRRMYAHFDDFVGSYFATRSKEVY
FGKEHTDKSTRTSSELSKGLDEFRENLIKFSRFNSLVLLTSIDYSNKIFCNPSIVSSIEF
DKDNEFFAIAGVTKRIQVFDYNSILNDTIDIHYPCIEMVCKSKISCVSWNSYHKSTLASS
DYEGTVTIWDASTGQRTKTYQEHEKRCWSVDFNEMDTRLIASGSDDARVKLYSLNSEHSI
ATLEAKANVCCVKFHPKSSRNLAFGSADHCVHYYDLRNMKEALMIFKGHKKAVSYVKFLN
SDEIVSASTDSQLKMWNINAPNCTRSFVGHINEKNFVGLATNGDYVACGSENNSLYVYYK
GLSQMLFKYKFTSVQGVLEQERREDDVNEFVSAVCWKQNSNVIVAANSQGIINILQLV
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcgaccaattacgatggaaataattcaccttcgagtcagagaggatcaaacattcct
tcacatcgttcttcgctacgtactcctaaaagacagcgatttcaggaagaacggaaccca
gatctatcatgcccaatttgtctgaatttgatagaagaagcccatataaccaaatgtggc
catactttttgttacgattgtattgtcaagtcgatagaatcttgcaagcgttgtccccaa
tgtaataactcaatcacaagtttagagatgatctttcccaactttgcactaagcgaattg
attaaaaagcacaaacttagaattaatggattggaatctgtaggttcgaaccatagctca
actgaattttcagcagatggtttaagagatttcgttgctgctgaatcgcaaaatttaaca
ctgccagatgtcaatgtaatgttggaagttttgacccagaggaaacagctacttgaagcg
gagtcatgtgcggctcagaaccgtttgttgctggagttcttgagacatctgttgaagcag
aagaaagaacagcaagatcaaattgtgaaggagattgcaatgatcgaagtcgatgtagaa
gaagttataaaaaagttggatgaggttcataagaaatgtcctacttttgaagatatagag
aggactgtgtcgaatgcctctgagaatgtggcaccagctgcggttaatgctatgaagaaa
gaaatgctgagcttaatcgataatatatctacttctacatctagcaatgataaaatcagt
ggggttgatagttcgtctaatactataagtagttctttagcagctaggaggagacggatg
tatgctcattttgatgattttgttggcagctacttcgcaacgagatccaaagaagtatac
tttgggaaagagcacacagacaaatcaactagaaccagtagtgaattaagcaagggtttg
gatgaattcagggagaatctgataaaattttcgaggttcaattctttagtactactcacg
tctatagactactccaacaaaattttttgtaacccatccattgtttcgagtattgagttt
gataaagataatgaattcttcgccatcgccggtgttaccaagagaatacaagtgtttgat
tataattcaattctgaatgataccatagacatacattatccttgcatcgagatggtgtgc
aaatccaaaatatcctgtgttagttggaatagttaccataaaagcaccttagcatcgagc
gattatgaaggtactgtaacaatatgggacgcttcaaccgggcaaagaacaaagacttac
caagaacacgaaaaacgttgttggagtgtggatttcaacgagatggatactagattgata
gcttcaggctccgatgacgcaagagttaaactttattctctgaacagtgaacattcaatc
gctactctggaagccaaagccaacgtatgctgcgtgaaatttcacccgaaaagttcccgg
aatctagcatttggcagtgccgatcactgtgtacattattacgacttgaggaacatgaag
gaagctttgatgatatttaagggtcacaaaaaggccgtcagttatgtgaaatttttgaat
agtgacgaaatcgtgtcggcttctaccgattcgcaactgaaaatgtggaatattaacgct
ccaaactgcacaagatccttcgtgggccacatcaacgagaagaactttgttggtcttgct
acaaacggtgattacgtagcttgtggatcggaaaataattctctttatgtttattataaa
gggttgagtcagatgctttttaagtacaaatttacttctgtgcaaggtgttttagaacag
gaacggagggaagatgatgttaatgaatttgtttcggctgtgtgctggaagcaaaactct
aatgttatagtagctgcaaatagccaaggaataataaatatacttcagttagtgtag

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