Coccinella septempunctata (seven-spotted ladybird): 123314418
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Entry
123314418 CDS
T07873
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123314418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cset03400
]
123314418
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123314418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_27
AAA_23
Motif
Other DBs
NCBI-GeneID:
123314418
NCBI-ProteinID:
XP_044755642
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Position
1:38787082..38797051
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AA seq
1114 aa
AA seq
DB search
MSKTPKRKSLGGQTNTLFSYFKSPKVEKKDELVKETLEEKPISPEESDDEEIVKSRKRKR
IIIHSDSEDEGESGGKKAPKIEKFVRRKSEEESEGVGNGFNDSSENDDKTHNGSEMKGSL
EKFSFEYNQTADKNKPTDDILKDSQIAMKMPASSDVVVSIHNNWKHNHLAFLQPDKIKDK
NKRRPDHPEYDNRTLFIPDDFLNNQTPAMRQWWILKSSHMDTVLFFKVGKFYELYHMDAV
VGVQQLGFSYMKGEFAHSGFPESAYAKMASILIEKGFKVARVEQTETPEMMAERCKLQKK
TTKYDKVVKREICQISTKATLVYSAQMPDATQAMSSYLYAIAEKKIQNGVRFGVCFVDTS
IGIFHLSEFEDDKHCSRLLALCAEYKPELILVERGRQSSVVSEVFNTYFKDIRKENLAPT
SQFLTADKTLESLSTGPYFKDKSGQFAWPQIFSEVAEECIPKSEYELTLKCLGACLWYLR
DSELDIHVFSMKQFKMYTPKDLETNHKVIQRDYMVLDAVSMDNLNLLGGQGSLQKNIDYC
ETPFGKRLLHQWICRPLCDVDKIKERQTAVKELASNTDFLKPAQEILKKLPDLERQIAKI
HIYGNKYCAENHPDGRAIFYESKTYTKRKIHDLLNTLRGFESAQGLTDIFKGCESRLLKK
ITQTGASGMYLDLSESLQFFREAFDQEMASKDGVIIPKAGVDEDYDAVMDKIANIQKSLD
KYLKEQEKYFGCKISYFGSDKKRFQLEIPDTHTRKVTSDYQLEGTKKGNKPCKRYHTEET
RGFLSAMLKAEGEKAKIIQDLNRRIFEKFSQRYSEWEQVTHCIMYLDVLCSIATYSTLSS
HAVCLPEIRPFHDKSMICIKNARHPCITNIENFVPNDISMNCDDKAGLVLITGPNMGGKS
TLMRQVAVIAVMAQMGAFVPAEECTLNLVDRVFTRLGAHDNIIGGQSTFFVELSEASSIL
QHASPHSLVLLDELGRGTSTHDGNAIATAYVKKLLQINCRTLFSTHYHTLVDHFVNRTDV
QLGHMACMVENDEDPTQESVVFLYKMVEGRCPKSYGFNAARLAGLKHSIVSRAREIAKVL
ENQSKGRDIFRKIFCTSEPTNLRMLISYLKNLKF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaacgcctaaaagaaaaagtcttggggggcaaaccaacacattattcagttac
ttcaagtcaccaaaggtcgagaaaaaagatgaacttgtgaaagaaacattggaagaaaaa
cctatttcaccagaagagagtgatgatgaggaaattgtgaagagtagaaaacgaaaaaga
attatcatccatagtgattctgaagatgaaggggaatcgggagggaaaaaagcacctaaa
attgaaaaatttgtcaggagaaagtcagaggaggaatcagagggtgttggcaatggtttt
aacgattcatctgaaaatgatgataaaactcataacggtagtgagatgaaaggatcattg
gagaaattctcctttgaatataatcaaacagcagacaaaaataaaccaactgatgatatt
ctaaaagattctcaaatagccatgaaaatgccagcatcatcagatgtagttgtcagcatc
cataataactggaaacacaatcatctcgctttccttcaaccagacaaaataaaagataaa
aataaaagacgtccagatcatcctgagtatgataatcggacccttttcattcctgatgac
tttctgaacaatcaaacaccagctatgaggcagtggtggattcttaaaagttcacacatg
gacacagtcttatttttcaaagttggaaaattttacgaattatatcatatggatgctgtt
gttggagtacaacaactaggtttttcctatatgaagggggaattcgcccattccggtttt
cctgagagtgcttatgccaaaatggcaagtatattgatagaaaaaggttttaaagtagct
agagtggaacaaacagaaactccagaaatgatggctgaaaggtgtaagttacagaagaaa
acaacaaagtatgataaggtcgtgaaaagagaaatttgccaaatatcaacaaaagcaaca
ttggtttacagtgctcaaatgcctgatgccactcaagcgatgtcatcttatctctatgca
atcgcggaaaaaaagattcagaatggtgtcagatttggagtatgttttgttgatacgtca
attggtattttccatctttcagagtttgaagatgacaaacattgttcaaggttattagca
ctctgcgctgaatataaacctgaattgattttagtagaaagaggtcgacagagttctgta
gtatctgaagtatttaacacttacttcaaagatataaggaaagaaaatttagcaccaacc
tctcaatttttaacagctgataaaactctagaaagtctttcaacaggcccatactttaaa
gataaatcaggacaattcgcttggccgcaaatcttctcagaagtagccgaggaatgtatt
cctaaatctgaatatgaattaactcttaagtgtttaggagcttgtctgtggtatttgagg
gattcggagttggatattcatgttttttcaatgaaacagttcaaaatgtatactccgaaa
gacttagaaactaatcataaagtaatccagagggactatatggttttagatgcggtatca
atggataatttgaatttacttggaggacaaggatcattgcaaaaaaatatcgattactgt
gagaccccatttggcaaaagacttttacaccaatggatttgtcgaccactgtgcgacgtt
gataaaataaaagaaaggcaaactgcagtgaaagaactggcttcaaacacagatttcttg
aaacctgcccaggaaattctcaaaaaattgcctgatttagagagacaaattgcaaaaatt
cacatctatggaaataaatattgcgccgaaaatcatcctgatggccgtgcaatattttat
gaatctaagacttatacgaaaaggaaaattcatgacctcttgaacacactcagaggtttc
gagagtgcccaaggtctcacagatatcttcaagggttgtgagtcaagattattgaaaaaa
atcactcaaacaggggcatcagggatgtatttagatttgagtgaaagcttgcagtttttc
cgagaagcattcgatcaagagatggccagtaaagatggtgttataataccaaaagctggt
gttgatgaagattacgatgcagttatggataaaatcgcaaatattcagaaatctttggac
aagtatctgaaggagcaagagaaatattttggttgtaaaatttcctattttggatctgat
aaaaaaaggtttcagttagaaatacctgatactcacacaagaaaagtaaccagtgattat
caactggagggaacaaagaaaggaaataaaccctgtaaaagataccatactgaagaaaca
cgaggttttcttagtgctatgttgaaagctgaaggtgaaaaagcaaaaatcatacaggat
ttaaataggagaatttttgagaaattttcccaaaggtacagtgaatgggagcaagtaacc
cactgtataatgtacctggatgttctttgctctattgctacttactccacgttgtctagt
catgcagtttgtttgcctgaaattcgaccgttccacgataaaagtatgatatgcatcaag
aatgcaaggcatccttgtatcacaaatatagagaatttcgtacctaacgatatatctatg
aactgtgatgataaagctggtttggtcttgatcactggacccaatatgggtggtaaatcg
actctaatgcgacaggttgctgtgatagctgtgatggcacaaatgggtgcctttgtgcct
gcagaagaatgtactttgaatcttgtggatcgtgtttttactagattgggagcgcacgat
aatattatcggagggcagtctacgttctttgtggagctatctgaggcttcctcaatttta
cagcatgcttccccacattccctggtgctgttggatgaacttggcagaggtacttctact
catgatggaaatgctatagcaactgcttacgttaaaaagcttctacaaatcaattgccga
accctcttctcaacgcattatcacacactagtggatcatttcgtcaataggactgatgta
cagctgggtcatatggcttgtatggtggaaaatgatgaagatccgacgcaagaatctgtg
gttttcctctataagatggttgaaggcagatgtccgaaatcgtatggattcaacgcagct
cgtcttgctggtttgaaacattccatagtgtctagggcaagggagatcgcaaaggttctg
gaaaatcaaagtaaaggccgtgatattttcaggaagatcttctgtacttccgaaccgact
aacttaagaatgttgatttcctatttgaaaaatctgaagttttaa
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