Coccinella septempunctata (seven-spotted ladybird): 123314964
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Entry
123314964 CDS
T07873
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123314964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123314964
Spliceosome [BR:
cset03041
]
Complex C
Other components
Step II factors
123314964
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
PQQ_2
NBCH_WD40
Beta-prop_DCAF12
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
123314964
NCBI-ProteinID:
XP_044756391
LinkDB
All DBs
Position
6:33051346..33053834
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AA seq
582 aa
AA seq
DB search
MLAIQSYGDSDEDIEDKNINEGTSNVNEQNSDDNALIHLAPIPDERKEFSIKNKLQVCAA
PVVLPTGKEESVIPIDPTATEILYNPRYEQLFAPTLGPENPFKTQQHQANRNMLAGYVEP
AHVSSFQFENQRRTFNSFGYALDPTVGDENTDKVIGAIEEASTSNVKTVFESTKLRPLDK
RKRKKNNDPEDIDGFLGPWGGFIDEQKIAKPTEEEAAELEELVSKRNKRGKPVEEKPLEE
KSILHIKDPYDYQGRSFLHAPQDVGVNLRSDSPPEKCFLPKAHIHTWTGHTKGIHAIRWF
PRSGHLLLSASMDCRIKLWEVYNERRCIRTYYGHRQAVRDINFNNSGKHFLSAAFDRYIK
LWDTETGQVISRFTSRKIPYCVKFNPDGNKQHLFVAGTSDKKIICWDTRSGDIVQEYDRH
LGAVNTITFVDDNRRFVTTSDDKSLRVWEWDIPVDMKYIADPTMHSMPAVTPAPNGKWLA
CQSLDNKVVIFSALNRFKINRKKTFTGHMVAGYACSLDFSPDMSYLVSGDADGKCFIWDW
KSTKVFKKWKAHDNVCISTLWHPHEPSKLVTAGWDGLIKYWD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgattcaaagttatggggatagtgacgaagatatcgaagataagaatatcaat
gaaggcacttcaaatgtaaatgagcaaaactcagatgataatgcactcattcatctggct
cctatacctgacgagaggaaagaattttccattaaaaataaattacaagtttgcgctgct
ccggtagttcttccaactggtaaagaagaatctgttattcccattgatccaaccgcaaca
gaaattctgtataatccaagatatgaacaactctttgcaccaactttgggccctgagaat
ccattcaaaacccagcaacatcaagccaatagaaatatgttggcaggttatgtggagcct
gcccatgtcagttccttccaatttgaaaatcaaagaaggacctttaatagttttggttat
gccttggacccaactgttggtgatgaaaacactgataaagttataggggctattgaggag
gctagtacatccaatgtaaagacagtttttgagtcgacaaaacttagacctttggataaa
aggaaaaggaagaaaaacaatgatccagaagatatagatggatttttgggtccatggggt
gggttcatagatgaacaaaaaattgcaaagcctacagaggaggaagccgctgaacttgaa
gagcttgtttcgaagagaaacaagagaggtaaaccagttgaagaaaagccgttggaggaa
aagtccatattacacatcaaggatccctacgattatcaaggaagatcatttttacacgca
ccccaagatgttggtgtcaatttacggtcagacagtcctccggagaagtgtttcttgcca
aaagctcatattcatacatggactggtcatacgaaagggatccatgcgattcggtggttt
ccacgatctggacacttattactatccgctagtatggattgccgtatcaaactttgggag
gtttacaacgagaggagatgtatcagaacgtattacggtcatcgccaggctgtcagggat
atcaatttcaacaattcaggcaaacatttcttgtccgcagcttttgatcgttacatcaaa
ttatgggacacggagactggtcaggtgatttcgaggttcactagccgtaaaataccgtat
tgtgtcaagtttaatccggatggtaacaagcaacatctgtttgtggctgggacgtcggat
aagaaaattatttgttgggacacaagatctggggatatagtacaagagtatgataggcac
ttgggggctgttaatactataacttttgtcgatgacaatagaaggtttgtgaccacttcc
gacgacaagagtttgagggtttgggaatgggatattccggtggatatgaagtacatagcc
gatcctaccatgcacagtatgccggctgtcactcctgctccaaacggaaaatggctggct
tgtcaaagtttggataataaagtcgttattttttcggctttgaacaggtttaaaataaac
aggaagaaaacctttaccgggcacatggtggccggttatgcctgcagtttggacttctcg
ccggatatgagttatctcgtgtcgggagatgctgacggaaaatgcttcatttgggactgg
aaatcgacgaaggtgttcaagaaatggaaagctcacgataatgtctgtataagcacactt
tggcacccccacgagccgagtaagttggtgacggctggttgggatggactgatcaaatat
tgggattga
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