Coccinella septempunctata (seven-spotted ladybird): 123315436
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Entry
123315436 CDS
T07873
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03013
Nucleocytoplasmic transport
cset03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123315436
03015 mRNA surveillance pathway
123315436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123315436
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123315436
mRNA cycle factors
P-body specific factors
123315436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
123315436
NCBI-ProteinID:
XP_044757061
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Position
1:complement(70516766..70521892)
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AA seq
1124 aa
AA seq
DB search
MTAQSPDKKDDENTQEEEEAERAELEMYIKEFHERLISKQELRAANQNAHNIRPPESYFS
KLDSNVKKNTSFVKKIKNFTANQLDTYIKDMSGLNLSKYISEVAAGLVDAKLKMTDVYAV
VKLCSLLNQKYGDFSQLLFENWQKNLSIKPGEKIVNPSKLRVDVRLYADLVQAGIFNNKN
AFTLLGNVLTTLINMDKEEHSNISIILSFCKHCGEDYAGLVPRKMRLLEEKFKITIPRST
FLPPEKQQNVKSLLRDYFISLSKHLVKDHQEIMNFEKQNTRILQTKGELSVERKEKLLNM
QMAFEKLLNSAKSFAEVLDENMPSLKAQTPVQSQENMIVTGSGPDIDDSSQSFIEKIWVD
SETQKFYCQLPELQAFLPSSFINKCNTVAPQDVVTEEVLDSELPAETEECEEDGKIEEAV
LVPEDDIEETTVSTASNKIVLEAFLNNLHNCVNREMIDNAAIDFLVTLNSKHNRKKLVRA
LFVVNRTRLDLLPFYARFVAILHPAVPEVGNELCQMLRQDFKYHVRKKDQINIESKIKVV
RFIGELVKFQLYPKIEALYCLKILLHDFSHHHIEMACNFLEVCGRFLYCSPDSHQRTKVY
LEQMMRKKSVLTLDSRYVTQIENAYYYVNPPEVVTVAKKERPVMHQFIRKLLYQDLQKNN
IDKVMRLMRRLNWNDEVISAYAIKCLTNAYNLKYYNIRCLANLLAGLVSYQEEIGTRVVD
GVLEDIRLGMEKNLAKYNQRRVAQVKYLGELYNYRMVESADVFKVFYSLITFGVSLDPLV
TSPLDPPNHLFRIRLVCILLETCGTYFSSGSSKKRLDYYLTFLQVYYWFKKSQWGESFPP
FLDHIFKETVLTLRPKLKLCKSYEDAQKEVENIRVTLGIENLLSSESKTNEDVLDTIAET
DNEDFAEEEVSESAPGRSTDETATEDETVDHTQGSDDEGDLQSEADPVSESLAIPAAPKK
VECPEDDEFQNALDKMVSENIQERMREPVKANNIDISVPVVMKTNMKKSYEQLQEHGEGD
NNKIGFVLMVRKGNKQQYKAFQADKNSELAQNLRDQEIAQKEEKERVKRLTLNITERLEE
EDYQELVQQQNRPVTQNYNRERKKYQHPKGAPDADLIFGPKKVR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaaagtccagacaagaaagacgatgagaatacacaagaggaagaggaggca
gaaagagctgagttagaaatgtatataaaagaatttcatgagagactgatttcaaagcaa
gaacttcgtgctgccaatcaaaatgcacacaatattagaccccctgaatcttatttcagt
aaacttgattccaatgtcaagaaaaatacatcgtttgtaaaaaaaattaaaaacttcact
gccaatcaactggatacctatatcaaagatatgtccggattgaacctatcaaaatatata
tcagaagtagcagctggacttgtggatgctaaattaaagatgactgatgtgtatgctgtt
gtgaaactatgtagtttgttgaatcagaaatatggagatttttctcagttgctttttgaa
aattggcaaaagaatctatccatcaaaccgggagaaaaaattgttaatcctagtaaattg
agagttgacgtaaggctgtacgcggatttagtgcaagctgggattttcaacaacaaaaat
gctttcactcttttgggtaatgttttgacaactcttattaatatggataaagaagaacat
agcaatatatctataatacttagtttctgtaaacattgtggggaagactatgcaggtttg
gtaccaagaaaaatgcggctactagaagaaaaattcaaaataacaattcctcgtagtact
tttctacctcctgaaaagcaacaaaatgttaaatccttacttagggattatttcataagt
ttgagtaaacatctagtgaaagaccatcaagaaataatgaattttgagaagcaaaacaca
agaatactacagaccaagggagaattgagtgtagagaggaaggaaaagttattgaacatg
cagatggctttcgaaaagcttcttaatagcgccaagagcttcgctgaagttctggacgaa
aacatgccgtctttgaaggcccaaaccccggtgcaaagtcaggagaacatgattgtgact
ggatccggcccagacatcgacgacagttctcagtctttcattgaaaagatttgggtcgac
tcagagacgcaaaaattttactgtcaacttcctgagttacaagcatttctcccatcgtct
tttatcaataagtgtaatactgttgctccccaggatgttgtcactgaagaggtattagat
tctgaattacctgcggaaactgaagaatgcgaggaagatggtaaaatcgaggaagctgtt
cttgttcctgaagatgatatagaagaaacgactgtcagcacagctagcaacaagatcgtt
ctcgaggcctttctgaacaatctgcacaattgcgtcaatcgagaaatgatagacaatgct
gcgatagattttctcgttacgctgaacagcaaacacaaccgtaaaaagttggtgagagct
ctgtttgtcgtgaaccgaacgcgtttagatcttttaccgttctatgcaagattcgtggcc
atcctgcatccagccgtgccagaggtggggaacgaactgtgccagatgttgagacaagat
ttcaagtatcatgttcgtaaaaaggatcaaatcaatatagagtcgaaaatcaaggtggtg
agattcattggggaactggtgaaatttcagctttatcccaagatagaagctctctattgc
ctaaagatactcctccacgatttctcccatcaccacatcgagatggcttgtaatttcttg
gaagtttgcgggagatttctctactgcagcccggattcgcaccagaggaccaaagtctat
ttggagcagatgatgaggaaaaaatccgtgcttaccctggactctcgttacgttacacag
atagaaaacgcctattattacgttaatccgccggaagttgtgactgtcgcgaaaaaggag
aggccagtcatgcaccagttcatcaggaagctcttatatcaggatctacaaaagaataac
atcgacaaagtgatgagactcatgaggaggttgaattggaacgatgaggtcatttcggct
tacgccattaagtgtctgaccaacgcttacaatctcaaatattataacataagatgcctg
gctaatcttttggctggcctcgtatcatatcaagaagaaattggcacaagagtggtcgat
ggagtgttggaagatatcaggttaggtatggagaagaatctggccaagtataatcaaaga
cgagtagctcaagtgaaatatctaggagaattgtataattatcgaatggttgaaagcgcg
gatgtgttcaaggtcttttattccttgataacatttggggtttctttagatcctctagtt
acctcaccgttggatccgcccaatcatcttttccgcataagattggtctgtattctgctc
gagacttgcggtacctacttcagtagcggaagtagcaaaaagaggctcgactactatctc
acgttcctccaggtttattactggttcaaaaaatcccaatggggggaatctttccccccg
tttctggaccacatcttcaaggagaccgtcctcacgctgagaccgaagttgaagctgtgc
aagagttacgaggacgcgcagaaggaagtggaaaatatcagagttaccttgggcattgag
aatctgctttcatctgaatcaaaaacgaacgaagacgtattggacactatagccgaaacc
gataatgaggattttgccgaagaagaagtttccgaatcggctccaggtagatcaaccgac
gaaacagcaacggaagacgaaacagtggatcacacccaaggttcagatgatgaaggggat
ttgcagagtgaagcagatccagtgtcggagtcgctcgcgatacctgcagctcccaaaaag
gtcgaatgtcccgaagatgacgagttccagaatgcgttggataaaatggtttcggaaaac
attcaagaaaggatgagagaacccgtgaaggcaaacaatatagacatatcagtcccggtg
gtcatgaaaacaaatatgaagaaaagttacgaacaattacaggagcatggagaaggcgat
aacaataagataggtttcgttctgatggtcagaaaagggaacaaacaacaatacaaggct
ttccaagcggataagaactctgaattggcccaaaatctgagagatcaggagatagcgcaa
aaagaagagaaagagagagtgaaacgtttaaccttaaatataactgaaagactagaagaa
gaagattatcaagaattagtgcaacaacaaaatagaccagtaacacaaaattacaatagg
gaaagaaaaaagtaccagcatcccaagggggctccagatgcggacttgatatttgggccg
aaaaaagttaggtaa
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