Coccinella septempunctata (seven-spotted ladybird): 123315820
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Entry
123315820 CDS
T07873
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03440
Homologous recombination
cset03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123315820
03450 Non-homologous end-joining
123315820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cset03032
]
123315820
03400 DNA repair and recombination proteins [BR:
cset03400
]
123315820
DNA replication proteins [BR:
cset03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123315820
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123315820
BRCA1-C complex
123315820
NHEJ (non-homologous end-joining)
MRX complex
123315820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
Rad50_zn_hook
AAA_15
SbcC_Walker_B
AAA_29
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
123315820
NCBI-ProteinID:
XP_044757620
LinkDB
All DBs
Position
6:complement(32412693..32417098)
Genome browser
AA seq
1308 aa
AA seq
DB search
MATLLKLQLSGIRSFGPFEEHTQTISFDTPVTLLVGQNGCGKTTILEAIKYACTSDLPGG
TAKGQGFVHDPKISDRAQTKGQIRLKLIDVKGDIYTIVKAIQVVQGPSSMSFSSLDSSLS
ILYTNGEKHHSSGRCVEIDKHCAQVLQISPCILNNVLFCHQENSSWPLDEGKKVKEKFDE
IFDSKKYNKCGEVLSKALTAKETKIKLLKYEVETKKEKKVEVTKKKKLLDEKKDKCRALH
EDVLKKVELLEPHKIRLDEIEQLEVDLGRLQKQLASKDAEKKGLIQQQNMLKQNITDVFQ
GDDEELQVKISEFEQDQKKKEALIRELDEKRKEIAKKETRINEEIQKEQIKLGQLREEKK
QFELKINNRNTLFVKAKESLEVSDPFVWDTTEESLQAINKLKAKLKVIDDDLQDFIKKKN
LEESVMQEKIDKAREALATTKEKVKSTSTDIRKIDEKMLQVKNEIQELDIASSRLVAINK
KIENLTKTLETLESNFDEKATEVEIGNSKKEIVKMETKLEELEELYKILQHNYIVEEKLN
LEEQTKIKKRTELNKIMNRHSGNFNTLFKEAIPKINIGGKVQAILSTNENEIKKLNTDIS
NKQKEITKLETQIHHQSRDIKRFESELQSKKSQIASVCRNTDYTLLLRQTFERKERFQKE
KGQYSSAKIMYQTFIEEFEKEKACCPICETDFSGKTNIVLAIVEKLKQKIISIPEKLATA
ETNLNKEEKLYNKLQQLKPVNENVEELSNVKLPLLYEQLENDKTQLKESTDQLSKLNEDL
KTPTKIVEICRKVLTDATLLDQYYADIKASEENIDELLNQKQTVNTTKNKQEVESELENL
NGDLKDQRKKSDSLRQKLDQHKQRCQKIKEDKSRELELQLKYQTQANNKPHLEKQLEELN
DNYSCLLVEKEEQQAELTKLDVELNGLNKEKTTLVSSNEKLINNKRLETNKKSKLVEEIV
KLDTEITDYRNKNSDGKLQDQIEKVSKFEDQRKKLVEIKNETMNKITEKKEEIAKQATKL
RDLQDNVTLREKQKAEGILVIEITKLQNKIGTYNYQSVYEEKLKLKRKIELGERDINSLR
GQETELKTTIEDIEKELNQPENKNSEKIYKEKLFELKLMEKLVTDLKIYIKALHHSVLEY
HKDRMVQINYRIRELWRNIYKGNDIDYIEIQTKESKSTSSAKKTYDYKVVQKKNGVELEM
RGRCSAGQRVLACLIIRIALAESFSSHCGILALDEPTTNLDKENVTSLTYALSNLITSHV
NDNNFQLIVITHDQDFLDILRHSVQNISHYWRVSRNPQGYSIIKKERL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggcaactttattaaagttacaactgagcggtatacgtagttttgggccatttgaagag
cacacgcaaacaatctctttcgatacacctgtaacactcttggttggacaaaatggctgt
ggcaaaacaacaattctcgaagctatcaaatatgcttgcactagtgatctgcccggtggt
acagctaaaggacaaggtttcgtccatgatccaaaaatatcagatcgtgctcagactaag
ggccaaataagacttaaattgattgatgttaaaggggatatttacactattgtgaaggct
attcaagtagttcagggaccttcctcgatgtcattctcttctcttgactcttcgctgtct
attctttataccaatggggagaagcatcactcttctggtcggtgtgttgaaattgataaa
cattgtgcgcaagtattacagatttctccttgtattttgaataatgttctattttgccat
caagaaaactcttcatggcctcttgatgaaggtaaaaaagtgaaggagaaatttgatgaa
atattcgattctaagaagtataataagtgtggtgaagtactcagtaaagcattaactgca
aaagaaactaagattaaattgctgaagtatgaagtcgaaactaaaaaagaaaagaaagta
gaagtgactaaaaagaaaaaactactagatgagaagaaagacaaatgtagagcacttcat
gaagatgttttgaaaaaagttgaattattggagcctcataaaatcagattggatgaaatc
gagcagttggaagtcgatttgggaagattacaaaaacaattggccagtaaagatgcagaa
aagaaagggttaatccagcaacaaaacatgctaaaacagaatataactgatgtatttcaa
ggtgacgatgaggagctacaagtgaaaatatctgagtttgaacaagaccagaaaaaaaaa
gaagctttaataagagagctagatgaaaaaagaaaagaaatcgcgaaaaaggaaactcga
attaacgaagaaatacaaaaagagcagataaaacttggtcagttaagagaagaaaaaaaa
caatttgaattgaagataaataacagaaatactctcttcgtgaaagcaaaggaatcactg
gaagtctccgatccgtttgtgtgggatacaactgaagaatcacttcaagcaatcaataag
ctcaaagcaaaactgaaagtaatcgatgacgatttacaggatttcatcaaaaagaaaaat
ctcgaagaaagtgttatgcaagaaaaaattgataaggccagggaagccctagctaccacc
aaagaaaaagttaaatctacctctacagatattcgcaaaatcgacgaaaaaatgttgcaa
gtcaagaatgaaatacaagaacttgacattgcgagcagtcgattggttgcgataaacaaa
aaaattgagaacttgacaaaaactcttgaaactcttgaaagtaacttcgatgagaaagca
accgaagttgagatcggtaacagcaaaaaagaaatagttaaaatggaaacgaaactagaa
gaattggaagaactctataaaattcttcaacataactatatagtagaggaaaaattgaat
ttagaagaacaaacaaaaatcaagaaaaggactgagctgaacaaaatcatgaacagacac
tctggcaacttcaatactctttttaaagaagcaataccaaaaataaacataggaggaaaa
gtacaagctattctctccactaatgaaaatgaaatcaagaaactcaacacggacatatcc
aacaagcaaaaggaaatcaccaaactggaaacgcagatacatcatcagtcacgagacatt
aaaagatttgaatctgaactgcaatctaaaaaatcccaaatagcttcagtatgtcgaaac
accgattatacattattgctgaggcaaactttcgagcgaaaggaaagatttcagaaggaa
aaaggacaatacagttccgccaaaattatgtatcaaaccttcattgaggagtttgaaaag
gagaaagcctgttgtccaatttgcgaaacggatttttctggtaaaactaacatagtttta
gccatcgttgagaaattgaaacaaaaaattatatctataccggaaaaattggcaactgcc
gaaacaaatctaaacaaagaagagaaattatataacaaactacaacaactcaaaccggta
aacgagaacgtcgaagaattatccaatgtaaaattgccattactgtatgaacaattagag
aatgataagacccaattgaaggaatcgacagaccaattatctaaactgaacgaggatttg
aaaacgcctacgaaaattgttgaaatctgcaggaaagttctaacggatgccactctactg
gatcaatattatgcggatataaaagcaagcgaagaaaacatcgacgaactactgaatcaa
aaacaaacagtgaatacaacaaagaataaacaagaagttgagagcgaattggaaaacttg
aatggggatcttaaggatcaaagaaaaaagtcagacagtttgagacaaaagttagaccaa
cacaaacaacgttgtcagaaaataaaagaagataaaagtagagaattagagttacaactc
aagtatcaaactcaggcaaacaacaagcctcacctagagaagcaactggaggaattgaac
gataactacagctgtcttctggtcgaaaaggaagaacaacaagcagaactgaccaagctc
gatgttgaactaaacggtttaaacaaggagaaaacgacgttagtaagcagcaacgagaaa
ttaatcaataacaaacggttggaaaccaataaaaaaagtaaattagtggaagaaatcgtc
aaattagacacggaaattacagattacagaaataaaaactccgatgggaaactgcaagat
caaattgagaaagtgagtaagttcgaagaccaaaggaagaagcttgttgagataaagaat
gaaactatgaataaaataacggagaaaaaggaagaaatagcgaaacaagcaacgaaactc
cgggatttacaagataatgttaccttgagagaaaaacaaaaagcggaaggaatactagtt
atcgaaataacaaaacttcaaaataaaataggcacttataattaccagtccgtatatgag
gaaaaacttaaattgaaacgaaagatcgaactgggagagagagacatcaacagcttgaga
ggacaggaaacggaactgaaaacaacaatcgaagatattgaaaaagaactgaaccaaccg
gagaacaagaattctgaaaaaatttataaagaaaagctgtttgaattgaaactgatggaa
aaactcgtcaccgatttgaagatttatatcaaagctctacaccactccgttctggaatac
cataaagacagaatggtacagataaactacagaataagagagttatggaggaatatctac
aagggtaacgatatagattacatcgaaattcaaactaaggaatccaaatcgacttccagt
gccaaaaaaacttacgattacaaggtcgttcagaagaaaaacggtgtggaattggagatg
agaggaaggtgcagcgcaggacaacgagttctagcttgtttaatcatcaggatcgctctg
gcggaatccttcagttctcactgtggtattttggcgttagatgagcccacaaccaatttg
gataaggaaaatgttacgagcctcacttatgcgttgtccaatttgatcacttcgcatgtg
aacgataacaattttcaacttatagttataacgcacgaccaagatttcttggatatcctg
aggcatagtgtgcagaatatttctcactactggagggtgagcaggaatcctcaaggttat
tccataatcaaaaaagaacgtttataa
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integrated database retrieval system
