Coccinella septempunctata (seven-spotted ladybird): 123315877
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Entry
123315877 CDS
T07873
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03015
mRNA surveillance pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123315877
09123 Folding, sorting and degradation
03018 RNA degradation
123315877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123315877
03041 Spliceosome [BR:
cset03041
]
123315877
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123315877
mRNA cycle factors
Stress granule specific factors
123315877
Spliceosome [BR:
cset03041
]
Complex C
Other components
Complex C specific factors
123315877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_Nup35
RRM_10
RBD_DEAH11
RRM_5
RRM_MARF1
RBD_RDR6
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
123315877
NCBI-ProteinID:
XP_044757714
LinkDB
All DBs
Position
6:complement(32928282..32930584)
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AA seq
587 aa
AA seq
DB search
MNIPQGFNFPMASLYVGDLHPDVTEAMLYEKFTTVGQVLSLRLCRDSRTKQSLGYGYVNF
NQLAEAERALDTMNFDLLKGKPIRIMWCQRDPSLRKSGIGNVFIKNLDKNIDNKAMYDTF
SAFGNILSCKVALDENGMSKGYGFVHFENEEAANKAIEKTNGMLLNGKKVYAGKFIPKLE
REKSIGEKAKLYSNIYIKNFGNHFTDDQLYQTFSKYGKITSSVVMKNPDGSSKGFGFVAF
EDPKAAEQAVKEMNNREVNGCCLYVGRAQKKTERINELRKVYEQVKLERYARFQSVNLYV
KNLDDSFDNDKLCKEFSQFGTIKSAKVMYEQGRSKGFGFVCYTSPEEATKAVTEMNGRMV
GSKPLYVALAQRKEDRRAFLNNQYMQRLRQQSINFPTTTPPFVLPAVASGPRFYGHINHI
RATPRWPNAAPIRPNGTYLQMMSNPSFRSATRPLQLNNIRNAIHARAITGQQTPTARPNS
KYTSNTPSNMVRSMTMGLGNGGDNPLDANTLNEANQDQKQVLGERLYHVVEKLHPEMASK
ITGMLLEIDNTELIRMIDDQDSLKAKVEEAIAVLQAHKAKKGLVVQD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaatataccacagggattcaattttccaatggcttctctgtatgttggagatttacat
ccagatgtgacagaagctatgttatacgaaaaattcaccactgtcggtcaggtattatct
ttgaggctgtgcagagactcgagaacgaagcaatcgcttggatatggatacgttaatttc
aatcaattggcagaagctgaaagagctttggatacaatgaatttcgatttactgaaagga
aaaccaataagaataatgtggtgtcaaagagacccttcactgagaaaatctggtatagga
aatgttttcataaaaaatctggataaaaacatagataacaaagccatgtatgacacattc
tcggcatttggtaatatattaagctgtaaagtggctctggatgagaatggaatgtcgaag
ggctatgggttcgttcatttcgagaatgaagaagcggccaacaaagccatagaaaagacg
aacggaatgcttctcaacggaaaaaaggtatatgctggaaaatttataccaaagttagag
agggaaaaatcgatcggagagaaagccaagctttactccaacatctacatcaaaaacttt
gggaatcacttcacagacgaccaactataccagacgttctcgaaatacggaaaaataacg
agttctgtcgttatgaaaaacccggatggctcttccaaaggattcggtttcgtcgcattc
gaggacccaaaggccgccgaacaggctgtcaaggaaatgaataatcgcgaagtgaacggt
tgctgtctgtacgttggacgggctcagaagaaaaccgagcggattaacgagttgaggaaa
gtttacgaacaggttaagctggaacgttacgccagatttcagagtgttaatttgtacgtt
aaaaatttagacgattctttcgataacgataagttgtgcaaggagttttcccagtttggt
accatcaaatccgctaaggttatgtacgagcaggggagaagcaaaggtttcggtttcgtt
tgttacacatccccggaggaggcgaccaaggctgtcacggagatgaacggtaggatggtc
ggatccaagcctttgtacgtggctctggcgcagaggaaggaggatagaagggcctttttg
aacaaccagtacatgcaaaggttgaggcagcaaagtatcaacttcccaacaactacgcct
ccgtttgtgcttccagctgttgcgtctggacctagattttacggtcacataaaccacata
agagccactccgcgttggccgaatgctgccccaatacgtccaaacggtacatatttacag
atgatgtcgaatccttcctttcggtcggccaccagacccctccaactgaacaacatacga
aatgccatccacgctagggctataacagggcagcaaacaccaacagctcgtcctaacagt
aaatacaccagtaacacgccgagcaatatggtgcgctctatgaccatgggccttggaaat
ggcggagacaatcccttggacgccaacaccctcaacgaggccaaccaagaccagaagcag
gtgctcggggagcgtttgtaccacgtggtcgagaaacttcatccggaaatggccagcaag
ataaccgggatgctgttggagatcgataacacggaactcattcgtatgatcgacgaccag
gactccctgaaagcgaaggtggaagaagccatagccgtcctgcaagcccacaaagccaag
aagggactagtagttcaagattaa
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