Coccinella septempunctata (seven-spotted ladybird): 123316071
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Entry
123316071 CDS
T07873
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123316071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cset03400
]
123316071
DNA repair and recombination proteins [BR:
cset03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123316071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
123316071
NCBI-ProteinID:
XP_044757939
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Position
6:32945399..32958080
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AA seq
919 aa
AA seq
DB search
MSTTEPTNALNLDLSQQLSFIRFFNSLTEKSSTTIRFFNRTDFYTVHGSDALVISQINGS
TVKYMGEEPKLQYVTLSRSQFELVLRELLLVRQYRVEVFLKQTQGKNNDWQVEYKGSPGN
LSQFEEILFENADIVYSNCVMGIKIVKNRVLAIACVNVAESKFNVCEMVDNDCYTELEAF
IAQISPKECIIPETESNDYTSLKNLLERNGVLVARIKKSDFNASEVLEDLNRLLHFQKGQ
TRNALTYSETQLNEALGSLQALVKFLNLSGDERNFNQYKFETLDLSRFVRLDNAALQALN
VFPLAGTNTVEDTVLVPNSSKSSSLMGVLNHCSTNQGKRLLSQWIKQPLRDQNLINDRLN
VVDCFITDMETRVSLTKDCLPRLPDMLLLVKKLSSKKANLQDCYRIYQTVSGVPYLLKKL
RETGNKHVKSMLVDPISEIIYSLQKYLEMIEQVLDLDLVDRGEFLVKHTFDEQLKDLYKE
KQKYEEKMQKLLRRATDDLGLEDGKVKLECTDQHGYFFRVTLKEEHVLRGNKQYSIIDAV
KGGVRFTNDKLSEINEDYRGLKENYEQQQKAVVEQILDIAAGYAETMRNLNVYIATVDVL
TSFSLASVSAKIPYVRPKLHGSDKGIFKLKKVRHPCLEQQDHISFIPNDAEFDKENDTLH
IITGPNMCGKSTFIRSVGVCVLMAHIGCHVPCESAEISVVDSILARVGADDCQLKGLSTF
MLEMIETSTIVKTATSNSLVIIDELGRGTSTYDGCGIASAIVEYLASEVKCFSLFATHFH
EIISLADKFPNVTNWHVTAVTTNNTITPLYQVREGPCDKSYGIHCARMVGFPEDVLQWAQ
EYQKELEHYEGTRLIEDFEDSLKRELIETGDEIIKKTIQDIASLPTDNLSDEELAQQLQN
IKGEIMSKNNMFLKGLLCE
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtccactacagaacctacaaatgccttgaatttagatttgtcacagcaactgagcttc
ataaggtttttcaatagtttaactgagaaatcatcgaccacgataagattcttcaacagg
accgatttttacacagtccacggctcagacgctctggttatatctcaaatcaatggcagc
accgtcaaatacatgggggaagaacccaaactgcaatacgtcaccctcagcaggtcccaa
ttcgaactggtactgagagagctcctcctggttcggcagtacagggtcgaggtcttcctc
aaacaaacccaggggaagaacaatgactggcaagtggagtataaggggtcgccaggaaat
ctatcccaattcgaggaaatccttttcgagaacgctgacatagtttattcgaattgcgtt
atgggaatcaaaatcgtaaaaaacagagttctagccatagcgtgtgtaaacgtggccgaa
tctaagtttaacgtttgtgagatggttgataacgattgctacaccgagctagaagctttt
atcgctcagataagtcccaaggagtgcatcataccggaaacggaaagcaacgattacaca
tctttgaagaatttgctggagagaaatggagttttggtcgctagaatcaaaaaatcagat
tttaacgcttctgaagttctggaagatctcaatagacttctccatttccaaaagggccag
acgaggaacgctctgacttactccgaaacccaattgaacgaagctctgggatccttgcaa
gccctagtgaaattcctgaatttatccggagacgagaggaatttcaatcagtacaaattc
gaaacgctcgatctatcgcgattcgtgagactcgacaacgctgcactacaagcgctgaac
gtgttcccactagccggtaccaacactgtagaggataccgtcctggtccccaactcttcg
aaatcctccagcttgatgggcgttttgaaccattgttccactaatcaagggaaaaggctg
ctttcccaatggattaagcagcctttgagggatcaaaacttgataaacgacaggttgaac
gtagtggactgtttcataacagatatggaaaccagagtgtcgctaactaaagattgtctt
cctcggctaccagatatgttgttgctggtgaagaaactttcttccaaaaaagccaatttg
caggattgctacagaatttatcagaccgtatctggagttccctatctgttgaaaaaattg
agggaaactggaaataaacacgtgaagtccatgttggtagatcccatttccgagataata
tacagtctgcagaagtatctagagatgatcgaacaggttctagatttggacctggtagat
cgtggggaatttttggtcaagcacaccttcgacgagcagcttaaagatctgtacaaggag
aagcagaagtacgaggaaaaaatgcagaaactgctgagaagggccactgacgacttggga
ttggaagatggaaaggtcaaactagaatgcacagatcaacatggttacttcttcagggta
acattgaaggaggaacatgttttacgtggcaataaacaatacagcatcattgacgctgtc
aaagggggggtacggttcacgaatgacaaattatccgaaataaacgaagattatcgaggt
ttgaaggaaaattacgaacagcagcaaaaagcggtggtcgaacagatactcgatatagca
gctggttacgccgaaactatgcgtaatttgaacgtctacattgcaacggtggacgtgttg
acgtccttctctctggcgtcagtttccgctaaaataccttacgttagaccgaaactgcac
ggttctgataagggcattttcaagttgaaaaaagtccgtcatccttgtctagaacagcag
gatcacatatctttcatcccgaatgacgcggagttcgacaaagaaaacgatactttgcat
ataatcactggtccaaacatgtgcggtaaaagtacttttatacgtagtgtaggagtatgt
gtcctgatggcccacataggttgccatgtgccatgcgagagcgcagaaattagcgtagtc
gacagtattcttgccagagttggagctgacgattgtcaactcaaagggctgtccacgttc
atgttggaaatgatcgaaacatcaactattgtgaaaacagccacttccaattctttggta
atcatagacgagctaggaagaggaacatccacttacgatggttgtggaattgcttctgcc
attgtcgaatatcttgccagcgaggtaaaatgtttctctcttttcgccactcatttccac
gaaatcatcagtttggccgacaagttccctaacgtcacgaattggcatgtcacagccgta
acgaccaataataccataacccccttgtatcaagtgagagaggggccatgcgataagagt
tatggaattcactgcgctcgcatggttggttttcccgaggatgtcttgcagtgggcccag
gaataccagaaagaacttgaacattacgaagggaccaggttgattgaagattttgaggat
tcgttgaaaagagaattgatcgagactggtgatgagataattaaaaaaacgatacaagac
atagcatctctacctacagataatttgtcggacgaagagttagctcaacaattacaaaat
atcaaaggagaaattatgagtaaaaacaacatgtttttgaagggtttattatgtgaataa
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