KEGG   Coccinella septempunctata (seven-spotted ladybird): 123316148
Entry
123316148         CDS       T07873                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cset  Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03030  DNA replication
cset03410  Base excision repair
cset03420  Nucleotide excision repair
cset03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cset00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123316148
   03410 Base excision repair
    123316148
   03420 Nucleotide excision repair
    123316148
   03430 Mismatch repair
    123316148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cset03032]
    123316148
   03400 DNA repair and recombination proteins [BR:cset03400]
    123316148
Enzymes [BR:cset01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     123316148
    6.5.1.6  DNA ligase (ATP or NAD+)
     123316148
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     123316148
DNA replication proteins [BR:cset03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123316148
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     123316148
DNA repair and recombination proteins [BR:cset03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     123316148
   NER (nucleotide excision repair)
    Other NER factors
     123316148
   MMR (mismatch excision repair)
    Other MMR factors
     123316148
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme FERM_N_2
Other DBs
NCBI-GeneID: 123316148
NCBI-ProteinID: XP_044758079
LinkDB
Position
1:41845286..41851621
AA seq 853 aa
MSLIFRSLRTVTSSNRKTHIKVLNCFFSKLRSSPIGGSSENENTSKRSRESNESTPTKSA
EKENGNNQNAKKIKLEASKIKSLHDEPQNNKVLSDEDSPIKRNIKKKKAFDSDSENESTT
EITKPLEPNRTSITPVKEEKLGSIKNSPDSKLKDEDCKEKATKPNSPDNKKKNGIEKSSS
PKPSSSKKTSVEKNNSNLPDTYNPAKTKYHPIKDAIWKREQKIPYLALAKTLMEIEEISS
RLKIIEILSNYFRSCMVLTPEDLLPSVYLCLNKLGPAYEGLELGVAETSLMKAIAQSTGR
TLNQIKSDVKETGDLGTVAEHSRTNQKTLFQPPPLSVRGVFKSLKQIAKMTGHASQSTKI
EEIKKMFVACKEMEARYLIRSLAGKLRIGLAELSVLQALALACATTPPNQDFPPKRLDVS
KEMGADDFKAFYDKLAFTLRNTYCECPNYDLMIPVLLKEGIEKLPEHCKLTPGIPLKPML
AHPTKGVQEVLNRFEGLKFTCEWKYDGERAQIHMDGKTVHIYSRNQENNTSKYPDIISRL
DLCKSENVKSCILDCEAVAWDSENKAILPFQVLSTRKKKGVKEEEIKVQVCVFMFDLLYF
NGESLIKKPFIERRTILKENFKECEGHWYFATYLDTSKMEEVQEFLEESVKGNCEGLMVK
TLEQDATYEIAKRSHNWLKLKKDYLEGVGDTLDVVVIGGYLGKGKRTGTYGGFLLACYDQ
DNEEYQSICKIGTGFTDENLQKHTEFFKDHVVQNPKPYYRFEESLTPDHWFEPVQVWEIK
CADLSLSPIHRAGIGIVDPQKGISLRFPRFIRIRDDKTVEEATSAQQVADMYSGQDQIKN
QQSSVKVSEEDFY
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgtctttaatttttcgttccttgagaactgttacctcatcgaatcgcaaaacacatatt
aaagtgttgaattgttttttctctaaactcagaagcagtccaatagggggatcctcggaa
aacgagaacacaagtaaaaggtcaagagaatctaatgaatctacacctacgaaatctgca
gaaaaagaaaatggaaataatcagaatgctaaaaagattaaattggaagcgtctaaaatt
aagtcattgcatgatgaacctcaaaacaataaagttctgtcagatgaagattctccaata
aaaaggaatataaagaaaaagaaagcatttgatagtgattctgagaatgaatcaactacc
gagataaccaaaccacttgaaccaaataggacaagtataactcctgtgaaggaagaaaaa
cttggatctataaagaattcaccagattctaaactcaaggatgaagactgtaaagaaaaa
gctacaaaacccaattcaccagacaataagaagaaaaatggaattgaaaaatcttcatct
ccaaaacctagtagttcgaaaaaaacttctgttgaaaaaaacaattcaaatcttcctgat
acatacaatcctgcgaaaaccaaatatcatcctataaaagacgcaatttggaaaagagaa
cagaaaattccctaccttgcattggcaaaaactttaatggaaatagaagaaatctctagt
agattgaagataattgaaattttgagtaactacttccggtcctgtatggtactcacccca
gaagatcttctaccctctgtatatttgtgccttaataaattgggaccagcctatgaaggt
ttagaattgggcgttgctgaaacaagtttaatgaaagcaattgctcaatcaactggacgc
actcttaaccagattaaatcagatgtgaaagaaactggcgatttaggtactgtagcagaa
cattcaaggactaatcaaaaaacacttttccaaccaccacctctttctgttaggggcgtt
ttcaaaagtttaaaacaaattgccaaaatgacaggtcatgcatcacagtcaacgaaaatt
gaagaaatcaaaaagatgtttgtggcttgcaaagaaatggaggcaaggtatctgatcagg
tcacttgcgggaaaactgagaataggtttggctgagttgtcagttctgcaagctctagct
ttggcatgcgctacaacgccacctaaccaagattttccaccaaaacgacttgatgtttcg
aaagaaatgggtgccgatgatttcaaagcattttatgataagttagcgttcactttgaga
aacacttactgtgaatgtccaaattatgatcttatgatacccgttctacttaaagagggt
attgaaaaattaccagaacattgcaaactcactccaggaatacctctaaagcctatgttg
gcacatcccactaaaggtgtccaggaagtgctcaacagatttgaaggcctcaaattcact
tgcgaatggaaatatgacggagaaagggctcaaatacacatggatggtaaaacggttcac
atttatagtaggaatcaagaaaacaacacatcaaaatatcctgatattatttctcgctta
gatttatgtaaaagtgaaaacgtcaaatcgtgtattttggattgcgaagctgtcgcttgg
gattctgagaataaagcgatcttgccgttccaagttctgagcactagaaaaaaaaagggt
gtgaaagaagaagaaataaaagtacaagtttgcgtatttatgtttgatctcctttatttc
aacggggaatcgctaattaaaaaacctttcatagaaagaaggaccatattgaaagagaac
ttcaaagaatgcgaaggacattggtattttgctacatatttagatacaagcaaaatggaa
gaggtacaagaattcttggaagaaagtgtcaaaggtaactgtgagggtcttatggtgaag
accttggagcaagatgcaacatacgaaattgccaagaggtcacataactggttgaaattg
aaaaaggattacctagaaggtgttggtgacactcttgatgttgttgtaattggtggttat
ttaggaaaaggaaaaaggacagggacatatgggggcttcctcttggcatgctatgatcag
gacaatgaagaatatcagagtatatgcaagattggaacaggattcacagacgagaatctt
caaaagcatacggaattcttcaaggatcatgttgtacagaatccgaaaccatattaccgt
tttgaagaatctctaacgcctgatcattggttcgagcccgtccaggtgtgggagataaaa
tgtgctgatctttcactttcccctatccatagagctggaattggaatagtggatccccag
aaaggaatctcattgagatttccacgttttattaggataagagatgataagactgttgaa
gaagcgacttccgcccagcaagtagctgacatgtactccggtcaagatcagattaaaaat
cagcaatcttcagtgaaagtgtctgaagaagatttctattga

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