Coccinella septempunctata (seven-spotted ladybird): 123316250
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Entry
123316250 CDS
T07873
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123316250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123316250
03012 Translation factors [BR:
cset03012
]
123316250
Enzymes [BR:
cset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123316250
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123316250
Translation factors [BR:
cset03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123316250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_19
AAA_22
nSTAND3
NPHP3_N
ATPase
ResIII
AAA_14
Hormone_2
Rad17
AAA_16
T2SSE
NTPase_1
SRP54
Sigma54_activat
NACHT
AAA_23
Motif
Other DBs
NCBI-GeneID:
123316250
NCBI-ProteinID:
XP_044758152
LinkDB
All DBs
Position
7:2390270..2397267
Genome browser
AA seq
971 aa
AA seq
DB search
MKRYSEKGAPRDCGSSGFGNDDDEYHLELAKQYIIDHGKNPPRPSHLKGRAIGIWHSKMS
NLKKSLLQQKSPPNSLRKKEKKKFDSSMGDVSLTRAQKFEIKEVLKYVPDQVDCSSNSYS
NIRDSQFKREFLQNINGKLEDHIDSMEVEHQDSNLDQILYDDLKQKHDNQRYSQMLKRRS
TLPCYKVKDDIIKLVDSHQVILISGETGCGKTTQVPQFLLDHFIEKKKGSMCKLVCTQPR
RISAISVAERVAEERAEALGTSSGYQIRLEKICPRNRGSITFCTTGVVLRQMQADPCLSE
YTHIIIDEIHERDIQSDFLITLLKQVMTRRKDLRIVLMSATLNAESFSRYFNDCPHLNIP
GFTYPVEEYFLEDVLLRTKYRFEDASRFKPKKGELPNLNKFYSFIDQHIRQLKERKEYNR
DVYSQLRNPNSEKLDLTLVYELLRYICVKEDDQGAVLIFLPGFSEISDLHKMIETSGKFP
KNRFLVIPLHSQMPTVQQREVFNAPPKGVRKIIISTNIAETSITIDDVVFVIDCGRMKVK
SYDKTTNTETLETMYVSKANASQRKGRAGRVRPGVCFHLISRARYETLETYMLPEILRIR
LENVILTAKILQLGKIEDFFSKLMDSPDPNVVTTSLNLLKRLEALDDNESLTPLGYHLAK
LPLTPQIGKMLLFGALFNCLEPILNIAVVLDYRDPFVLPLGKEKIADKKRKEFANGCQSD
HLFMDKLISTFESLSASERKKFCWEYFLSWSTMTQLVKLKKDFMENLRQLSFVPSAKPNC
RECNCNSENVDLIRAVVCAGLYPNIAITSSKGKRRPFSILRLINNRKVDFHPKSVLANEH
VNSPLIIYYNLVKSSNMYIHDATPVDPFHIIFFGDNFEQITENGQQFIEINSLKFRCKNT
TANVIRALKDKLNNFLEYQISHPNVVDLRGEDEKTQLFRTIIKVLTGEEMKDCQLDEGDG
QEIDLDAEETL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatattctgagaagggtgcacctagagattgtggtagctctggctttggaaat
gacgatgatgagtatcacttagaattagccaaacagtacattattgatcatggaaaaaat
ccgccaaggccttcacatttgaaaggaagagctataggtatatggcattctaaaatgtcc
aacctgaagaagtcgttacttcaacaaaaatctcctccgaattctctgagaaagaaggaa
aagaaaaaatttgatagttcaatgggtgatgtttccttgacgagagctcaaaaattcgaa
ataaaagaagtccttaaatacgtaccagaccaagtagactgttcgtccaactcctacagc
aacatcagagattcgcaattcaaaagggagttcttacagaatataaatggtaaactggag
gatcatattgacagtatggaagtggagcaccaagattcaaacctcgaccaaatattatac
gatgatttgaaacaaaaacatgataatcaaaggtactcacaaatgctcaaacgtagaagt
acgctaccgtgttataaagtgaaggacgatataattaaattggtggattcccaccaagtt
atattaatcagtggtgagactggttgcggtaagaccacacaagtaccccaattccttcta
gaccacttcatcgagaagaaaaaaggttcgatgtgtaagttagtgtgcacccagcccaga
cgaattagtgcaatatcagtggcagaaagggtcgcggaagagcgagctgaagccttagga
acaagttccggctatcagatacgtctcgagaaaatatgcccgagaaacagaggatccata
acgttctgcactacgggagttgttctgaggcagatgcaggccgatccgtgtctctcagag
tacacccatataatcatagacgaaatccatgaaagggacatccaatcagatttcttgata
accctcctgaaacaggtgatgacgagaaggaaagatctcagaatagtcctgatgagtgca
acactgaacgctgagagtttttcacgttatttcaacgattgtccccacctaaatataccc
ggtttcacgtatcccgttgaagagtattttttggaagatgtgctactccggactaagtat
aggttcgaagacgcctccaggtttaaaccgaagaagggcgaactgccgaacctgaataaa
ttctactccttcatcgatcaacacataaggcaactgaaagaacgaaaagagtacaatcga
gatgtgtatagtcagttgaggaatccgaatagtgagaaactggatctgacgttggtatat
gagctactccgatacatttgcgtcaaggaagacgaccagggagctgtgctaatcttcctg
cctggtttctccgagatctccgatctccacaagatgatagaaacgtctgggaaattcccg
aagaatcgctttctagtaattccccttcattcgcaaatgccgactgttcaacaaagagaa
gtgttcaacgcgccccccaaaggcgttcgaaaaataatcatatccaccaacatcgcagag
acctccatcacaatagacgacgtagttttcgtcatcgactgtggtaggatgaaggtgaaa
tcttacgacaagaccaccaacacggaaactttggaaactatgtacgtgtccaaggccaac
gccagtcagaggaagggcagggccggtcgagtgaggccaggggtgtgttttcacctcata
agtagggccagatatgaaactttggaaacgtacatgttgccagaaattctaaggatccga
ttggaaaacgtcatacttacggcgaaaatcctacagttgggtaaaatagaagatttcttc
tcgaaactgatggattccccggatcctaacgtggtaactacgtccttgaaccttcttaaa
cgtttagaagcactggacgataatgaatccttgacgcccttaggttatcatttagccaaa
ctacccctaaccccccagataggtaagatgctcttgttcggagcgctcttcaactgcctg
gagcccatactgaacatagcggtcgtcctggattacagagacccattcgtccttcctctc
ggcaaagagaagattgccgataagaaacgtaaagaattcgccaatggatgccagagcgac
catctattcatggacaaattgatcagcaccttcgagagtttgagtgccagcgaacggaaa
aagttctgttgggaatatttcttgagttggtccacgatgacccaactcgtgaaattgaag
aaggacttcatggagaatctccgtcaattgagcttcgtgccgagcgccaaacccaactgc
cgggaatgcaactgtaactcggaaaacgttgacctgatcagggctgttgtctgcgctgga
ttgtacccgaacatagcgataacaagctcgaaagggaaaaggagaccattcagtatactc
cgtctcatcaacaacagaaaagtcgattttcaccccaaatctgtgttagctaacgagcat
gtaaacagcccgttgataatctattataacctggtgaaaagcagtaacatgtacatacac
gatgcgactccggtggatcctttccatatcatttttttcggagacaacttcgaacagatt
acggaaaatggtcagcagttcatcgagataaattcgttgaaattcagatgtaagaatacc
acagctaacgtgattagggcgctaaaagacaagctcaataacttccttgaataccagata
tcgcaccccaatgttgtggatttgaggggtgaagatgagaaaacgcagcttttcaggaca
ataattaaagttttgactggtgaagaaatgaaagactgccagttggatgagggagatgga
caggaaatagacctagatgcagaagaaacactctga
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