Coccinella septempunctata (seven-spotted ladybird): 123316251
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Entry
123316251 CDS
T07873
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123316251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123316251
03012 Translation factors [BR:
cset03012
]
123316251
Enzymes [BR:
cset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123316251
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123316251
Translation factors [BR:
cset03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123316251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
HA2_C
nSTAND3
AAA_22
AAA_19
ATPase
NACHT
PhoH
AAA_7
Sigma54_activat
TsaE
AAA_11
AAA_23
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
123316251
NCBI-ProteinID:
XP_044758153
LinkDB
All DBs
Position
7:2397830..2405271
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AA seq
917 aa
AA seq
DB search
MYKWKKNYQGNRHFQAQDTKSNFRLPQVFQCLPNARTELRDSSFSIFSRSYFVTSSVDSQ
PIGKINISSEKLDEVNEILRKLQPIADVNYESMENSLFKMNFLEKRTITMDQKMDFFHEK
LEQKSDIDYELFLENNKRYEDPLFMKMYEKRKNLPSFQKRNQIVKMIQENQVVLISGETG
CGKTTQVPQFLLDDYVSSYKGSACKIICTQPRRISAVSVAERVARERGEVLGISVGYQIR
LERVLPRKYGSILFVTNGIVIRLMESDPSLNNISHLIIDEIHERDIHSDFLLTLVKQVIT
RRKDLKVILMSATLNEKRFKEYFDGCTHVEIKGFSHPVEEYYLEDVLERLNFTFAPSMAR
TDSIERNTMIFRHNVVPYVQDLRAENSYSEKVCRELLKPHSEEINLDLIHQLTMHICRNE
GPGAILIFVTGYDDINRLFNLFYELPEEEYMIIALHSEIPMEDQKFVFEPSPSGVRKIIL
ATNIAETSITIDDVVYVIDSGWAKIKVFDPKTNTENLQPRFISKANAIQRKGRAGRLMAG
KCFHLYTRARFEAFYEYQRPEILRCRLESMMLQMKFLQLGKVKVFFNKMLDKPDAKIVEA
ACHLLNELGALDEEEALTPLGYYLAKLPIAPQLGKMLLLGVIFSCLEPILNIAVSLDYKS
PFNLTLKSNSRIPQLDPKMAEFAENVKSDHLLLHKALHLYQTFDKATRSVFCKEYNINKT
VMKMLKKMKVEFMENLFALELVTTTDLKHKDLNINSKNVELIKSIVCGGLYPNIMLACTL
SGQPKTFFKTLNDTKVVLHKKSILSYDRFFTCPLLVFYIKMKTKMDMVFDATVCSPFPVI
FFGTNLRTTKAMNEHCLVVNHKLRFSCDKNASSIVEQLRERLQHYITYRLTHPASMKSDV
EDKFLKIVVDLLASRGS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatggaagaaaaattaccagggaaatcgccattttcaggcccaggatacaaaa
tcaaatttccgactgcctcaagtatttcaatgtctgccaaatgcaagaacggaactgaga
gattcatctttttctatattctcacgttcttattttgtgacctcatcagtggatagtcaa
ccaattgggaaaattaatatatcatccgaaaaactggatgaggtcaatgaaatcttgaga
aagctccagcccatcgcggatgtaaactatgaaagcatggagaattccttattcaagatg
aactttctcgagaagcggacgatcactatggaccaaaaaatggattttttccacgagaaa
ttggaacagaaatcagacatcgattacgaattattcctggagaataacaaacgatacgaa
gatcctcttttcatgaagatgtatgaaaaaagaaagaaccttccgtcgttccagaagcgt
aatcaaatcgttaaaatgatacaggaaaatcaagtggttcttataagtggagaaacgggc
tgtggtaaaaccacacaagtacctcagtttttgctggacgactatgtcagtagttacaaa
ggttcggcgtgcaaaataatctgcacacagcccagaaggataagtgcagtttccgtagct
gaaagagtagccagggaaaggggagaagtactgggaatcagtgttggttatcagattcgt
ttggagagggtccttcctcgaaaatatggttccattttgttcgtcacgaatgggatcgtc
ataaggttgatggagtccgatccatcgctgaacaatatttcacacctgatcatcgacgaa
atccacgaaagggacatccattcggacttcctgctcacgctggtaaaacaggtcatcacc
agaagaaaggacttgaaggtcatcctaatgagcgccacactcaacgagaaacgcttcaag
gagtatttcgacggttgcacccacgtcgaaatcaaaggtttttcccatccagtcgaagaa
tattacttggaagacgtcctggagagattgaatttcacctttgcaccttccatggcaaga
acagacagcatcgaaaggaacaccatgatatttaggcataatgtcgttccttacgttcag
gatctccgcgcagagaattcttattcggaaaaagtgtgtcgggagctcttgaaaccccac
agcgaagagataaacctcgatctgattcaccaattgaccatgcatatctgcaggaacgaa
gggccgggcgctatattaatttttgtcaccggatacgacgatatcaacagactgttcaat
cttttttatgaattgcccgaggaggaatacatgatcatcgccttacactcggagattccg
atggaggatcaaaaattcgtattcgaaccatccccaagtggcgtgcgaaaaataatactc
gcaacgaacattgcagaaacctccataacgatcgatgacgtcgtttatgttattgattca
gggtgggcgaaaatcaaagtcttcgatcccaaaactaacactgaaaacttgcagccaaga
tttatttccaaggctaacgcgattcagaggaaaggcagggccggtcgtttgatggctggc
aaatgtttccatctttacaccagagcgcgtttcgaggctttctacgaatatcaaaggccg
gaaattctgaggtgcaggcttgagagtatgatgctgcaaatgaaatttttacagctggga
aaagtcaaggtgttcttcaataagatgctggataaaccagatgctaagatagttgaagcc
gcctgtcacttactgaacgaactcggcgccttagatgaagaagaggcgctgacgcctttg
ggatattacctggcgaaactccctatagctccccaacttggtaaaatgctgttattgggc
gtgatcttcagctgtttggaacccatactaaacattgccgtcagcctggattacaagagt
cccttcaatctcaccttgaaaagtaacagcaggattcctcaactggacccaaaaatggct
gaattcgcagagaatgtgaagagtgaccatttactcttacacaaagcactccacctctat
cagacgttcgacaaggctacccgatctgtattctgcaaagaatacaatatcaacaaaact
gtgatgaagatgttgaaaaagatgaaggttgaattcatggagaatctgttcgcgttggaa
cttgtgacgactaccgatttgaagcataaggatttgaatattaactctaaaaacgtcgag
ttgatcaaatctattgtttgtggaggattatacccgaatatcatgttggcttgcacctta
tcaggacaaccgaagacattcttcaaaactctgaacgataccaaggttgtactccacaag
aaatccattctgtcctacgataggtttttcacctgtcctctgctggtattttatataaaa
atgaaaaccaaaatggatatggttttcgacgctaccgtatgttctccgtttccagtaata
ttcttcggcaccaacttgcgaaccacgaaagccatgaatgaacactgtttggtggttaac
cataaactgaggttcagctgtgataaaaacgcgtcaagtatagtggaacaattgagggaa
cgtcttcaacactatataacatacagattgacccatcctgcttcaatgaagtctgacgta
gaagataaattcttgaagatagtcgttgatttgctggctagtcggggatcataa
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