Coccinella septempunctata (seven-spotted ladybird): 123316316
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Entry
123316316 CDS
T07873
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123316316
03036 Chromosome and associated proteins [BR:
cset03036
]
123316316
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123316316
Chromosome and associated proteins [BR:
cset03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123316316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
Tex_central_region
S1
HHH_9
Spt6_S1
HHH_3
Tex_YqgF
Tex_N
OB_RRP5_4th
HTH_10
MIMI_R596-like_C
Motif
Other DBs
NCBI-GeneID:
123316316
NCBI-ProteinID:
XP_044758259
LinkDB
All DBs
Position
7:4549633..4557833
Genome browser
AA seq
1788 aa
AA seq
DB search
MSDFIESEAEESSEEEEVEPQERKKLKKSKVDDSSEEEEDDDDRIREELQDLIDDGPVEE
SDGEDSDASRGAKRKKSDDEELDDRLEDEDYDLIEENLGVKVDRRKFKRLKRFEDEGSEE
EEDRDEGQERDAIAMDLFSDDDDEKRSERSHRPAPETEQFGEEEEEGEYSDDDDGFIVDD
DGRPIGDKKRKKRPIFSDAALQEAQETFGVDFDYDEFSKYDQEEYDEEDEDEEEEDDYEE
DGERRRKTKKTRKKATKKSIFEVYEPSELKRGFFTDLDNQIRNTDIPERMQLREVPITAV
PEDSKELDEEAEWIYKQAFCKPTISNMDANLTAEARERQKKGPQTIAKIKKALDFMRNQQ
LEVPFIAFYRKEYVQPELNINDLWKVYKYDAKWCQLKTRKENLGILFEKMRSYQLDLIMK
DPDAPIPDNVRVMKDSDFERLKSVQTPEELQDVYNHFSLYYAGDIPAMQSAWRAKERERK
KEEKRQARLKALAENEEGEQPPEVEEVEEDEPEPESLKAANRSGSYNLCSKAGLDGLAKR
FGLTPEHFAENLRDNYQRHEVDQEAIEPTDLAREYICPTFSTVEEVLQAAKFMVSRQLGR
EPLVRKCVREVFFERAKICVAPTKKGVKMIDETHNCYSMKYVKDKPVRDLTGDQFLKLCL
AEEENLLTITINENFEGNTTNSFIDEVKQLYLKDEFSKNVQDWNDLRAECVESALKKSVL
PDLRMELKRALLAEAKEFVLRACCRKLYNWIKIAPYSINFPDEDEDEWDTSKGVRVMSVA
YVPDYSQAAFTCIAAPDGDITDYLRLPHLTKRKNSWRVEEKLMKESDLTAIRNFIMTKKP
HVVCIGGESREALMIADDIKAVIADLVDNEQFPTIKVEIIDNQLAKIYANSNKGTNDFRD
YPELLRQAISLARQMQDPLIEYSQLCNGDEEILSLRFHSLQDQLDKDALLEALNLEFVNR
TNEVGVNVNMAVQYAHKSNLIQFICGLGPRKGAALLRVLKQTNQRLENRTQLVTSCHMGP
KVFINCSGFIKIDTNSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEYDDDEGTNPA
GALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNCRYKDLRTPFRSANA
EELFDILTKETPETFYIGKMVTAKVIGIARRKPKGEQLDQANPVRNDETGLWQCPFCLKN
DFPELSDVWNHFDAGSCPGQATGIKLALDNGISGYIYIKNISDKQVANPEDRVKIGQLIH
CRIMKIDVERFSVDCTSKSSDLLDKNHEWRPSRDPYYDQERENADLKTETESKANKQRQT
YIKRVIVHPSFHNISFMEAEKCMANMDQGEVIIRPSSKGADHLTITWKVTDGIYQHIDIK
EEGKTNAFTLGKTLIIGGEEFEDLDEIIARHITPMASFARDLLYFKYYKDMNGGQKDKAE
EFIKDERKKNPSKIHYVISASKTCPGKFLLSYMPRNKCRHEFISVTPDGFKFRQQMFDSI
PALFKWFKEHFRDPIPGSATPGTPRTGSARSYSAGGVTPNFNSKSSVLPRVELGIDLVLL
SDMSSEAIQRVAQNLPSHMMQTLSAVASQTPHYPHTPGGAYGANYINTPYTPSGQTPFMT
PYGTPHTQQTPRYGQQTPSQTHMNGPFLHPGSITPAQRTPLYRSSGAQPIPSPVSPQESP
SNHSTRSSSSYHYPMNAQRNEAQDWKSAAAAWAARSAGRNASSGTPRSDISRGTPRSVGN
TKSPRFEDLRDRRSVGKSPRSVRSTPRTNTSPHSMSLGDATPLYDENI
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttattgaatccgaagccgaagaaagcagtgaggaggaggaggtagagcct
caggaacgaaaaaaactaaaaaaatctaaagttgatgatagttccgaggaagaagaagat
gatgatgacagaataagagaagaactccaagatcttattgacgatggtccagtagaagaa
agtgatggtgaagattctgatgcctctcggggtgccaaacggaaaaagtcagatgatgaa
gaattagatgataggctcgaagatgaagattatgatctcattgaggagaatttaggtgta
aaggttgacagaagaaaattcaaacgtttgaaaagatttgaagatgaaggtagcgaagaa
gaagaagatagagatgaagggcaggaaagagatgcaatcgccatggatttattctcagat
gatgatgacgagaaaagatctgagcgcagccatcggccagcccccgaaactgaacaattc
ggtgaggaggaggaagaaggagaatactctgatgatgatgatggtttcattgtcgatgat
gatggaaggcctattggtgataaaaagagaaagaaaaggcctattttctcagatgctgcc
cttcaagaagctcaagaaacctttggtgttgattttgattatgacgaattttcaaaatat
gaccaagaagagtacgatgaagaagatgaagacgaagaagaagaggatgactacgaggag
gatggtgagaggagacgaaagacgaagaaaacgagaaagaaggccaccaaaaaatccatc
ttcgaggtgtacgagcctagcgagttgaaaagaggattcttcacggacctggacaaccag
atccgaaatacagacataccagaacgtatgcaactgcgtgaagtgcctataactgcagtc
ccggaagattctaaggaacttgacgaggaggcggaatggatctacaaacaggcgttttgc
aagcccaccatctccaacatggatgccaatctgacggccgaagctagagaaaggcagaag
aagggaccgcagaccattgccaagatcaagaaagcgttggatttcatgcgaaaccaacaa
ctcgaggtacctttcatcgctttctaccgtaaagagtatgtgcagcccgagctgaatata
aacgacctttggaaagtgtacaaatacgacgccaagtggtgtcagttgaagactcgtaaa
gagaatctgggtatcctttttgagaagatgcgttcctatcaactggatctgatcatgaaa
gatcccgatgctcccataccggacaacgtgagagtgatgaaggactccgattttgagcga
ctgaagagcgtccaaactcccgaagaactgcaggatgtttacaatcatttctcgctgtat
tacgccggtgatatacccgcaatgcagagcgcttggagggcgaaagaaagagagcgaaaa
aaagaggaaaagagacaggccaggttgaaagccttggccgagaacgaagagggagaacaa
cccccagaagtcgaggaagtggaggaggatgaacctgaaccggagtccctcaaggctgcc
aacaggagtggatcgtacaacttgtgctcgaaggctggtttggacggattggccaagagg
ttcggtctgacgcccgagcattttgccgagaatctcagggataactaccagcgtcacgag
gtcgatcaggaagccattgaacctaccgacttggcaagggagtacatatgccctactttc
tccaccgtcgaagaagtgttgcaagctgccaaattcatggtttctcgtcagttgggcagg
gaacctctagtgaggaaatgcgtacgtgaagttttcttcgaacgtgccaagatatgcgtg
gcaccaacgaaaaaaggcgtcaagatgatcgacgaaacccacaactgctacagtatgaag
tacgtcaaggataagccggttagggacctgaccggtgatcaattcttgaaactgtgcctt
gccgaagaggagaacctgctcaccataaccatcaacgagaatttcgagggtaacaccacc
aattccttcatagacgaggtgaaacagctgtacctcaaggatgaattcagtaagaacgtc
caagactggaacgatcttagggcagaatgcgtagagagcgccttgaagaagtcggtcctt
ccggatttgaggatggagctgaagagggcgttgttggcggaagcgaaggagttcgtcctg
agggcttgctgtaggaaactgtacaactggatcaagatcgccccttacagcataaacttc
ccggacgaggacgaggatgaatgggacacttccaaaggtgtcagggtcatgagcgtggcg
tacgtgcccgattattcccaagctgctttcacgtgtatcgctgcacccgacggtgatata
accgattatttgaggcttcctcatctgacgaagagaaagaacagttggagggtcgaggag
aagttgatgaaggaaagcgacttaacggccattaggaacttcataatgaccaagaaacca
cacgtcgtctgcatcggcggtgaatccagggaggccctgatgatcgcggatgacatcaaa
gcggtcatcgccgatctggtggataacgagcaatttccgacgataaaagtcgagatcatc
gacaatcaactggcgaaaatctacgccaactccaacaaaggcaccaacgacttcagggat
tacccggaactgttacgccaggccatatctttagccagacagatgcaagaccccctgatc
gagtactcccaactgtgcaacggcgacgaggagatcctcagtctcaggtttcactccctg
caagatcaactcgacaaagacgcgcttttggaagcccttaatctggaattcgtcaacagg
accaacgaggtaggcgtcaacgtcaacatggcggtgcagtacgcgcacaagagcaacctg
atacagttcatctgcgggttgggcccgcgtaagggggccgccttgctcagggtcctcaaa
cagaccaatcagcgcctggagaacaggacgcaactcgtcacgtcctgtcacatgggtccg
aaggtgttcatcaactgctccggcttcatcaagatcgatacgaacagcctgggcgacagc
accgaggcttacgtggaaattctggacgggagtcgcgtacaccccgagacctacgaatgg
gcgaggaagatggcggtcgacgccctggaatacgacgacgacgaaggtacaaacccggcc
ggcgccttggaagaaatcctggaagcccccgagcgtctgaaagatctcgatctggacgca
ttcgccgaggagttggagaggcaagggttcggcaacaagagcatcaccttatatgacata
agggcggagttgaactgcagatataaggaccttaggacgccgttcaggtcggcgaacgcg
gaagaactgttcgacattctaaccaaggaaacgcccgagaccttctacatcgggaagatg
gtcactgccaaggtgatcgggatcgccaggaggaaacccaagggcgaacagctggatcag
gcgaatccagtaaggaacgacgagaccggtctgtggcagtgtccgttctgtctcaagaac
gattttcctgagttgtccgacgtatggaatcacttcgacgccggttcatgtccgggtcag
gcgaccgggatcaaactagccctggacaacgggatttccggttacatctacatcaagaac
ataagcgataaacaggtggctaatccggaggatagggtgaagatcggtcagctcatccac
tgtaggatcatgaagatagacgtcgagagattcagcgtggattgcacgtctaagtctagt
gatttattggataaaaaccacgaatggcgtccttccagagacccttactacgaccaagaa
agggaaaacgccgacttgaagaccgagaccgaatctaaagccaacaaacagaggcagacc
tacatcaagagggtcatcgtgcacccgtccttccacaacatctcgttcatggaagcggag
aaatgcatggcgaacatggaccagggggaggtcataatccgaccgtcgagcaagggtgcc
gaccatctaaccataacctggaaggtcacagacgggatataccaacacatagacatcaag
gaagagggtaaaacgaacgcgttcaccctgggtaaaacgctcataatcggtggggaggaa
ttcgaggacctggacgaaattatagccaggcacataacgccgatggcgtccttcgcgagg
gacctcctgtacttcaaatactacaaggatatgaacgggggtcagaaggacaaggcggag
gagttcatcaaggacgagaggaagaagaacccgtccaagattcactacgtgatcagcgct
tccaagacttgtcccggaaagttcctgctttcttatatgccgcggaacaaatgcaggcac
gaattcatctcggtcacgccggacgggttcaagttcaggcagcagatgttcgacagcata
ccggccctgttcaagtggttcaaggagcacttcagggatccgatacccgggagtgcgacc
cccggcactccaaggaccggttctgctcgttcttacagtgctggaggtgttactcctaat
ttcaacagtaagtcttcggtgttaccacgggtagaattgggtattgacctagttttgctt
tcagatatgagctcggaggccatacagagggtagctcaaaacctgccgagtcacatgatg
cagacgttgtccgctgtcgcgagtcaaacgccacactatccacacactccaggaggtgcc
tacggtgccaattatatcaatacgccttacacgccgagcggccaaacgccattcatgacc
ccctacggcacgccgcacacccagcagaccccacgctacggccagcaaaccccgagtcag
acccacatgaacggcccgttcctccatcccggctcgataacgccggcccaacgtacgcca
ctgtacaggtcgtcgggggcgcaacccataccgtcgcctgtcagtccgcaagaatctccc
tccaaccattccaccagatcgtcgagcagctaccactatccaatgaacgcgcagaggaac
gaggcgcaagactggaagagcgctgcggcggcatgggctgctagatcggcaggaaggaac
gcatcatccggtacgccaaggtcggatatcagccgcggcacgcctagatccgtcggcaac
accaaatcgccaaggttcgaggatctgagggataggaggagtgtaggaaagagtcctagg
tcggtcagatctactccaaggacgaatacttcccctcattcaatgtcgttgggtgacgcc
accccactttacgatgagaacatttag
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