Coccinella septempunctata (seven-spotted ladybird): 123316390
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Entry
123316390 CDS
T07873
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123316390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123316390
Spliceosome [BR:
cset03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123316390
Complex C
U5 SnRNP specific factors
123316390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
TPR_16
HAT_PRP39_C
TPR_17
HAT_Syf1_CNRKL1_N
TPR_2
CFAP70_TPR_C
FAT
TPR_1
TPR_9
ARM_TT21
ARM_TT21_N
NatA_aux_su
HTH_OrfB_IS605
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
123316390
NCBI-ProteinID:
XP_044758381
LinkDB
All DBs
Position
7
Genome browser
AA seq
933 aa
AA seq
DB search
MSAPPQALVNRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRTKKKDEEEEKEEEEDLNDSNYDEFSGYGGSLFSKDPYDKDDAEADAIYEAIDKRMDE
KRKEYREKRLREELERYRQERPKIQQQFSDLKRDLINVSEDEWKNVPEVGDARNKKERNP
RSEKFTPLPDSVLSRNLGGEVGTSLDPSSGLASMVPGVATPGMLTPTGDMDLRRIGQARN
TLMNVKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNH
PPAWIASARLEEVTGKVQAARNLIMKGCEVNPLSEDLWLEAARINPPDTSKAVIAQAARH
IPTSVRIWIKAADLEEETKAKRRVFRKALEHIPNSVRLWKAAVELENPEDARILLSRAVE
CCPTAVELWLALARLETYENARKVLNKARENIPTDKQIWTTAAKLEEANGNVAMVEKIIE
RAIASLNANGVEINREHWFKEAIESEKGGHIHCCRAIIKTIITYGVEPEDQKHTWMEDAE
HCVNQTAYECARAVYNHALAAFPGKKSIWLRAAYLEKNHGTRESLESLLQRAVAHCPKNE
VLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENHEYERARKLLAKA
RGSAPTPRVLMKSAKLEWSLNDTSAALKLLDEALKVFPNFPKLWMMMGQIHEQLDELPKA
FDSYNSGIKKCPDSIPLWVLLSRLEERRGVLIKARSVLERARLKNPKNDILWLEAIRVEL
RANLKDIANSMMAKALQECPTSGVLWAEAIFMEARAQRKSKSVDALKKCEHDPNVLLAVS
KLFWAERKIGKCREWFQRTLKIESDLGDAWAYWYRFEQLHGTKEQQQEVKQRCLATEPHH
GELWCSISKDIKNVRLSNEQLLEAVAKAVPIPT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctccacctcaagctctggttaatagaaataaaaagcactttttaggtgttcca
gcaccgttaggatatgtagctggtgttggcagaggagctacaggtttcacaactcgttct
gatattggtcctgctcgagatgctaatgatgtgtcagatgatcgccatgcaccacctgca
gctaagagaacaaaaaaaaaggacgaagaagaggaaaaagaagaggaggaagacttgaat
gattctaactacgatgaattcagtggttacggtggttctttattctctaaagatccttat
gataaagatgatgctgaagcagatgccatttatgaggccattgacaaaaggatggacgag
aaaagaaaggaatacagggagaaaagattgagggaagaattagaaagatatcgtcaggaa
agacctaaaatccagcaacagttctctgatctcaagagagatttgataaacgtgtctgaa
gatgaatggaaaaatgtacctgaagtaggtgacgctagaaataagaaagagaggaatcca
aggtcagaaaaattcacgccacttccagatagcgtgctttctagaaatttggggggagaa
gttggcacatctttggacccatcctctggcttagcaagtatggtaccaggtgtcgccact
ccagggatgttaacaccaactggagatatggacttgagaaggataggacaagctagaaat
acattaatgaatgttaaattatcgcaggtttctgattcggttactgggcaaactgttgtc
gaccctaaaggttacttgacagatcttcaatcaatgattcccacctatggaggcgatatc
aacgatattaaaaaggcaaggcttcttctgaaatctgttagagaaacaaatccgaatcat
ccacccgcttggattgctagtgcccgtttggaagaagtcactggaaaagtacaagctgcg
agaaacctcatcatgaaggggtgcgaggtcaatccactcagtgaagatttatggttagaa
gcagccagaataaatcctcccgacacatctaaggcagtaatcgctcaagctgcaagacat
atacccacctctgttagaatttggataaaagccgctgaccttgaagaggaaaccaaagcc
aagcgcagagtgttccgaaaggcactagaacatattccaaactccgtaagattgtggaaa
gctgctgtagaactagaaaatccagaagacgccagaatattgctatccagagctgtagaa
tgttgtccaactgctgtggagctctggttggcgttggcaagacttgaaacttacgaaaat
gcgaggaaagtgttgaacaaagctcgtgagaatatccctaccgataaacaaatttggacc
actgctgctaaattggaagaagctaacggtaatgtcgctatggtggaaaaaattatcgaa
agggccattgcttctttgaatgcgaatggtgttgagataaatcgagagcactggttcaaa
gaggcgattgaaagcgagaagggaggtcatatacattgttgtcgtgctatcatcaaaact
atcatcacttatggggtagaaccggaagatcaaaaacacacgtggatggaagatgcagaa
cattgcgtaaatcaaacagcctacgagtgtgccagggcagtttacaaccatgccctggct
gcgttccctggaaagaagtcgatatggcttcgagcagcatacttggagaaaaaccatggt
accagagaatccttggaatctttactacagagggcggtggctcattgccctaagaacgag
gtactgtggttgatgggtgctaaaagtaaatggttggccggtgacgttccagcagctaga
ggaatcttgtcattggcgtttcaggcgaatccaaacagcgaagaaatttggttggccgct
gtgaagttagaatcagaaaatcacgagtatgagagagccagaaaacttctcgctaaagcc
agaggttctgctccaacgccgagggtgttgatgaaaagtgcaaaactcgaatggtcccta
aatgacacatctgccgccctgaaactccttgatgaagctctcaaagttttccccaacttc
ccgaaactgtggatgatgatggggcagattcatgagcagctggatgaactacccaaagcg
ttcgattcatacaattcagggattaagaaatgtccagactccattccgttgtgggtcctt
ttgtcaagactagaggaaaggaggggagtgttgatcaaagccagatcagttttggaaagg
gcgagattgaaaaaccccaaaaatgatattttgtggctggaggcgatcagggtagaattg
agggcgaacttgaaagacattgccaattctatgatggcgaaagcactacaagaatgtcca
acatctggtgtcttatgggctgaagccatttttatggaagccagagcccaaagaaaatca
aaatcggtggatgccttgaaaaaatgcgagcatgaccccaacgtcctattagctgtgagc
aaactattctgggccgaaagaaaaattggtaagtgtcgagaatggttccagaggaccctc
aaaattgagtccgacttgggtgacgcatgggcatattggtacagatttgagcaactccac
ggcacaaaggaacagcagcaagaagttaaacaaagatgtctcgcaactgagccacatcac
ggtgaactctggtgctctatttcaaaagatataaagaatgttaggttaagtaatgaacaa
ttacttgaagctgtagccaaagctgttccaatacccacttaa
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