Coccinella septempunctata (seven-spotted ladybird): 123318040
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Entry
123318040 CDS
T07873
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123318040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123318040
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123318040
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123318040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
123318040
NCBI-ProteinID:
XP_044760654
LinkDB
All DBs
Position
1:56993869..57012033
Genome browser
AA seq
2361 aa
AA seq
DB search
MNLDSLSFTLSQISYLVASLNKKNQKKVVAELTKLISSFGLEADRHLLQCLFSTVDFSES
TNKVSTSSIQNQVLLEQCSSLLDKPSLITSVCYTVNNQVSNTKSLKLGQQFFQQLSKCLR
LSAVQEVVFALALRHSLNSEVASLAQTHLKASVPALVQSYIDTEGSSRQHEGGLHETSPE
VLYLILTAILKSPKEVGLSNDIHQTFLNTLQRDFPIDIVPVVLAPLVYPEQCELAPDMSS
DGPGLSGGLLDTSLADVITEMGYGFTSSIEECRSNLVKLGGRDLTPSIIARVLSIMCRTH
SGLDDSLNIQQTSSFNISEVRTSWNTDVFVQAVKETIPNFQWKNVFLELDHPDFLIKDRQ
SLILLISALRQGLQSLGFHLETSFPIDQFYKRWNNVDGQFSLIQAILKNSDIFCFADYPC
ISVAVDILKTPPEQDNKDLANWKSLNLVELLLNLSESNLFNQVFELFKFPMHNCPDVLVL
ALLQISAPMTVLRQELLTSLIPIFLVNHPNSAIILHHAWHSANINIRSIIMHAMAEWYAR
GDCDQTRLSRILDVAQDLKALSMLLNAQNAQSYPFIIDLACLASRREYLKLEKWLADKIR
EHGEPFVTACIKFLHRRYPQIIGKIDDPLSKSSPLPTETITTMVLCLQNTLNSVGPDCQE
AILAASNHCSLLMKSRQQPTILRPRVDGAFNATALAGQIYNHTTVDPIPGLSTNLANINL
GGPPSTPFNLQSGLGPLVPSPGSPSRILSAGTSNSPFSMIQMQHQGPVGTSASLVLGVNQ
INNIGRMGPAPAVDKGRLQDYNLFPEISPNVAKDIEDEANSYFQRIYNHPPHPTLTIDEV
LDMLKRFQESSNKREREVFNCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIERGIVTSY
VALGLALRFVLDALKKPEGSKMYYFGIAALDRFKSRLKEYHKYCEHVRAISHFTDFPPHL
QEYVEYGLQSLEPPNKPQGPILPASLAAMLAPNSLQVTQGYKNTPAVSSTAPSKSSTTTT
STLGSRPSIANATNIDTLLVATEKEEKIIVPPDTVQDKTAFIFNNLSQLNLKTKCEELRE
ILSEEYRPWLSQYLVMKRASIELNFHGLYSNFLDTLGIAEVTKLVTKETHRNIRVLLRSD
KVIANFSDRSLLKNLGHWLGILTLGRNKPILQNDLDLKSLLVEAYHKGSQELLYVVPFVA
KVLEASAKSKVFKPPNPWTMAIMNVLAELHQEQDLKLNLKFEIEVLCKNLEIEVGQLKPS
VYLKDPERIKKIEYQLSQQNKKETSVSQVAPTQAVNLSESELSNIGPGQPTNTTPTSATP
APPEPKYSYSDIQLAGMSALSTYAVINQNILLFQTTPQLKSVVKPAIERAVQEWIVPVVD
RSIKISIQTCESIIRKDFALDPDENRMRMAAHYMVRNLTAGMAMITCRDQLLSAINTHCK
QALMNTLNSPTLQQKELVEQAALVIAADNMEVACAYIQKTAVEKAIPEIDKRLMNEYELR
KIARQEGRQYVDQTVYNYQIERMPEPIRLRSTVTPAQMIVYEEYARNIPGFLPNERDSAL
LIPKQQHLESSQLNVVNSFPTSQGIQGEDASIIFEKLLLDLEQFIQAIAAQSQYNHFNAN
MIILRDCLVHTLRSRDIATPQTLVQKCVECLQESLIGGQSDNDPFVLRFKEIIIRILKAL
QDPRFFGQQWMSKFVTRVLMEGRDEFRYNIDAADTLIKSGLINLPQLDLSLAQLMDNGNN
YMAVNFAMQIAQLYLIDDRSNQFITENDLINTIDMLAKIQSHNRSAPEGLGTIIDVLRQN
HEATFFGDRTPFGPTVHIHNGVLQVRAPNYEDPPGLVEKTDYLLREWIGIYNSQPQGRDT
TKQFTMFVHQMNVHGILKTDDLITRFFRLSTQICVETVYRSLTDKSVSMNLTRAKIYHTL
DAFVKLVALLVKHSGEANNTNTKVHLLNKVLGIVAGCLLQDHDTRVIDFHQLPYQRIFTM
LFLELNSPEPVLETINFHVLTAFCHTLHILRPSKAAGFSYAWLELVSHRTFMGRILANSP
QQKGWPMYAQLLIDLFKHLSPFLRNAELAKPVTMLYKGTLRVLLVLLHDFPEFLCDYHYN
FCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLPEISYGPRILANVSIMITPAQ
FKKELDSYLKARAPVTFLSELRSNLQLSSAPGVRYNILLMNALVLYVGSQAISHIRSKGQ
TPNMSTIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEA
NTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWSHEFVRCAPEIEKLFES
VARSCMVQKTSGQPQDGELQE
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagactcgttgtcttttactttgtcacaaataagttatttagttgcctcgttg
aataagaagaaccagaaaaaagtagttgcagaacttacgaagttaatttcttcgtttggt
ctggaggcggaccgtcacttgctccaatgcctattttcaacagtggatttttcggaatct
acaaataaagtatcaacttcttcaattcagaatcaagtgttactggagcagtgttcaagt
ttgttggataaaccatcactgataacatctgtctgttacactgtaaataatcaagtttct
aatacaaagagccttaaattggggcaacagttttttcaacagttgagcaagtgtcttcgc
ctctcagctgttcaagaagttgttttcgctcttgccctacgtcattccctcaacagtgaa
gtggccagtttagcacagactcatttgaaagcaagtgtacctgctttagtgcaatcctac
atcgacacagagggaagcagtagacaacacgagggcggtcttcatgaaacgtccccggaa
gttttgtacttaattttgaccgcaatcttaaaatcgccaaaagaagttggactctcaaac
gatatacatcagacgttcctcaatacattacaacgtgattttcctatagacatagttccg
gtagttctcgcgcctttagtatatcctgaacagtgtgaattagctccagatatgtcttcc
gatggccccggtttatccgggggtttgttagatacatcattagctgatgtcattactgag
atgggatatggcttcacttcaagtatagaagaatgccgatctaatctagtgaaattagga
ggacgtgatttgactccttcaataatagctagggtgttgagtattatgtgccgaacccat
agtggccttgatgactctttgaatatccaacaaactagttcttttaatataagtgaagtc
agaacatcatggaacacagatgtattcgttcaagcagtgaaagaaaccataccgaatttc
caatggaaaaatgtatttttggaactggatcatccagatttcttgatcaaagatcgacaa
agtttgatattactaataagtgcacttcgtcaaggtttacaaagtcttggattccacctg
gaaacatcgttccccatagaccaattttataaaagatggaataatgtggatggccaattc
agtttaatacaggcaatactgaagaattcagatattttctgtttcgcagattatccatgc
atatcagttgcggtggatatactcaaaacacctccagaacaggataataaagatttggcc
aactggaaatccttgaatcttgtcgaattacttctgaatttatcagaatctaatcttttc
aatcaggtatttgaattgttcaaatttcctatgcacaattgtccagatgtgttagtattg
gccttgctacaaatatcggctcctatgacagtactcagacaagaactgttaaccagtttg
attccaatattcttagtaaatcatccaaattccgcgatcattctacatcatgcttggcat
tctgcaaacatcaacattcgttcaattattatgcatgcaatggcagagtggtatgcaaga
ggagattgcgatcaaacaagactttctagaatattggatgttgcccaagatctgaaggct
ctgtcaatgctgctaaatgctcagaatgctcaatcttatcccttcattatagacctggct
tgtttggcgtctaggagagaatatttgaagttggaaaaatggcttgccgacaaaataaga
gaacatggggagcctttcgttacagcttgtataaaatttttacacagaaggtatccacaa
ataatcggtaaaatagatgaccccctttcgaaatcatcacctttacctactgaaactata
actacaatggtgctgtgtctacaaaatacattgaacagtgtcggtccagattgccaagaa
gcaattcttgcggcatctaatcattgttcgctgttgatgaagagccgacaacaaccaacc
attcttaggcctcgggtggatggtgcttttaatgcaacagcactagcaggtcaaatttat
aatcacacaactgttgatccaatacctggtctcagtacaaatttagccaatattaattta
ggggggcctcctagtacaccgttcaatcttcaaagtggtttaggacctctggttccctca
ccaggatctccctctagaatactcagtgccggaacttcaaatagtcctttttcgatgatt
caaatgcaacatcaaggacccgttggtaccagtgcgtctttagttttaggtgtaaatcaa
atcaacaatatcggcagaatgggtcctgctcctgctgtagataaaggtagacttcaagat
tacaacttgtttcccgaaatttcgccaaacgttgccaaagacatcgaagatgaagcgaac
agctattttcagaggatatataatcatcctcctcatcctactttaaccatcgatgaagtt
ctagatatgctgaaaagatttcaggaatcaagtaacaagcgtgaaagagaggttttcaat
tgtatgctcaggaacttattcgaagagtacaaattctttccgcaatatccagacaaagaa
cttcatataacagcacaactttttggtggcataattgaacgaggcattgttacatcgtat
gttgctcttgggctagctcttcgttttgtcttggatgctctcaaaaaacctgaaggatcg
aaaatgtattatttcggcattgctgcacttgacaggttcaaatcgcgcctcaaggaatac
cacaagtactgcgaacatgtcagagcgatatcgcatttcaccgattttcctcctcatctt
caagaatacgttgagtatggcttgcagagtctggaacctccaaataaacctcagggtcct
attttaccagccagtctggcagccatgttggcacctaatagtttacaagttacccaaggt
tacaaaaataccccagcggtcagttccacagcgccaagtaaatcaagtactacaacaaca
agtactttgggatctcgaccatctatcgccaatgcaacaaatatagatacactactagtg
gccactgaaaaagaagagaagataattgtccctccagatactgtacaagacaaaacagct
tttattttcaacaacttaagtcaactcaatttaaaaacgaaatgtgaggaattgagagaa
attttgtccgaagaatacagaccatggttatctcagtacttggtgatgaagagagcctct
atcgaactaaactttcatggcctttattccaatttcctggatactctgggaatagccgaa
gtcaccaaactagttactaaagaaacacacagaaatataagagttttattaagatcagat
aaagttattgcaaatttctcagaccgttctttgctaaagaatttgggccactggttgggt
attctgacactaggaaggaacaaacctatccttcaaaacgatctcgacttgaaatcgtta
cttgttgaggcgtaccataaaggttcccaagaattactttatgtcgtgccttttgttgcc
aaagttctagaggcgagtgcgaaaagtaaagtgttcaaaccacccaacccttggactatg
gccattatgaatgtattggcagagttacatcaagaacaggatttgaaacttaaccttaaa
tttgaaatcgaagtcttatgcaaaaacttggagatagaggttggccagttgaaaccatcg
gtttatttgaaagatccagagaggatcaagaagatcgaatatcagttatcccaacagaac
aaaaaggagacgtctgtatctcaagttgcgccaacgcaagctgtgaatttatccgaatct
gaattgtcgaacatcggcccaggacagccaactaatacgactccaacatctgccacgccc
gccccgccagaaccaaaatatagttacagcgatattcagttggcaggcatgagtgccttg
agtacgtatgctgttataaatcagaacatcctcttgttccaaacaacgcctcaattgaaa
tctgtcgttaagccagcgattgaaagagcagttcaggaatggattgtgccggtagttgac
agatctattaagatatccatccagacctgtgagagcatcatcagaaaagatttcgctcta
gatccagatgagaatcgaatgcgtatggctgctcattatatggtgaggaacctgacggcc
ggcatggccatgataacatgtcgagatcagctactttccgccataaatacacattgtaaa
caagctttgatgaacacattgaattcccccaccttgcaacagaaagaactggttgagcag
gctgctttagtgatagccgccgacaatatggaagtagcttgtgcatatatccagaagact
gcagttgagaaagccatcccagaaatcgataagaggcttatgaacgaatacgaattgagg
aaaattgcaaggcaagagggaagacaatatgtcgaccaaactgtatacaactatcagatt
gaaagaatgcctgaaccaatacgactaagaagtacggtcacaccagcacaaatgatcgtt
tacgaggagtatgccagaaacattcccggttttttaccgaacgaacgggatagcgcgtta
ttgattcctaagcaacagcatttggaaagttcccagcttaatgttgtcaattcttttccg
acttcgcaaggaattcaaggtgaagatgccagcattatatttgagaaactactgttggat
ttggaacaattcatacaggctatagctgctcaaagccagtacaaccatttcaatgccaat
atgatcatactgagggactgtttagtgcatactttacgatcaagagacatcgctacacca
caaacgttagttcagaagtgcgttgagtgccttcaagagtctctaattggaggacagtcc
gacaacgacccgttcgtgttgagattcaaagaaataatcatacgaatattgaaagcgctt
caagatccacgatttttcggtcaacagtggatgagcaagttcgtcactagggtcctgatg
gagggtagagacgaattccgttacaacatagacgccgcggacaccctgatcaaatccggc
ctcataaacctccctcagcttgatctgagcctcgctcagttgatggacaacggcaacaat
tacatggcggtcaatttcgcgatgcagatcgctcagctgtatctgatcgacgacagatcg
aaccaattcatcaccgagaacgacctgataaacacgatcgacatgctggcgaaaatacag
tcgcataatcgttccgcgcccgaaggtctcgggacgataatcgacgtcttgagacaaaat
cacgaggccacattcttcggggataggactccgttcggaccgacagtgcacattcataat
ggtgttctgcaggttagagctcccaactatgaagatccccctggtcttgtggagaaaacc
gattatcttctaagagaatggattgggatatacaattcgcagcctcaaggaagggataca
acaaagcagttcactatgtttgtccatcagatgaacgtgcatggcatactgaaaacggac
gacctgatcaccaggtttttccgcctttccacccagatatgcgtagaaacagtttacaga
agtttgacagacaaatcagtttccatgaacctgacgcgagctaagatttaccacaccttg
gatgctttcgtgaaattggtcgcgttactggtgaaacactcgggcgaagctaataacacg
aacactaaagtgcaccttttaaacaaagttttgggaatcgtagctggatgcctactacaa
gatcacgacacaagagttattgacttccatcagttgccttatcaaagaatttttacgatg
ctctttttggagctcaactctccggagccagttttggagacgatcaacttccacgttttg
acagctttctgtcatacgttgcatatattaagaccaagtaaagcagctggattctcttat
gcttggttggaactagtcagtcatcgaacgttcatggggagaattctggctaactcgcct
caacaaaaaggatggccgatgtacgcgcaattacttattgacctgttcaagcacctatca
cctttcctcaggaatgctgagctggcgaagccagtcaccatgttgtacaaaggaacccta
agagtattactggttctattacatgacttcccggagttcttgtgcgattatcattataat
ttctgtgatgtcatcccaccgaattgtattcaaatgaggaatttgatcttgtctgcattt
cctagaaatatgagactgcccgatccgtttacgccaaacttgaaggtggacatgctgccg
gaaatatcgtatgggcctcgtattttggcaaatgtttcgatcatgatcacgcctgcgcag
ttcaaaaaggagctcgattcttacctgaaagcccgcgctccagtgactttcctttccgag
ttgagaagtaatctacaactttccagtgctccaggagttcgctacaacattcttctaatg
aatgctttggtactatatgtgggcagtcaggctatttcccatattcgtagtaaaggacag
actccgaatatgtcgactatcgcacacagtgcccacatggacatctttcagaatttggct
gttgatttggacactgagggaagatacctatttttaaatgctattgcgaaccagttgaga
tatccaaacagtcacactcattatttctcctgcactttgttatatttgtttgctgaagcg
aacaccgaagctattcaagaacaaattacaagggtcctccttgagcgattgatcgttaat
aggccacacccatgggggttgttgattactttcattgaactgataaagaatcctacgtac
aaattttggagccatgaattcgttcgttgtgccccagaaatcgaaaagttattcgaatct
gtggcccgatcctgtatggtacagaaaacttcagggcaaccacaagatggtgaactgcaa
gaatga
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integrated database retrieval system
