Coccinella septempunctata (seven-spotted ladybird): 123318454
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Entry
123318454 CDS
T07873
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123318454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123318454
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123318454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
123318454
NCBI-ProteinID:
XP_044761008
LinkDB
All DBs
Position
8:complement(28894477..28911422)
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AA seq
722 aa
AA seq
DB search
MFFLRGKQKGPSKTTGFGTAFSTTPATTASTGFSFGSNPAFGASQTPAFGATAQTSAFGA
TAQTPGFGASQTPAFGAPSQTPAFGATSQTPAFGANQTSGFGAAQTSGFGATSQTSGFGS
AFGAGTSTGFGSSFGAPATSAPAFGSTFGGAATSTPSFGFGSTTSTTGGGLFGASTSKPS
LFGAPSTSTPSLFSTPATGGTGLFGATTSQAPNLFGTSTTPSLFGTTTTTSAPSLFGSSF
GTGTAGTGLFGSTGTQSSNLFGGFGSTSSEFAIRIEFVLVNFRRFASTGFTGFGGTTGFG
GTNTAPSLFGSNLGAPFGAKPQEQQTQVSAADNHLQQVLASFYAVNIFNDERDDIIKKWN
MLQASWGTGKGYYGPNQQVQYTSANPLFRFKAVGYNIIIDADNSEGMVKMTFNKKESEIR
AQKDAIVNGISGILGNKPNLTVVVDDIRGLNDNQTEVRIVVSEKGVTGTSRKIPATDLSA
FLNQPAQKQQLTNVGVSYICAYVTPTKSELEEYLSKPPPGIDTQMWEAAKIDNPNPKKYM
PVAINGFTDLKSRMHNQEYETGLHKAFLQKVDKDISELRKKHAASIAQITDLKQKFLQLQ
HRILRVLVKQECTRKVGFTIQPEEELLKGRLETLNAHLNTPTQFKGQLIELMSCIKTVGN
IGRQYNEHYNIDPQVQEDIKQFLQMEQSGISHLINIINTDLQALKIISEGMNQFLKAKAP
LL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttctttttgaggggaaaacaaaaaggtcctagtaagaccactggcttcggcacagca
ttctccacaactccagccaccacagcctccacaggtttcagcttcggctccaacccagca
ttcggggcgtcccaaacgcccgccttcggtgctaccgcccagacctcagcgtttggcgcc
acagctcagacgcccgggtttggcgcgtcccagacgccagcttttggcgccccctctcag
actccagcgttcggcgcgacctctcagacgcccgccttcggcgccaaccagacatcaggt
ttcggcgctgcgcagacgtcaggtttcggtgctacatcgcaaacgtcaggatttgggtcg
gcgtttggtgccggtaccagcacgggttttggaagcagcttcggcgctccagctacttct
gcgccggccttcgggtctacgtttggaggggcagctacctcgaccccctcctttggtttt
ggttccacgactagtactactggaggaggtcttttcggcgcatcaaccagcaagccgagt
ttgtttggggcaccttcaacgtctacccctagtttattctcgacaccagctacaggaggc
acaggactgtttggagcaacaacgtcccaagcacccaacctatttggaacctcaacgact
cccagtcttttcggcaccacgacaacgacatcagcgccctctttattcggttcgagtttc
ggtacaggaaccgcaggtaccggattgttcgggagcaccggaacccaatcgtctaacctt
ttcggcggcttcggttctacctcaagtgagtttgcgattcgaatcgaattcgttttggtt
aactttcgtcgttttgcttctaccggcttcactgggttcggtggtactacaggatttggc
ggaacgaacacagctccatctctgtttggatctaatcttggagcgccttttggtgccaaa
cctcaggaacagcaaactcaagtttctgctgcagacaaccatctccaacaggtattagct
tcattctatgcggtcaatatattcaacgatgagagagatgacatcatcaagaaatggaac
atgttacaagcgagctggggaactggcaaagggtactatggtcctaatcagcaagtgcag
tataccagcgccaatccactcttccgcttcaaggccgtcggctacaacataataattgac
gctgacaattctgaaggaatggtcaagatgacgttcaataagaaggaatcagagataagg
gctcaaaaggatgcaattgtcaacggcatcagtggaatcttgggcaacaaaccaaatttg
acggtcgtcgtggatgacataagggggttgaacgataatcagacggaagtgaggatagtc
gtttccgaaaaaggagtcacgggtaccagtaggaaaataccggcgactgatttatccgct
ttcctgaaccagcccgcacagaagcaacagttgaccaacgtaggcgtgtcttacatttgc
gcctacgtgactcccaccaaatcggaactggaggaatatctgagcaaaccgccaccagga
attgatacgcagatgtgggaggcagcaaagatcgacaatccaaacccaaagaagtacatg
ccggttgccataaacggttttacagacttgaagagccgaatgcacaatcaagagtatgaa
actggtcttcataaggcatttttgcagaaagtggataaggatatatcagagttgaggaag
aagcacgcagcctctattgcgcagattacagatttgaaacagaaattcctgcaattgcaa
cataggatcctcagggttttggttaaacaagagtgcactagaaaagttggtttcactatt
caaccagaggaagagctactgaaaggaagactggaaacacttaatgctcacttgaataca
ccaacacagttcaagggtcaactgatcgaacttatgtcgtgcataaaaactgttgggaac
attggacgtcaatacaacgagcactacaacatagatcctcaagtacaagaagacatcaag
caattcttgcaaatggagcagagtgggatttcacatctgatcaacatcatcaacactgac
ttgcaagccttgaagataatatctgaaggaatgaatcagtttttaaaagccaaagctcct
cttttatga
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