Coccinella septempunctata (seven-spotted ladybird): 123318511
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Entry
123318511 CDS
T07873
Name
(RefSeq) collagen alpha-1(V) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123318511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cset00536
]
123318511
Glycosaminoglycan binding proteins [BR:
cset00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123318511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
123318511
NCBI-ProteinID:
XP_044761080
LinkDB
All DBs
Position
8:30825457..30852004
Genome browser
AA seq
1730 aa
AA seq
DB search
MIWLEDGWCIISTIIFLLARSSHADIAQVDLLDKAELYPSPPGVTITSGRCFNETPTAAP
LNRSYRFDSSSEVILGANDTFPEGFPQNFSILISAKLEKGQTTSVFTLYSDEGEEVLSVI
LGREITLFYDDDTGPDDGNMISFGEDTDDGKWHRVAFSVKGDSVTMIHNCDSTSTRPLVR
SMSSTLTTSGIITIAHELAEDNHFRGELELLKIAPVPDAAYDLCTIHAPDCSSGISSNLE
DRSQDAGLKFAYNSSANGANETEREKDGDGVFAVTPSMDQIPTRPSVFDIPEISGPTPFY
YDYEEGDIDTTIRTSTLTIYPSSNPDTTTVEDSEVTSENFNNSGVETTTMGTEANTTEVK
TTTDPYHGYYDNYYPSYYGAIGPKGDPGRDGIPGTPGMQGPPGHIFLIPMNAQGNEKGPD
SQAETFRQMLAQHMMSMRGSEGPMGLTGTPGLQGPPGPEGVKGEPGDIGEMGPRGIQGPQ
GPPGREGRRGRPGRDGERGITGPPGDKGIQGPPGIPGLPGEKGDRGETGAVGQPGLPGHD
GQQGEEGPPGLPGLPGEMGPRGFSGPRGIPGLPGPPGIPGSDGPPGSKGNTGAPGESGSP
GQSGPPGPVGSPGPEGPLGPPGVIGPPGKPGFPGIPGIDGPPGLPGKPGAPGSKGDTGSQ
GFPGPIGFPGSRGFKGDMGLRGAFGEKGEKGDRGFEGEKGEPGPKGPAGPDGPPGIPGLE
GVEGPKGSDGPRGEAGSMGPPGEKGNMGLPGFPGYSGATGEKGDKGSTGRVGPAGEKGER
GFTGTAGERGETGPRGFRGQRGGRGMHGQPGPKGDTGQPGPVGPPGEMGAQGPEGPRGFS
GAPGPMGQNGKNGPPGPPGERGSPGEPGSVGPAGAPGVIGPPGTTGEVGATGETGPPGPP
GPSGEPGNPGESGKEGPPGLPGPEGKPGLTGPTGLPGFPGERGQNGIPGTPGLKGDQGPP
GLPGTIGDKGQQGEPGKDGAPGPEGRLGPPGPPGPGGAKGERGEAGPPGPTGRDGFPGLR
GLPGGPGPMGPPGEDGDKGDVGPPGEKGFKGSSGEAGPVGHPGPQGPRGEPGAPGLNGEK
GPPGEIGRQGLKGEAGPLGPTGPAGPPGLQGLPGPPGSKGEHGDIGLKGPLGPAGLPGEP
GVRGEKGMDGPVGPPGPEGAQGTKGDSGLPGVEGLPGEPGKDGERGAQGQKGEDGKTGPQ
GPPGGRGLPGPEGPKGNAGPPGFPGPPGEPGLLGPKGEPGTNGEDGKPGEAGPSGERGPP
GEMGPVGPPGKPGMEGPAGAQGNPGPAGEKGDKGMTGAPGLQGILGPQGLPGPQGLPGLR
GPPGVAGDIGVPGNPGVPGAVGQIGAAGDKGPKGDTGGVGPKGHQGDMGLPGAKGDMGEK
GERGQKGDPGPIGPKGNTGPVGPIGLKGNDGPPGLPGMEGPPGPKGSDGQTGMKGEMGPS
GPPGPPGPPAEMPLLPPEVLFQNELVRRRRDLDSLINDYQESVDTDKNDLLEEENDKNID
DQSRKFLSMYNTIYSMRSDLERFRKPLGTKDNPAKSCKDLHFSHPQFQDGWYWVDPNAGM
IDDAIHVFCNMTADGETCVFPDSHSSNMPNIPWSRQGSKSDWYSNLRGGFRITYESTGNV
QLTFLRLSSEIGYQNFTYTCINSVAWFNENDKKYDLSVKFRGYNEQEFSHRKIKPDILED
GCQSRREKSQSIFEVRTTKLYQLPLIDFYPMDYGGHDQAFGFTVGPVCFK
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgatatggctcgaagatggatggtgcatcatttctacaattatattcctattagcacga
tcttcccatgctgatatagcccaagtggaccttttagacaaagcagaactttacccttca
ccccctggagtaacaataacctctggaagatgtttcaacgagacaccaacagccgctcca
ttgaacagatcctaccgttttgatagcagctctgaagtgatcctgggggcaaatgacact
tttcccgaagggtttccacagaatttctccattctgatatcagcgaaattagaaaaaggt
cagaccacgtctgttttcaccctttattccgacgagggagaggaagttctgtccgttatc
ctagggagggaaattaccctcttctacgacgatgacactggacctgacgatgggaatatg
atcagcttcggagaagataccgatgatgggaagtggcatcgagtagcattcagcgttaaa
ggagattctgtcacaatgatacacaactgcgatagtacgtcaacaaggccgctagtaaga
tcgatgtcctcaacattgactacctcaggcataatcacaatagcacatgaactggcagag
gataatcatttcaggggagaactcgaacttctgaagatagcccctgttcccgacgcagcc
tacgatctgtgtacgatacacgctccagattgctcctcggggatatccagtaatttggag
gatcgttcccaggacgccggcttgaagttcgcgtacaactcgtcggcgaatggagccaac
gagaccgaaagagaaaaggacggggatggtgtattcgcagtcactccatctatggatcaa
attccaacaaggccgtctgtattcgacataccagaaatttctggtccaacacctttttat
tatgactacgaagaaggtgatattgacaccacaataaggacgagcactttaaccatctat
ccctcaagtaacccggatacaactactgttgaagattctgaggtgacgtcagaaaatttc
aacaattcaggagtagagactactactatgggaactgaagcaaatactactgaagttaag
acgactaccgacccttaccatggttactacgacaactattatcccagttactatggtgca
attggacctaaaggagatccaggaagggatggtattccaggaactcctgggatgcaaggt
cccccaggtcatatattcttgattccgatgaacgcgcaaggaaacgaaaaagggccagat
tcacaagctgaaactttccgacaaatgctggcacaacacatgatgtccatgagaggatct
gaaggacctatgggtttgacaggaacaccgggtttacaaggacccccaggtcctgagggt
gttaaaggagagccaggagatattggggagatgggacctcgaggtatccaaggaccacag
ggaccaccaggacgtgaaggacgcaggggacgtcctgggagagacggcgaaaggggtata
acaggtcccccaggtgacaagggcatacagggcccacccggtatacccggccttcccgga
gagaaaggcgacaggggagaaacaggagctgtaggccaaccaggccttcctggacacgat
ggacaacaaggtgaagaaggtcctccaggtttaccgggacttccgggagaaatgggtccc
aggggattttcaggaccccgaggcatacctggtttacctggacctccaggcatccctgga
agtgacggacccccaggttcaaaaggtaatacgggagctccaggtgaatcaggttcccca
ggacaatcaggacctcccgggcctgttggatcgccaggtcccgaagggccattaggacca
cctggagtcataggacctcctgggaagcctggtttcccaggtataccgggtatagatgga
cctccgggtcttccaggtaagccaggagcacctggaagcaagggggacactggttcgcaa
ggttttcctggaccaattggatttcctgggtccaggggtttcaaaggggacatgggctta
cgtggagccttcggagagaagggggagaaaggtgatagagggtttgagggggagaaagga
gagcctggaccgaaaggaccagcaggaccagatggtcctccaggtattccaggtttagaa
ggcgtggaaggaccgaagggtagtgatgggcctcgtggagaagcaggatcgatgggtcct
ccaggggaaaaaggaaatatgggacttcccggcttccccggttactctggagccactgga
gagaaaggggataaaggctcaacgggaagagtgggacctgcaggcgaaaagggggagagg
ggattcactggaacggcaggagaaagaggtgaaactggaccaagaggattcagaggacaa
aggggtggacgaggcatgcatggacaacccggacccaaaggcgatactggccaacctggt
cctgttggtccccctggagagatgggggcccagggaccagaaggaccccgtggattcagc
ggagctcctgggccgatgggtcagaatgggaagaatggaccgccaggtccccctggagag
cgtggttcaccaggagaaccaggaagcgtaggtccagcaggagcaccgggcgtcattgga
ccaccaggtacaacgggagaagtaggagcaacaggagaaacaggaccaccagggccacca
ggtccatctggagaacctggcaaccctggcgaatcgggtaaagagggtcctcccggttta
cctggaccagaaggaaaaccaggtctaactggaccaactggtctaccaggatttccaggc
gaaagaggacagaacggaataccgggtacacctggactgaaaggagatcaaggcccacca
ggtcttccgggaaccattggagataaaggacaacaaggcgagcctggtaaggacggcgca
ccgggtcctgaaggtaggttgggtcctccagggccccctggaccaggtggtgcgaaaggg
gagagaggtgaagccggtccccctggtccaacaggtcgggatggttttcctggattgagg
ggactaccaggagggccgggtcctatgggaccacctggagaagatggtgataagggagat
gtcggaccaccgggtgaaaaagggttcaaaggatcatctggagaagctggaccagtagga
catccgggtcctcaaggtcccagaggagaacctggagctccaggactgaatggcgaaaaa
ggaccaccaggggaaatcggtagacaaggccttaaaggcgaggctggacccttaggccct
actggcccagctgggcctccaggtttacaaggattaccaggacctcctggctcgaaaggt
gaacacggagatatcggtttaaaaggtcctttaggacctgccggacttccgggtgaacca
ggggtcagaggagaaaaaggtatggatggaccggttggaccaccaggtccagagggagcc
caggggacgaaaggagattcaggattaccaggtgttgaaggactaccaggagaacccgga
aaagatggtgaacgaggtgctcaaggacaaaagggcgaagacggtaaaacggggcctcaa
gggcctcctggtggtagagggcttcctggtcctgaaggtcctaagggtaacgctggacct
ccaggttttcctggtccacctggagaacctggtttgttaggacccaagggagaacctggg
actaacggggaggatggaaaaccaggggaggcagggccttctggtgaaagggggccacct
ggggaaatggggcctgtaggtccaccaggaaaaccgggaatggaaggaccggctggagct
caaggaaatccaggacctgccggtgagaaaggagataaaggcatgacaggcgcaccgggt
cttcagggtattcttggtccccaaggcttaccaggccctcaaggtttgccaggtttaaga
ggtcctccgggagtggcgggagacattggagtacctggaaatcctggagttccaggtgca
gttggtcaaataggcgccgccggtgataaggggccaaagggtgatacaggtggtgttggc
cccaaaggacatcaaggtgatatgggtctaccaggggccaaaggtgacatgggagagaaa
ggtgaaagaggacagaagggtgaccctggacctataggaccaaaaggaaacaccggacca
gtcggccctataggcctaaagggtaacgatggacccccaggtttacctggaatggaaggt
ccaccaggtcctaaaggatcagatggtcagactggaatgaaaggagagatgggcccatct
ggacctccaggtccacctggacccccggcagaaatgccattgctaccacctgaggttctt
ttccaaaatgaactagttagaagaagaagagatctggatagtttaataaatgattaccaa
gagtctgtcgatacggataaaaatgacctgcttgaagaagagaacgataaaaatatagac
gatcagagtaggaaatttttaagtatgtacaacacaatctacagcatgcgcagtgatttg
gaaaggttcaggaagcctctaggaaccaaagataatccggctaaatcctgcaaagatctg
catttctctcaccctcaattccaagatggctggtattgggtggatccgaatgctggaatg
atagacgatgccatccatgtcttttgcaatatgacagctgatggtgagacgtgtgttttt
cctgacagccacagtagcaatatgcccaacatcccttggagcagacagggtagtaaaagc
gattggtattcaaatttgagaggaggattcaggataacctacgagagtacaggtaacgta
caactgacattcctccggctaagttcagagattggctatcaaaacttcacctacacgtgc
atcaacagtgtggcttggttcaatgagaacgataagaagtacgacttatccgtcaaattt
aggggttataatgagcaggagttttcgcatagaaaaataaaacccgatattttggaagat
ggctgccagagtaggagagagaaaagtcagagtatcttcgaagtacgtaccaccaagttg
tatcagctgcctcttatagatttctatccaatggactacggaggacacgatcaggccttt
ggattcactgtaggtccggtctgtttcaaataa
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integrated database retrieval system
