Coccinella septempunctata (seven-spotted ladybird): 123318646
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Entry
123318646 CDS
T07873
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123318646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123318646
Spliceosome [BR:
cset03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123318646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
eIF2A
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_like
DUF7899
Motif
Other DBs
NCBI-GeneID:
123318646
NCBI-ProteinID:
XP_044761262
LinkDB
All DBs
Position
8:18296686..18299349
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AA seq
503 aa
AA seq
DB search
MSDDEVQYVKKQKTIHYGSLEESERARLEQKDDDKSEDEETNSISQVHTSNEYMELEDAM
SRDKQALLEEFERRKKARSINVSTDDAEVKRNLRQLGEPICLFGEGPAERRSRLREILGR
IGEDAVIRREAEEERKLFEKDQETTWYHEGPESLRVARLWIAEYSLPRAKARLEEARRML
DCPTATKTAKMQELQKKIQVLSIHSSQIGDTRPLSYCQFSPNSKLLATASWSGLCKIWSV
PDCELKQVLKGHTCNVGAIVFHPQATLNLDENVCNMASCASDGSVKLWDLKGKEPIADIE
GHMPHRVSRMGFHPSGRFLGTCCYDNSWRLWDLQQCTEVLHQEGHVKPVHCISFQVDGSV
CATGGLDSFGRVWDLRTGRCIMFMEGHLQWIIGIDFSPNGYHIATASEDNTCKIWDLRKR
NILYTIPAHTNLISDVKFQKDGGDYLVTASYDNTAKLWTNRTWQPLKTLSGHDGKIMCVD
ISPDSQYIATCSYDRTFKFWAPE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaagtacaatatgtcaaaaaacaaaaaactatccattatggatctttg
gaagaatctgaaagagcaaggttagaacaaaaagacgatgataagagtgaagatgaagaa
actaacagcatatcacaagtacacacttcaaatgagtatatggaactcgaagatgctatg
tctagagataaacaagccttactggaggaatttgaaagaaggaaaaaagctcgatctatc
aatgtatccactgatgatgctgaagtgaaaagaaatttgagacaacttggggaacccatt
tgtttatttggcgaaggtcctgcagaaagaagaagcagactgagagaaattttgggccga
ataggtgaagacgcagttatcagaagagaagctgaagaagagcggaaactttttgagaaa
gaccaggaaaccacttggtatcatgaaggacctgaatctctaagagtggcaaggctttgg
atagctgaatattcacttccgagagcaaaggcacgactcgaagaagctagaagaatgctt
gactgtcctactgctactaaaacagccaaaatgcaagagcttcagaagaaaattcaggta
ttgtcgattcattcaagtcagataggtgacacaagaccattatcttattgtcagttcagt
cctaactccaaattgttggcaacagcgtcttggagtggtctttgcaaaatatggtctgta
cctgattgtgaattgaagcaggtattgaaaggacatacctgcaatgtaggagccatagtg
ttccacccacaggcaactcttaatcttgatgagaatgtgtgtaatatggcttcatgtgcc
tctgatgggtctgtcaaattatgggatttgaagggaaaggaaccaattgctgacattgag
ggacatatgcctcacagagtatccagaatgggatttcatccctctggtcgatttctagga
acttgctgctatgataactcctggagattgtgggatttacagcagtgcaccgaggtgctc
catcaggaaggtcatgtgaaacctgtacattgcatatcatttcaggttgacggctctgta
tgtgccacaggtggtttggattcgtttggaagagtatgggatttgaggacaggtaggtgt
atcatgtttatggagggccaccttcaatggataatagggatagacttttcgcccaacgga
tatcatatagccacagcgagtgaagacaacacatgcaaaatttgggatctacgaaaaagg
aacatcctatataccataccagcccatacaaacttgatatccgacgtaaagttccagaaa
gatggaggtgattacttggtaacagcgtcctatgacaatacggccaagttgtggacaaac
cgtacttggcaaccattgaaaacattgtctggtcatgatggaaagataatgtgtgtcgat
atttctcctgacagtcaatatattgctacgtgttcatatgacagaacgttcaagttctgg
gctccagagtga
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