Coccinella septempunctata (seven-spotted ladybird): 123318818
Help
Entry
123318818 CDS
T07873
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cset03037
]
123318818
Cilium and associated proteins [BR:
cset03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123318818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
PUMA_CC
CENP-F_leu_zip
Pox_A_type_inc
HHO5_N
Motif
Other DBs
NCBI-GeneID:
123318818
NCBI-ProteinID:
XP_044761499
LinkDB
All DBs
Position
8:17411840..17493202
Genome browser
AA seq
2051 aa
AA seq
DB search
MSKRLLSRLRARSRSPIYVASEDIFLTTPRDAGVATSELPARGEFPCIDAPVETRTVFGE
QVVTSSSASRRPPLSAATYCDNAGDMSRQQPSSSRKPETTTKPSMADKRRVPSFRSKSRA
ETSSLGGSSRTDGGRLRGDGGGGSSDDDTFNRENSDLRMKLQEEASLYKRRLDQYRQAQS
NQASLISRLQAKVLQYKKRCTELEAQMANNIFPSDQPASLSSRAGLGISGPSSALEQAQM
HLRESREERISDLDTALRKLEEERKKCEALMKLNNNLREQLEESHQTNEALTVDLQKLTN
DWEVLREEMLMKEDEWREEEQVFNDYYSSEHNKLLNLWKDVVTMKRLFLDVQSNTERDLH
KLRSDVEGVGKDVALACDKMETKVGSKMIFDQEKCHQEQAASKLREEIDDLKQQNESYRS
ELALRDERMQELLKDIQTLEERCAEMDQGVSQVGKMQEEIDILQGALRDIAHALIQDAEV
VEPELLMPSHIHLSASTSVPQKSPKRMAHGMASTAAFAESTISAVQAALHKYQSFIHGLQ
VKLQSNKEQLVLVRKQYENSEENVQELEKRAKELIAQLDASRAQCSQLTQDREILQKSLE
ATKLEKNSLDKTRIELAATLENLSSDYQKLQKTAQILQKESETLQDEKIFLQSEIDRLNQ
NIEMGEMNMRSEEDRSSRLREELLTVREELNKLYLSHDMLEQQKLEADILISSLEKTKAE
YELQLDRLMGDKSEVHDSLLKKQNIAAILESDKVKLQEELKKMQDEKTALQLQCNDHQND
IQSLRKELLQAEQQRLDLESDKVSLTEKCKFLEMDKGKIEIELNQVTRERNDLSNQLTVL
GRKRDAINEEVMRLKQKLEQSNETNARVNRNLEELVKECEEKQCTIDSMDKEIQRIQELL
ASMRSEKEALEAVLFDTQTNLEASEIKKTQLDKELQEQMVKQEQLKSQVNRLTKELERSE
KKSMEMKNTMMQQVGSKETEFRQSIEVLKQQNEENVKKLTEERDKIKKNLEKRMQQSLQQ
LGSEKDAEIQQLLDRVESLQNHIDNLCQQHEELMLRAENDKQQALLLAHHDHQALHDRYE
AVRRELEGEKETLERFKREANSRLEQDRININQLKEELNKYKTKLEEAKARTEEEKLKLE
QKIEEVRHEKEVAAGEVENLKIQLNLTENKCSTVTDQLHETIRKLKEVENHSESLRKDLT
DVRRQLADSTFEKEKYHTTNKELRDYIKKTESEKRDQARQLEEYSMKISSLEEMKSSIES
ERNRFQNQVRDLEKDLTQSEHNILSLKEEIQKAQNAGSQQQAEEKELQARLLNEIEERER
SHQEVHQLRKQISELERNLEHCRQELNRALAHTGHLEEQWHSREQDLLIHLEDSRSREKR
LEDQKHNLEVCLVDATQQIQELKAKLGGSEGKVRALETQLSQLESNKRDVEQKLSSVIMT
LRRIAGVQLDGTVTMPYRLMSPSRRWSPARSHEDVRDGVIDVDPEVVRKGVRNLMQQVAH
IERERDDYKNQVDNVKKQLKELSDSQSKGDSKLTKLTQNLRSLQEEKGSLETKLGQKTVE
LQSQTETLNKKTAEVKQMREKIVSLELSVGSGQAEKQQYEEKLEKMKIALSRLEAEKRGL
QDELNRVENRSTKLELQRMSADGDLQRLQMMLQEKEAAIQKLQEKCDSQSRAMASLEERC
MSLKSTIDQLNLSLERAASSESETKSEIQKLQRDLLEATTSSQTGTEKLKQFQKSLSTCE
NERRLLNERFEVTQQNLAELRRNNQILQDQVSRLNQELANNEVVRSSLESQLRLAQWPTE
TTVGGKEEEELHRQLQIVQKERNEFRAKVDSLTTKLRHLENENRNLERCSAKSLSSTGRT
KSYEHPDKYQMDSQHSETEKDKHEQENRELRLKISRLESELTEKELELSRLRSLQRSSLD
GKFDRAEIERYRAAQLQAERLLEAREQSHRQQVARLENQVSLLRDQLNQEIKRRQQYVLR
STQAGREMAQLRQTLGDSLKTVSQDPALDSLLLEHETKRLDHSIAATSLPPSLALPTPSS
SYLRSLTPQPK
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgactcctgtcgagactgcgagcccgatctcgttcgcctatctatgtcgca
tccgaagacattttcttgacgacgccgcgggacgcaggcgtcgcgacgtcggaactgcct
gctcgcggggaattcccctgtatcgacgctccagtcgagacgcgaaccgtgtttggcgaa
caagttgtgacgtcgtcctccgcgtcacgacgaccaccgctttcagctgcgacgtattgt
gacaacgcgggcgacatgtctaggcagcagccgagcagctctagaaaaccagaaactacc
acgaagcccagcatggccgacaagaggagggtgcccagtttccgatcgaaatctagagca
gaaacgagtagtttgggcggaagcagcagaacagacggtggtcgtctcaggggggacggc
ggtgggggcagcagtgacgatgatacattcaacagggaaaattcggacttgaggatgaag
ctacaagaagaagcatcgctttacaagcgaagactagaccaatatagacaggcgcagtct
aatcaagcctccctaatcagcagacttcaagctaaggttctccagtacaagaaaaggtgc
acagagctggaggcgcaaatggcaaacaatatatttccttcagaccaaccagcatctcta
tccagtcgagcaggtttgggcatttctggtccaagcagcgccttggaacaagcccagatg
catttgagagagagccgagaagagagaatatcagacttggacactgctttgcgaaaactc
gaagaagaaagaaaaaagtgcgaggcattgatgaaactgaacaacaacctcagggagcaa
ctcgaagagtcacatcagaccaatgaagccttaaccgtcgatctacagaagctgacgaat
gattgggaagttttgcgtgaagagatgctgatgaaggaagacgagtggagagaggaggaa
caggttttcaacgactactacagctccgagcacaacaagcttctcaatctttggaaggat
gttgtcacgatgaagaggttgttcctggacgttcaatctaacacggaaagggacctgcac
aagttgaggtctgatgtagagggggttggaaaagatgtagcattggcttgtgataagatg
gagaccaaggttggcagcaaaatgattttcgaccaagagaaatgtcatcaggaacaagct
gcctctaaactcagggaagaaatcgacgacttaaaacaacagaatgaatcttacagaagc
gaactagccctcagggatgagagaatgcaagaactgctcaaggatatccaaactttggag
gaaagatgcgcggaaatggaccaaggcgtatcccaagtgggtaagatgcaggaagagatc
gacatccttcaaggcgccctcagagacattgcccacgccctcattcaggatgcagaagtt
gtggaaccggaactattgatgccttcacatattcacctcagtgcctctacctcagtgcct
caaaaatctccgaaaagaatggcccacggcatggcctcgacagctgccttcgctgaaagc
actatatcggccgtacaagcggctttacacaagtatcaatcttttatacatggactacag
gtgaaactccaatcgaataaggagcaacttgtcttagtccgcaaacaatacgaaaactcc
gaagagaacgtgcaggaactggagaaacgggcgaaggaactgatcgctcagctcgatgcc
agtcgagctcagtgttctcaactcacccaagatagggagatccttcagaaatctctggaa
gctaccaagctagaaaaaaacagtctggataagacacgaatagaattggcagcaacgctg
gagaatctcagcagtgattaccagaaacttcagaagacagcccaaatcttgcagaaagaa
tcggagacccttcaggatgagaagattttcttgcagtctgaaattgacagattgaaccag
aatatcgagatgggggagatgaacatgaggtctgaggaagacagaagcagcaggttaaga
gaagagctactgactgtcagagaagaattaaacaaactctacctgtcccacgatatgttg
gagcagcagaagttggaagcagacattctcatatcttctctggaaaaaactaaagctgag
tatgagcttcaactagacagactgatgggtgacaaatcggaagtccacgactccttgttg
aaaaaacaaaatatcgccgcgatcttggaatcagataaggttaaacttcaggaagaatta
aaaaagatgcaagacgagaaaactgcattgcagctgcaatgtaatgatcatcaaaatgac
atacaatcactgagaaaagaactgttgcaagcggagcagcagagactcgatctggagtca
gataaagtatctttaacagaaaagtgcaaatttttggaaatggacaaaggaaagatagaa
atagagcttaaccaagttacgagggaacggaacgatctaagcaaccagctaacagttctt
gggcgtaagagggatgcgataaacgaagaggtcatgagactgaaacagaaattagaacag
tcgaacgaaacgaacgcaagagtgaataggaatttagaagagttggttaaggaatgcgaa
gaaaagcagtgcacgatcgactctatggacaaggagatccaaaggatccaggaactgctg
gcgtcgatgagatcggagaaggaggctttggaagctgtcctgttcgatacccagacaaac
ctggaagcatcggaaatcaagaagacgcaattagacaaagagctgcaagaacaaatggtc
aaacaggaacaacttaaatcccaggtgaaccgcctgacaaaggagctggagagatcggaa
aagaagtccatggagatgaagaacaccatgatgcagcaggtcggcagcaaagagaccgaa
ttcagacagagtatcgaggttttgaaacagcagaacgaggagaacgtgaagaagttgacg
gaggaaagggataaaataaagaaaaatttggaaaaacggatgcagcagtcattgcaacag
cttggtagcgagaaagatgccgagattcagcagcttttggacagggtagagagcttacag
aatcatatcgataatctttgtcaacagcacgaagaacttatgcttcgggccgaaaacgac
aagcaacaggctctccttcttgctcatcacgaccatcaggcccttcacgatcgttacgag
gcagttcgtagagaactagagggcgagaaagaaacgctggaacgattcaagagagaagct
aacagtcgtttggaacaagacagaatcaacatcaatcagctgaaagaagaactgaacaaa
tacaagactaaactggaagaggccaaagcgagaactgaagaggaaaaactcaaactagag
cagaagattgaggaggttcggcacgagaaggaagtagccgcaggagaggtagaaaacttg
aagatccaattgaaccttactgaaaacaaatgcagcaccgtgactgatcagcttcacgaa
acaattcgaaagctcaaagaagtagagaaccattcggagagtctgaggaaagatctgacg
gatgttcgcaggcagctagcggacagtacttttgagaaagagaagtatcacacaacaaac
aaagaactgagggactacataaagaaaacggaaagcgagaagagagaccaggcaagacaa
ctcgaagagtactccatgaaaatatcgagtctagaagaaatgaagtcatctatagagagc
gaacggaatcgtttccaaaaccaggttagagaccttgaaaaggatttaactcaatcggaa
cataatatcctgagcttgaaggaagagatccaaaaggcacagaacgctggatcacagcag
caggcggaagaaaaagagcttcaagccagattgctaaacgaaatagaggaacgggagagg
tctcaccaggaggttcaccagctgcgaaagcagatttccgaactggagagaaacctggaa
cattgcagacaggaactgaatagggccctggcgcatacgggacatcttgaggaacagtgg
cattccagagagcaagatctcctgattcaccttgaggacagtaggtcccgagagaagaga
ctcgaagaccagaagcacaaccttgaggtttgtctggtagacgccactcagcagatacag
gaactgaaggctaaattaggaggttccgaaggtaaagtgcgggcccttgagactcaactg
agtcagctggaatcgaacaagagagacgttgaacaaaaactcagcagcgtgataatgacc
ttgagaagaatcgctggtgtgcagttggatggcacggtgaccatgccgtatagattgatg
agtccatcgaggagatggagcccggcaagatctcacgaagatgtcagagacggcgtcatt
gacgttgatcccgaggtggtgaggaaaggagtgagaaacttgatgcagcaagtggcccac
attgaacgagaaagggatgactacaaaaatcaagtggacaacgtcaagaaacaactgaaa
gaattaagcgacagtcagtcgaagggtgactcgaaacttaccaagctaacccagaaccta
agaagccttcaagaagaaaaaggaagcttggagaccaaactcggtcagaaaaccgtagag
ttacagtctcaaactgagaccctgaacaaaaaaacggctgaagttaaacaaatgcgagaa
aaaatagtatcattggaactatcagttggaagtggtcaagcagagaagcaacaatatgag
gagaaactagagaaaatgaaaatagctttatctcgcctggaggcagaaaaaagaggtctc
caggacgagctgaacagagtcgagaaccgttctacaaaattagaacttcagagaatgtca
gccgatggagatctccagagacttcagatgatgctgcaagaaaaagaagcggctatacag
aaattgcaggagaaatgcgattcgcagagcagagcgatggcgagtctggaggaaagatgc
atgtcgttgaagtcgacgatagatcagctcaatctgtctttggagcgggctgccagcagc
gaatcggaaaccaagagcgaaatacagaagttacagagggatctgctggaagcgacgacg
agttcccaaactggaactgaaaagctcaagcagttccagaaatcgttaagtacttgcgaa
aacgagagacgtttgctcaacgaacgcttcgaagtgacccaacagaatctggcggaactc
agaaggaacaaccaaatcctccaagatcaggtgtccagattaaaccaagaactggcgaac
aacgaggtcgtgcgatccagtttggaatctcaactgagactggcgcaatggcccactgaa
accacagttggtggcaaagaggaagaggaacttcacagacaactgcaaatcgtccagaaa
gagaggaacgagttcagagcaaaagtagacagcctcaccactaagctgaggcatctggag
aacgagaatcgcaacttggagaggtgcagcgccaagtccttgtcctcgacgggaaggacc
aaatcctatgaacatcccgataaatatcagatggacagtcagcatagcgagaccgagaaa
gataagcacgaacaggagaacagagagttgagactgaaaatctcgagattggaatcggag
ctcactgagaaagagctggagctgagcaggctgcgaagtctgcagaggtcgagtctggac
ggtaaattcgacagggcagagatcgaacggtacagggctgcgcagttgcaagcggagagg
ttgttggaagctagagagcagagccataggcagcaggtggctagattagaaaatcaggtg
agtttgctaagggaccaactgaatcaagaaatcaaacgaagacaacagtacgttttacga
agcacgcaagctggaagagagatggcccaattgcgccaaaccttgggcgacagcctcaag
actgtttctcaagatcccgccttggattccttgctgttggagcacgaaaccaagagatta
gatcattccatagcagcaaccagtctacctccatccttagcactgccgaccccttctagc
tcctacctgaggtcattaacgccgcagccaaaataa
DBGET
integrated database retrieval system
