Coccinella septempunctata (seven-spotted ladybird): 123319849
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Entry
123319849 CDS
T07873
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123319849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123319849
Enzymes [BR:
cset01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123319849
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123319849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
123319849
NCBI-ProteinID:
XP_044762771
LinkDB
All DBs
Position
9:complement(17703312..17717761)
Genome browser
AA seq
1633 aa
AA seq
DB search
MSLYRRRNGVMPSNERITNISFSVFTHDELKQVAVKKIVTPLTFDPLGHPIPGGLYDKAL
GPMNDKSDPCGTCQKSFTECPGHMGYIELPLPVINPIFHQLIGTILRMSCLRCFTIQIPG
LIKSTMSIQMRLLDCGMNAEALELENIMFSLAQKLESKESIPEQATQNIDRFDKLCRDKE
GNPGFVVNNTKNTEQLRRQFLANITKFINKGKNCIFCDQACDRIKYQKNRLVLNYKSSKT
KEDDFVVENLMKYVTPNESRGYLRQICKNELDFLVLLAPVLNTGKDMEYPTDIFYFEILP
VPPPMSRPANYVKGKMSEHPKTNAYRAVLQNSIILNTIIYVMKQEGEDLGELSVEAKDVY
LSTKGKTALEKLSDTWEKLQSNIDGILDKDTSRQNEFLGLKQIIEKKEGLLRMHIMGKRV
NFSARSVITPDPNLKIDEIGIPDTFAKQLTYPTYVNSHNIEELRKMVMNGPDVHPGATMV
EFQSGKMIRLDPKNPVQRESIAKRLLTPDEVKNHDYSEQKLVHRHLCNGDILLLNRQPSL
HKPSVMAHKARILRGEKTFRLHYANCKAYNADFDGDEMNAHFPQTERARSEAYTLLNVSN
QYLVPKDGTPLSGLIQDHVISGVKLSMRGQFFNKMDYQHLVFQGLYQKTRSIKLLPPTII
KPVEMWSGKQVLSTIIINVIPDGKELINLTSTSKIKSKDWLNTPSRPWKAGGTPFDDDLE
MSESKVIIRKGELLSGVLDKAHYGATPFGLIHCMYELYGGACATEMLSSLTRLFTMYLQT
KGFTLGVQDIMTLREADKKRRKIIKSQRKVGPEVMKKALNVQNDVSVDEIVEILDKKLVQ
NPNYTALIDREYKSNLNNFTNQMNSVSMSGLLSKFPDNNLQLMVISGAKGTTVNTMQMSC
CLGQIELEGKRPPTMISGKTLPSFPAFEFSPRAGGFIAGRFMTGIDPQDFFFHCMAGREG
LIDTACKTSKSGYLQRCLVKSLEGVHVKSDLTVRDSDNTVIQFLYGQDGMDVCKAQFLSE
KQLPFLHENMGAILDKKVIKAEAKSKRSLEVKDYSKKLKEWMKENGSTLSKRKYRPFTLF
SQFFNETSNRKVTKEQLVQLWQEAGEEVRQSFVDKCQPCPDTLNSRFLPHSHFGSINERL
EALIEGYDGCKGKKDKRNFENMMKQKAMTSLCDSEEAVGLLAAQSIGEPSTQMTLNTFHF
AGRGEMNVTLGIPRLREILMMASKNIKTPSMVIPFLPIEDLERESEALRKKFNRVTVADV
LKDIEVEITSSSRTNSHRYTLKFVFLPHRQYSKDYCVNPKYIIKHMRRKFFKLMFQTIGK
QNRFADLNVIEESRSTDRKARMADDDDDDDAEPASQDMPDPEVDSSDEEPEDEGDAKSRN
KYAQVHDDQETEDEEMEEASIVDEEEEEQNSTKTKIDDNDQEFMDKYKMVEGLTYDHEKY
LWCQMTFSLPFNNTNFDLTSVLKEVAGKSVIWEVPNIKKSITCMKDGVMTLRTDGINIPE
MSKYDHILDLKKLYCNDIHKMIEHCGLGAGMDAIVKEIQDVFEVYGISIDPRHLMLISEF
MTAKGMFEPMNRSGMQSSSSPFQQMSFESSLKFLRDAIIGGKNDSMKNPSSSLMAGGLCD
VGTGGFDVVQRCI
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctaccgaagaagaaatggtgttatgccaagcaatgaacgtattacgaatata
tcattcagtgtattcacacatgatgaactcaaacaagtggccgtaaaaaaaattgttaca
ccattgacattcgatcctttaggtcaccctattcctgggggattatacgataaggcttta
ggtcctatgaacgataaaagcgatccctgtggaacttgtcagaaatctttcactgaatgt
cctggccacatgggctatattgagctgcccttgcctgtaataaatccaattttccaccaa
cttattggcacaattttaagaatgagctgtctacgatgtttcaccattcaaattccagga
ctaatcaagtctacaatgtcgatacagatgagattgctggattgtggaatgaatgctgaa
gctttagaacttgagaatatcatgtttagtcttgcacagaagttggaatctaaagaaagt
ataccagaacaagcaacacaaaatatcgatcgttttgataaattatgcagagacaaagaa
gggaatccaggttttgttgttaataatacgaaaaatactgaacaactaaggcgacaattc
ttggcaaacataacaaagtttataaataagggaaagaattgtatattctgtgatcaggca
tgtgatcgcatcaaatatcagaaaaacagattagttttgaattataaaagtagcaaaact
aaggaagacgactttgtggtagaaaacctgatgaaatatgtaactcccaacgaatccaga
ggttatctgaggcagatttgtaaaaacgaattagatttcctcgttctcttagcgcctgtt
ttaaacactggcaaggatatggaatatccaacggatattttttattttgaaattcttcct
gtacctcctcccatgtctagacctgccaattatgttaaaggaaaaatgagtgagcatcca
aaaacgaacgcctatagagctgtcctacaaaatagcataatcttgaacacgattatttac
gttatgaagcaggagggtgaggatttgggcgaattatccgtggaagcaaaggatgtgtat
ctctcaactaaaggtaaaacggcattggaaaaactgagcgatacttgggaaaaacttcaa
tctaacatcgatggaattttggataaggatacgagtagacagaatgaatttctaggtttg
aaacagattatcgaaaagaaagaaggtctactaagaatgcatataatggggaaaagggta
aacttttccgctaggtccgttatcaccccagatcctaacctgaagatcgacgaaataggc
attccggacacctttgcgaaacaactcacctatcccacttacgtcaattctcacaatatc
gaggaattgagaaagatggtcatgaacggtccggacgtccatccaggagccacaatggtc
gagttccagagcggcaagatgatcagactggatccgaagaaccccgttcaaagggagagt
atcgccaaacggttactgactccggacgaggtgaagaatcacgattacagcgagcagaag
ttggtgcataggcatctgtgcaacggcgatattctcctgttgaacagacaaccgtccctc
cataaacccagcgttatggctcacaaagccaggattctcaggggggagaagacgtttcgt
ctacattacgccaactgtaaagcttacaatgcggattttgacggtgacgagatgaacgcc
cattttccccagactgaaagggctagaagtgaagcttatacgttattgaatgttagcaat
cagtacctcgtacccaaggatggtacccctttgagtggactgattcaagatcatgtgata
tccggggtgaaactttcgatgcgtgggcagtttttcaacaagatggattatcagcacctc
gttttccaagggctctatcagaagacccgttcgataaagctccttcctcccaccataata
aaaccggtggaaatgtggtccggcaagcaggttctatcgaccatcataataaacgtcatc
cctgatgggaaggaactgataaacttgacgtctacatcgaaaattaaatctaaggattgg
ctgaacaccccctcgcgtccttggaaagctggtggaacgcccttcgacgacgacctcgag
atgtccgagtctaaggttataatcaggaagggggaacttctttcgggagtcctggacaag
gcccactatggtgccacaccgttcggtttgatccactgcatgtacgagttgtacgggggc
gcttgcgcgactgaaatgttgagctccttgacgaggctgttcaccatgtacctgcagacc
aagggcttcacgctgggtgtgcaggacatcatgaccctgcgcgaggccgacaagaaacgc
aggaagatcatcaagagccagaggaaggtgggtccggaggtgatgaagaaggccctcaac
gttcagaacgacgtctccgtcgacgagatcgtcgagatactcgacaagaagctcgtgcag
aatcccaattacacggccctgatcgacagggagtacaagtcgaacctgaacaatttcacg
aatcaaatgaacagcgtcagcatgtccggtctgctgagcaagttcccggacaacaacctg
caactgatggtgatctcgggagccaaggggaccaccgtcaacaccatgcagatgtcctgc
tgtctgggccagatcgagctggagggaaagcgcccgcccacgatgatatcgggaaagacg
ctgcccagttttcccgccttcgaattttcccccagagccggcggttttatagcgggcagg
ttcatgacgggcatcgatccgcaggatttcttcttccattgcatggccggcagagagggg
ttgatcgacaccgcctgcaagaccagcaagagcggttatctgcagagatgtctggtgaag
agtctggagggggtgcacgtcaagtcggatctgacggttagggatagtgacaacaccgtg
atacagtttctctacggacaagatgggatggacgtttgcaaggcgcagttcctgtcagaa
aaacaactgcctttcctacatgaaaatatgggcgccattctggacaaaaaagtcatcaaa
gccgaagctaaatccaagaggagcctggaagtgaaagactactccaaaaagctgaaggag
tggatgaaagagaacggaagcaccctgtccaagagaaaatacaggccgttcacgttgttc
agccaatttttcaacgagacctccaacaggaaggtgaccaaggagcagctggtgcagctg
tggcaagaggcgggcgaagaggtcaggcagagcttcgtcgacaagtgtcaaccgtgtccg
gacaccctgaactcacgcttcctgccccacagtcatttcggatcgatcaacgagaggctg
gaggctctgatcgagggttacgacggttgcaaggggaagaaggacaagaggaacttcgag
aacatgatgaagcagaaggcgatgacttcgctgtgcgacagcgaggaagctgttggtctg
ttggccgctcagtccataggggagccgtcgacgcagatgaccctgaacacgttccatttc
gccggcaggggtgagatgaacgtcaccctgggtataccgcgtctcagggagatcctgatg
atggccagcaagaacatcaagacgccgtcgatggtgataccgttcctaccgatcgaggat
ctggaacgcgaatcggaggccctgaggaagaagttcaacagggtgaccgtcgccgacgtg
cttaaggacatcgaggtggagataacctccagctcgaggaccaattcgcacagatacacc
ctgaagttcgtgttcctcccccaccgtcagtactcgaaggactactgcgtgaatccgaag
tacatcatcaaacacatgcgcaggaagttcttcaagctgatgttccagaccatcgggaaa
cagaacagattcgctgacctgaacgtcatcgaagagtccagatcgacggacaggaaggcg
agaatggcggacgacgatgacgacgacgacgcggagcccgcgtcgcaggatatgcccgat
cccgaggtggacagttcggacgaggaaccggaagacgagggcgacgccaagtctagaaac
aagtacgcgcaggttcacgacgatcaggagaccgaggacgaggaaatggaagaggccagt
atcgttgatgaagaggaggaagaacagaatagtaccaagacgaagatcgacgataacgat
caagaattcatggataagtacaaaatggtcgaaggattaacatacgaccacgaaaaatac
ctctggtgtcaaatgaccttttcgctacctttcaacaacacaaactttgatctgacgtcg
gtactgaaggaggtcgccggaaaatctgtgatatgggaagtccccaacataaaaaaatcg
ataacttgcatgaaagacggcgttatgactctgagaaccgatggtataaatataccggaa
atgtccaaatacgaccacatcctggacttgaagaaattgtattgtaacgatatacacaag
atgatcgaacactgcggattgggagctggcatggatgccatcgtcaaagaaatacaggac
gttttcgaagtgtacggtataagcatcgatccaaggcacctcatgctcatttccgagttt
atgaccgcgaaggggatgttcgagccgatgaatcggtcagggatgcagagtagctcctct
cccttccaacagatgtctttcgagtcctccttgaagtttctgcgagatgccataatcgga
gggaagaacgactccatgaaaaatccatccagctcgttgatggccggagggctttgtgat
gttggaactggtggattcgacgttgttcaaaggtgcatttag
DBGET
integrated database retrieval system
