Coccinella septempunctata (seven-spotted ladybird): 123319859
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Entry
123319859 CDS
T07873
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123319859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123319859
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123319859
mRNA degradation factors
5'-3' decay
Decapping complex
123319859
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF6376
Motif
Other DBs
NCBI-GeneID:
123319859
NCBI-ProteinID:
XP_044762800
LinkDB
All DBs
Position
9
Genome browser
AA seq
746 aa
AA seq
DB search
MKNLNQMAESSFFNFPTLKDSEQITLPEDDNCLENEDEYDALNDETFGDLECDSTVDDWE
QQHEKFAEFAKKSSKQDEIVDSLKDLVLSSSPLNLTGNSVWAYTPTPPRNGETTTAIQNL
LPRTLKRLENKAGDEVDAAKTFAAPANLTTVPKICTVEELEKNLIKSNNVPNCPRPPPGY
RAMPPPAVSSYYLPTYPRPPPSFQGHPHHPPYPMGPNRYPPGFPPANMPPPMRHVMYPPR
FRPLPPPHHSFLKGGNMPQRPPPGLPFPNHLNHQGPAHLQRGGMHMMPPHVQNMHPMQQQ
QYHHHLLQQQQQYQLHQGHQMDRRQINDPYRDKNAVRDEYEGLMTAREKQWLLNIQMLQL
NTGTPYFDDYYYTIYKERKARSNKENQQQLLQRHQAGRQRRNSDRQESPLTPKVYTPLQF
ENSLGKLQCGSVMAPRKIIDMDVVSCDKDSENTSVCSRDSKKIKQLLLELEALYSMFLKA
EDLTNPMAISNLKTLKEIKLKQRIRELENATTPEQKREILELVKKDSETVVENPHDYMQK
IVNGLLQEDKFASFMNIRKGKMLLLRLLPAIHSEQFFPQIVEIWGRLLSSIAIIGRRDTA
GDKILPKLYPLFKRYTQTVKMENILDNIHGLMETTKSENNRSTPLGHQSKTPLYFVLMNQ
FGISAMTAFFVRSELLMSTDEVTDVQQATLFGFIQTVADLLSQIPKIPTPLEGMSQVTLN
KLCQRIPNLNPDKTSILRKHFVESND
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttaaatcaaatggctgaatcttcattctttaattttcccacgctgaaagat
agtgaacagataactttaccggaagacgacaattgtttagagaatgaggacgaatatgat
gcgctcaatgatgaaacctttggggacctagaatgtgactcgactgtcgatgattgggag
cagcagcacgaaaaattcgcggaattcgccaagaaatcctccaaacaagatgaaatagtt
gacagtcttaaggacctggtgctgagttcctcccccctaaatctaacgggtaactctgtg
tgggcatacacacctacaccaccacgaaatggcgagaccacaaccgcaatccagaacctc
ttaccgaggacactcaaacgtttggaaaataaggcaggggacgaggtcgacgctgccaag
accttcgccgcccccgccaacctgacaaccgtgcccaagatatgcaccgtggaggaactg
gaaaagaacctcatcaagtcgaacaatgtgccgaactgccccaggcctccgccgggatac
cgggccatgccgccccctgccgtttcctcttattatctaccgacgtatccgcgtcccccg
ccctcgttccagggacacccgcatcatcctccgtatcccatgggcccgaaccggtacccc
cctgggttcccgccagcgaacatgcccccgcccatgaggcacgtgatgtatcctcccagg
ttcagacccctgccgcctccccatcattcgttcctgaagggcggcaacatgccgcagagg
ccgcccccagggctaccgtttcctaatcatcttaatcaccagggaccggctcatctgcag
aggggcggcatgcacatgatgccgccccacgtgcagaacatgcatcccatgcagcaacag
caatatcaccatcatctgctgcaacaacaacaacagtatcagctgcaccagggtcatcag
atggataggaggcagatcaacgacccttaccgcgacaaaaacgccgtcagggacgagtac
gagggactgatgactgccagggagaaacagtggttgttgaacatccagatgctgcagctt
aacaccggaacgccgtatttcgacgattattattacaccatctacaaggaacgcaaggcg
cgtagtaacaaggagaatcagcagcagctgttgcaaagacaccaggcgggacgccagcgt
aggaacagcgaccgacaggagagccccctcacccccaaggtctacacgccgttgcaattc
gagaactccctgggcaaactgcagtgcggctctgtgatggcccccaggaagataatcgac
atggacgtggtcagctgcgacaaggactcggaaaacacctccgtctgctccagggacagc
aagaagatcaagcagctgctgttggagctcgaggcactgtactcgatgttcctgaaggcc
gaagacctgaccaatccgatggccatcagcaacctgaagacgctgaaggagatcaagctg
aagcagcgcattagggagctggagaacgcgaccacgccggagcagaaacgcgagatcttg
gagctggtgaagaaggatagcgagaccgtcgtcgagaatccgcacgattatatgcagaag
atcgtcaacgggctgctgcaagaggacaagtttgccagtttcatgaatattcggaaagga
aagatgttactactgaggcttttaccagcaatacattcagagcagttctttcctcagatt
gtcgagatctggggcaggcttctgtctagcatagccatcatcggaaggagagatacggca
ggcgataaaatcctgcccaagctttatcccttgttcaaaagatatacccagacggtaaag
atggaaaacattctggacaacatccacggattgatggagactaccaagtctgaaaacaac
cgaagtaccccgttgggtcatcaatccaagactcccctctatttcgtactgatgaatcag
ttcggtatatcggccatgacggcctttttcgtgcgcagcgagcttttgatgtctaccgat
gaagttaccgatgttcaacaggccaccctgttcggtttcatccaaacggtggccgatctt
ctgtcgcaaatccccaagataccgacccccttggagggcatgtcgcaggtgacgttaaac
aagctgtgtcagcgtatacctaacctcaacccggacaaaacgtcgatactcagaaagcat
ttcgttgagtccaacgattga
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