Coccinella septempunctata (seven-spotted ladybird): 123319888
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Entry
123319888 CDS
T07873
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123319888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123319888
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123319888
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
EST1
NRDE-2
Motif
Other DBs
NCBI-GeneID:
123319888
NCBI-ProteinID:
XP_044762878
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Position
9:17511384..17515586
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AA seq
709 aa
AA seq
DB search
MTEERLHIDWGNDKLYRTQKQVERNPYDLEAWSILLRECQTKHVSEVRALYEHLITIFPS
ASRYWRIYIEHEMKFRNFERVEKLFQRCLMKILNIELWKLYLAYVKETKASLPTYKEKMA
QAYDFALDKIGMDIHAYSIWNDYVNFLKGVEAIGSYAENQKISAVRKVYQRGIINPMTGM
ETFWKDYIAFEQAINPIIAEKMSIERSRDYMNARRVAKELEVQIRGINRNAPSVPPNGTP
EEKKQVELWQKYIAWEKSNPLRTEDTALLTKRVVFALEQCLLCLGHHPDIWYQTAQFLEY
SCKILAEKGDVNASKLFSEEAANIFERATSSLLSKNQLLYFAYADYEEGRLKYDKVHQIY
SKYLEIPDIDPTLAYIQYMKFARRAEGIKSARAIFKKAREDNRVRYHIFVCAALMEYYCS
KDKNIAFRIFELGLKKFGDVPEYITCYIDYLSHLNEDHNTRVLFERVLSSGSLENEKSVD
IWNRFLEFECNIGDLQSIVKVEKRRSEVLSKIKEFEGKETAQLVDRYRFLDLYPCSAQEL
KSIGYTEVINITSAGRNHVLHSIISGDSESPLPTPDYAQMIPYKPKSNPLPGEHPVPGGS
FPFPPASAHLCTLLPPPSCFKGPFVVIDQLMDVFNRIRLPDTVPQPSEHGDIRLFDLAKS
VHWIMEEGGGIGIKRRRKIGLMDGSDDEDGPLPPMNDIYRQRQQKRVKA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagaacgactccatatcgattggggcaacgataagctttatagaacccagaag
caagttgaaagaaacccttatgacttggaagcttggtctatattattgagggaatgccaa
accaagcatgtatcggaagtgagggctctttacgagcatttgatcacaatatttcccagt
gcttctagatactggagaatatatattgaacatgaaatgaaattcagaaattttgaacga
gtggaaaagcttttccaaaggtgcttgatgaagatactaaatatagaactgtggaaactt
tatttagcctatgtcaaggaaaccaaggcttcactgccaacttacaaagagaagatggca
caagcgtacgattttgctttggataaaatagggatggacatacatgcctactcgatatgg
aacgattacgttaattttctgaagggagtcgaagctatcggttcatatgcggaaaatcaa
aagatctccgctgtgagaaaagtatatcagaggggtataatcaaccccatgaccggaatg
gagacgttttggaaagattatattgccttcgagcaggcaatcaatccgatcatagccgaa
aagatgagtatcgaaagaagtagagattacatgaacgccagacgcgtcgcaaaagaactg
gaggtgcagatcaggggtataaatcgtaatgctccaagtgtacccccaaacggtacaccg
gaagagaaaaaacaggtcgaactgtggcaaaaatacatagcttgggagaagagcaacccg
ttgaggaccgaagacaccgccctgttgaccaaacgcgtggttttcgccctggagcaatgc
ctcctatgtctgggacatcacccggatatttggtaccaaaccgctcagtttttggagtac
agctgcaaaattttggcggaaaagggggatgttaatgcttctaaattgttcagcgaggaa
gcagctaatatttttgagagggccactagctcgttactgagtaaaaatcagcttctgtat
tttgcttatgcggattatgaggaaggccggttgaagtatgataaagtgcatcagatttac
tctaaatatttggaaattccggatatagatccgactttggcatacatacagtacatgaaa
ttcgccaggagggctgaaggtataaagtccgccagagccatatttaagaaggcaagggaa
gacaacagggttcgttaccatattttcgtttgtgctgctctgatggaatattactgcagt
aaagacaaaaacatcgcgttcaggatattcgaattgggcctgaagaagttcggggacgtt
ccggagtatatcacgtgttatatagactacttgtcgcatctgaacgaagatcacaacacc
agggtgttgttcgagagggtattgtcttcgggatctttggaaaacgagaaatcagttgat
atttggaaccgttttctggaattcgagtgtaacattggtgatttgcaaagtatcgtgaaa
gtggagaagagaagatctgaggtgttgtcgaagattaaggaattcgagggaaaggaaact
gcccaattggtggatagatatcgtttcctcgatctgtatccctgttcagcgcaagaactg
aaaagtataggatacactgaagttatcaacataacaagtgccggtagaaatcacgtgctt
cattccattatttctggggattcggagtcgcctttacccactccggactatgcacagatg
ataccctacaagccgaaaagtaacccccttcccggtgaacatccggtaccaggtggctct
ttcccgtttcccccggcatcagcacacttgtgcacgttgctgccaccccccagctgtttc
aaaggtccatttgtggtcatcgatcagctcatggacgttttcaacaggatccgtttaccg
gatactgttcctcaaccgtccgaacatggtgatatccgtctgttcgacctggccaagtcg
gttcattggataatggaagagggtggaggtattggtataaagagaaggaggaagatcggt
ctgatggacggttcagatgatgaagatggtccgttgccacccatgaacgatatatacaga
cagagacagcaaaagagggtgaaggcttga
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