Coccinella septempunctata (seven-spotted ladybird): 123320148
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Entry
123320148 CDS
T07873
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123320148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cset03021
]
123320148
03019 Messenger RNA biogenesis [BR:
cset03019
]
123320148
Transcription machinery [BR:
cset03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123320148
RNA polymerase I system
123320148
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
123320148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
Spt5-NGN
KOW5_SPT5
KOW
KOW7_SPT5
KOW2_Spt5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
DUF3912
RSRP
PUA_4
Motif
Other DBs
NCBI-GeneID:
123320148
NCBI-ProteinID:
XP_044763284
LinkDB
All DBs
Position
9:15370064..15374109
Genome browser
AA seq
1091 aa
AA seq
DB search
MSDSEDSNFSDNENASDAGSVKSGGSAGSVRSRSASRSRSRSVSRSRSRSRSASKSVSRS
RSRSRSKSRSRSKSRSRSRGRSGSEAKEASGAEEVEDEQEPDGESVNSDEYDSEEEDSDA
GGRSKKKKKKDRYGGFIIDEAEVDDEVEDEDEWEDGAPEYGIVANEVDEFGPTAREIEGR
RRGTSMWDAQKEHEIEEYLRKKYADDSAAAKRFGDGGEEMSDEITQQTLLPGVKDPNLWM
VKCRIGEEKSTALHLMRKFLAYQNTNTPLQIKSVVAPEGVKGYIYIEAYKQPHVKSAIEN
VGTLRMGVWKQQMVPIKEMTDVLRVVKEQTGLKLKQWVRLKRGLYKDDIAQVDYFDMAQN
QVHLKLLPRIDYTKLRGALRTTQSDSEAEKRKRKRHPAAKPFDPEAIRAIGGEVSTDGDF
MIFENNRYSRKGFLYKTFSLSAVIVDGVKPTLSELERFEEQPEGIDLELPAEKEDKTASH
SFSAGDNVEVTEGELVNLQGKIISIDGPMISIMPKHEELRDMLVFQASELRKYFQMGDHV
KVLAGRYEGDTGLVVRVESNRVVLISDLTMHEMEVLPKDLQLCTDMASGVDSLGKFEWGD
MVNLDSETVGVIVRLERENFHVLNMHGKVVECRPGSLQKRRLNRFTAALDSFRNSLHRRD
MVKVIDGPHSGFSGEIKHLYRNFAFLHSREFLNNGGIFVCKTKHLQLAGGNKAVANQEIS
TGFEFMSPRRSSPMHPSSGGGSAAGGGFQTPRHGGGGGGHGRVTRDRDLIGTTIRITKGP
YKCNIGIVKDATQTTARVELHSSCQTISVDRNHIADVGTQGRDGSISSYARTPAYTGNQT
PLYRDTGNKTPMHDSGSRTPLHSYGSMTPIHDGSRTPNAHSEWDPAIPNTYPSPGYNPST
PGYQMNGPFTPQTPGTMYENNYSPGYQSAASTPSPSIGYRQSPASNNPYNTPSSGYSPNS
PGMPYNPQTPGAGLDVLPMTDWHTVDLEVTIRDSHGDPGLVGQTGVIRSISGSMCSVFLP
EEDRVVNIMSDHLDPICPQSGDAFKVIIGEEREATGELLSIDRREGVVTIANEVKLMPLQ
NLCKMRVINYE
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactcggaggatagtaatttctctgataatgaaaacgcatctgatgcaggatct
gtgaaatctgggggctcggcgggcagtgtcaggagcaggtccgcctccagaagccgctct
cgttcagtgtctcggtcaagatccagaagtagatcagcaagtaagtcagtgtcgagatcc
aggtctagatcccgttccaagtccagatcacggtccaaatcccgaagtagatccaggggc
cgatcaggatcagaagctaaagaagcttcaggtgccgaagaagtcgaagacgaacaagaa
cctgatggagaatctgtaaattctgatgaatatgatagcgaagaggaggatagtgatgct
ggtggtagaagtaagaagaaaaaaaagaaagatcgatatgggggcttcattattgatgag
gctgaagtcgacgatgaagtagaagatgaagatgaatgggaagatggagcacccgagtat
ggaatcgtggccaatgaagttgatgagtttggtcccaccgctagggaaattgaaggcagg
aggagaggaactagcatgtgggatgctcagaaagagcatgaaattgaagagtaccttcgt
aaaaagtatgccgatgacagtgcagctgctaaaaggttcggggatggaggagaagaaatg
tctgatgagattactcaacaaaccttgcttcctggtgttaaggatcctaatttgtggatg
gtgaaatgtcgtattggagaggagaaatcaacagctctccatttaatgaggaagttctta
gcttaccagaacaccaacactccgttacagatcaagtcggttgttgctccggaaggtgtt
aaaggttacatttacattgaagcctacaagcagccccatgtcaaatcggccatagaaaac
gtaggcacgctcagaatgggcgtttggaaacaacagatggtacctataaaggaaatgact
gatgtattgagggtcgtcaaggaacagacgggactgaaactcaagcagtgggtcagacta
aagagaggcttatacaaagacgatattgctcaagttgattatttcgacatggcccaaaat
caggtccatctgaaactgttgcctaggatcgattatacaaaactgagaggggccttgagg
accacccagtcggattcagaggctgaaaaacgtaaaaggaagcgccatcctgcagccaaa
cctttcgatccagaggccattagagcaatcggaggggaggtctcaactgacggagacttc
atgattttcgaaaacaacagatactctcgtaagggattcctctacaaaactttctcactg
agtgctgtgattgttgacggagttaagccaactctgagtgagcttgagaggtttgaggaa
caacccgaaggtatcgaccttgaattaccggctgagaaagaagataagacggcatcccat
tcgttcagtgccggagacaacgttgaggtcacggaaggtgaattggtgaatctacagggt
aaaataatcagcatagacggaccgatgatatcgataatgcccaaacacgaggaattgcga
gacatgttagtgttccaagcttcggaattgaggaagtacttccagatgggggatcacgtt
aaggtactagccggaagatatgagggggatacaggactggtggtcagggttgagagtaat
agggtagttttaatatccgacttgacgatgcacgaaatggaggttttaccgaaggatctt
caactttgtaccgatatggcaagcggtgttgattccctcgggaaattcgaatggggggat
atggtgaatctagattcggaaactgttggggttatcgtgagattggaaagggagaatttc
cacgttttgaacatgcacggtaaagtagtcgagtgcaggcctggttcgttgcaaaaacga
cgtttgaaccgtttcacggccgccttggactccttcaggaacagccttcaccgcagggat
atggtcaaggttatagacggtccacattccggtttctccggagagatcaagcatttgtac
aggaacttcgccttcctgcactcgagggaattcttgaataacggaggtatattcgtgtgc
aaaacgaagcatcttcaactggctggcggtaacaaggctgtggccaaccaggagatatcg
actggtttcgagttcatgtccccaagacggagctcaccgatgcatccttcgagcggtggg
ggatcagccgctgggggcggttttcaaactcccaggcacggtggtgggggtggcggacat
ggaagggtcacgagagacagggacctcatcggtacaaccatcaggatcaccaagggaccg
tacaagtgcaacatcggtattgtcaaagatgccacccagaccacagcacgtgttgagcta
cactcgtcatgccagacgatttcggtggataggaatcacattgctgatgttggtactcaa
ggacgcgatgggagcatttcgagctacgctagaaccccggcttacaccggaaaccagacc
ccgctatacagggacaccgggaacaagacccccatgcacgattctggttctcgtactccg
ttgcacagctatggcagcatgacgcctattcacgacggatccaggactccgaacgcccat
tcggaatgggaccctgccataccaaacacctatccatctccgggctacaaccccagcacc
cctggttatcagatgaacggaccgttcaccccgcaaactcctggcaccatgtacgagaac
aactacagtccaggctatcaaagtgcagcgtcaacgcctagcccgtctattggctacaga
caatcgccagccagtaacaatccttataacactccgagctcagggtacagccccaacagt
ccaggtatgccatacaaccctcagacgccaggtgccggtctcgatgttcttcctatgacc
gactggcatacggtggacttagaggtcacgattagggacagtcacggtgatcctggactg
gtcggacaaactggagtcatcagaagtatatctggttcgatgtgttctgtctttttgccc
gaagaagatcgtgtcgtcaacattatgtcggatcacttggatcccatctgtccccaaagt
ggggatgcttttaaggtgatcattggggaggaaagggaagccacaggagaacttctttct
attgacaggcgtgaaggcgttgtcaccattgcaaatgaggttaagctcatgcctctgcag
aatctatgcaagatgcgagttatcaattatgaataa
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