Coccinella septempunctata (seven-spotted ladybird): 123320588
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Entry
123320588 CDS
T07873
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123320588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123320588
Spliceosome [BR:
cset03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123320588
Complex C
U5 SnRNP specific factors
123320588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
123320588
NCBI-ProteinID:
XP_044763881
LinkDB
All DBs
Position
1:70262557..70289631
Genome browser
AA seq
2366 aa
AA seq
DB search
MSIPPYLMGPNPWAAMMAQQQLAAAHAQAQAHAAAAQAHAHALQQQMPPPHPKPDVMTED
KLQEKSQKWQQLQSKRFADKRKLGFVEAQKEDMPPEHIRKIIRDHGDMSSRKYRHDKRVY
LGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIAQWGTMW
IMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDADEDSAIAKWFY
DHKPLVGTKYVNGSTYRRWNLTLPMMATLYRLGNQLLTDLVDNNYFYLFDTKSFFTAKAL
NMAIPGGPKFEPLIKDMNPADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNMPHFVHL
SWYHTPNVVYIKTEDPDLPAFYFDPLINPISHRHAVKSLEPLPEDDEEYILPDTVQPFLQ
ETPLYTDNTANGIALLWAPRPFNMRSGRCRRAIDIPLVKSWYMEHSPPGQPVKVRVSYQK
LLKYYVLNALKHRHPKPQKKRYLFRSFKATKFFQTTNIDWVEAGLQVCRQGYNMLNLLIH
RKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNV
DAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVSKGPGCGF
WAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASV
MHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMKADW
WTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAI
YTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQ
AYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVVPLEKITDAYLDQYLWYE
ADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLAEVWDVGEGECNVLLESKFEKLYEKID
LTLLNRLLRLVVDHNIADYMTAKNNVVINYKDMNHTNSYGVIRGLQFASFITQYYGLVLD
LLVLGLQRASEMAGPPQMPNDFLTFQDVQTETCHPIRLYCRYVDKIHMFFRFSAEEARDL
IQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQ
WENSFVSVYSKDNPNLLFNMSGFECRILPKCRTQHEEFNHRDGVWNLQHEGSKERTAQCF
LRVDDESMGRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLV
KCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVG
ITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLE
DSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNN
YRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQI
PNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESI
VMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADTK
DTMDNTTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAY
NLHSAYGNWYPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYG
ELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAG
QKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSEL
QLPFQACLKIEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTER
TKVILKPDKTTITEPHHIWPTLSDDEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRD
IILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETQTFSS
KTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQISAFLY
GVSPPDNPQVKELRCLVLPPQWGTHQTVHIPNTPPNHPFLKDMEPLGWIHTQPNELPQLS
PQDITTHAKLMGDNPNWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGRQNTDKGNNPK
GYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPSMKYELQLANPKEFYHEVH
RPAHFLNFSSLEDGDGSGADREDAFA
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcccccttatttaatggggcccaacccctgggccgcaatgatggcccagcaa
caattagcggctgctcatgcacaagctcaggctcatgctgccgcagctcaggcacacgct
catgctttgcaacagcagatgcctccaccacatccaaaaccagatgtgatgacagaggat
aaactccaggaaaaatcacagaaatggcagcaacttcaatcgaaaagatttgccgataaa
cgtaaactgggattcgttgaggcacagaaggaggacatgcctcccgagcatatcagaaag
attattagagatcacggtgatatgagcagcaggaaatacagacatgataagagagtctac
cttggggctctgaaatatatgccgcatgcggttatgaagctgttggaaaatatgccaatg
ccctgggagcagatacgagatgttaaagtactgtatcatattacgggagctataacattt
gtgaatgaaataccatgggtgattgagcctgtttatattgctcagtggggaacaatgtgg
attatgatgaggagggaaaaaagagatcgtcgtcatttcaaacgtatgaggtttcctccg
ttcgatgacgaagaaccccctttagattatgctgataacgtattagatgttgaaccttta
gaggccattcaaattgagttagacgccgatgaggattctgcaattgccaagtggttttac
gatcacaaaccgttagttggcactaaatatgtgaacggttccacttatagaagatggaat
ctaaccctaccaatgatggctaccctttataggctgggaaatcagttattaacggattta
gttgataataattacttctatctcttcgataccaaaagtttcttcacagccaaagccttg
aacatggctattcccgggggtccaaaatttgaaccattgataaaggatatgaatcctgcg
gatgaagattggaatgagtttaacgatattaataagataataattagacaacctatcaga
acagaatacaggatagcttttccgtatctttacaataacatgccacatttcgtccatctg
tcttggtaccacactcccaatgtagtctacatcaaaactgaagatcccgatctgcctgcg
ttctatttcgatcctctgatcaatcctatttcccatcgccacgccgtcaagagtttggaa
cctctacccgaagacgacgaagagtatattttacccgataccgtacaaccgttcttgcaa
gaaactcccttgtacaccgacaacacagccaacggtatagctctcctgtgggccccgaga
cctttcaacatgagatcaggtcggtgccgaagagccatcgatattcccctggtgaaaagt
tggtacatggaacacagccctcccggccaacccgtgaaggtccgcgtcagttaccagaaa
ctcttgaagtactacgtcttgaacgccctcaaacacaggcatccgaagccgcagaagaag
aggtacctcttcaggtcgttcaaggccaccaaattcttccaaaccaccaacatcgactgg
gtggaggccggtttgcaggtctgcagacagggctacaacatgctcaatctgctcattcac
cgaaagaacctgaattacctccatctggattataatttcaacctgaagccggtgaagact
ttgacgacgaaggagaggaaaaagtccaggttcggaaatgcgttccatctgtgcagggag
attttacgattgacgaaacttataatagattctcacgtgcagtacaggctgaacaacgtg
gacgcttttcaactcgccgacggtcttcagtatatttttgcacacgtgggtcagttgacg
gggatgtaccgttacaagtacaaacttatgaggcaaatccggatgtgcaaggatctgaag
catctgatctattacagattcaatacgggtcccgtgagcaaaggtccgggatgcggtttc
tgggcccccggttggagagtgtggctgttcttcatgcgcggcataacccccctgttggag
aggtggctcggaaacctgctgtcgcgtcaattcgaaggtcgtcactccaaaggcgtggct
aagacggtcaccaaacagagggtggagtctcatttcgatctcgaactgagggcgtccgtc
atgcacgacatcgttgatatgatgcccgagggcatcaagcagaacaaagccaggaccata
ctgcaacatttgtccgaagcttggagatgttggaaggctaatattccgtggaaagtgccc
ggtttaccgattcccatagaaaacatgatccttcgttacgtgaaaatgaaggccgattgg
tggaccaacacggcccattataacagggagagaatccgtcgtggcgcaactgtagataag
accgtttgtaagaagaacttgggccgactgaccaggttatatctgaaggcggaacaggaa
cgccaacataactacctgaaggacggtccgtacatctcccccgaagaagctgtcgcgatt
tacacgaccacggtgcactggttggaatccaggaggttcgcgcccatacctttcccgcca
ctgtcgtacaagcacgacaccaaactcttgattctggcgttggaaaggctaaaagaggcg
tacagcgtgaaatccaggctgaaccagagtcagagggaggaattgggactgatcgaacag
gcctacgataatccccacgaggcgctgtccaggataaaacgtcatctgttgacgcagcgc
gcgttcaaagaggtgggtatcgagtttatggatctctacagtcacctgataccggtctac
gatgtcgtacccctggagaagataacggacgcgtacttggatcagtatttgtggtacgaa
gccgataagcgaaggttgttcccgccctggatcaaacccgccgatactgaaccgccgccg
cttttggtatacaaatggtgtcaaggcatcaacaacctggcggaagtgtgggacgtgggc
gagggcgagtgcaacgtcttgctcgagtcgaaattcgaaaagctctacgaaaaaatcgat
ctgaccctcctgaacagactgctacgtctggtcgtcgatcacaacatcgccgattacatg
acggcgaagaacaacgtcgtcatcaactacaaggacatgaaccacacgaacagttacggc
gtcatcaggggactgcagttcgcctctttcatcacccagtactacggtctggtgctggac
ctgttggtgctcggtctgcagagggccagcgagatggccggcccgcctcagatgcccaac
gatttcctcaccttccaggacgtccagacggagacatgccatccgatacggctgtattgt
cgttacgtcgataagatccacatgttcttcaggttttcagctgaagaggcccgggacctg
atccagagatacctgacggaacaccctgatccgaacaacgaaaacatcgttggatataac
aataagaagtgttggccgagagacgcgagaatgcggttgatgaagcacgacgtcaatcta
ggacgcgccgtgttctgggacatcaagaatcgtctacctagatctgtcaccaccattcag
tgggagaacagtttcgtcagcgtgtactctaaggataaccccaatctgttattcaatatg
tccggatttgaatgtaggattcttccaaagtgccgaacccaacacgaagaattcaaccac
cgcgacggcgtgtggaatttgcagcacgaaggcagcaaagagaggactgctcagtgtttc
ttgagggtggacgatgagtccatggggcgtttccacaatcgcgtgaggcagattctgatg
gcttccggatcaaccaccttcaccaagatcgtgaacaaatggaataccgctctgatcggt
ttgatgacctacttccgagaggccgtcgtgaacacccaagaactgcttgacctactggtg
aaatgcgagaacaaaattcagacccgtatcaagataggtctgaactcgaaaatgcccagt
cgtttcccccccgtggtcttctacactcccaaggaattgggagggctcgggatgctgtcc
atgggtcacgtcctcatccctcagtccgacttgcggtggtccaaacagacggacgtggga
atcacccatttccgatcaggtatgagccacgacgaagatcagctgatccccaatttgtac
cgttacatccaaccctgggaatccgaatttatcgactctcagagggtgtgggcggaatac
gccctcaagaggcaagaagcgaatgcccaaaataggaggttgaccctggaagatctggaa
gattcctgggacaggggtataccgagaattaacaccctcttccagaaggatcgtcacact
cttgcctacgacaaaggttggaggataagaacggaattcaaacaataccaggtactgaaa
caaaatcctttctggtggacgcatcaaaggcacgacggtaaactgtggaatctcaacaac
tacaggaccgacatgattcaggcgttgggaggtgtggagggaattcttgaacacactctt
ttcaaaggaacttatttccccacgtgggagggtcttttctgggaaaaggcgtccggtttc
gaggaatcgatgaaatacaaaaagctgaccaacgcccagaggtccggtctgaaccagata
cccaaccgtcgtttcactttgtggtggtcgcccacgatcaacagggccaacgtctacgtc
ggtttccaggtgcagctcgatcttaccggcatcttcatgcacggtaaaattcccaccttg
aagatctccctcatccagatattcagggctcacttgtggcagaaagtgcacgagtccatc
gtgatggatctgtgtcaggtgttcgatcaagaacttgacgctttagaaattgagactgta
caaaaagaaacgatccatcctaggaaatcgtataagatgaattcttcctgcgccgatatt
ttgctcttttcggcttacaaatggaacgtttctagaccgtctctgctcgcagacaccaaa
gatacgatggataatacgacaactcagaaatactggatcgatgtgcagctgaggtgggga
gactacgattctcacgacgtggaacgttacgccagagccaaatttttggactataccacg
gataatatgtccatatatccatccccgactggagtgctgattgctatagatttggcctat
aatttgcatagtgcttacggcaattggtacccaggatgcaaacctctcatccaacaagcc
atggccaagataatgaaggccaatccggccctctacgtcttacgagaacgtatcaggaaa
gccctgcagctgtactcgagcgaacccaccgaaccctacctctccagtcagaactacgga
gagctcttctccaaccagatcatctggttcgtggacgacaccaacgtgtaccgcgtcacc
atccacaagacgttcgagggaaacctgaccaccaaacccatcaacggcgccatcttcata
ttcaacccgaggaccggccagctgttcctgaagatcatccacacgtcggtgtgggccggc
cagaaacgtctgggacagttggccaagtggaagacggccgaagaagtagccgccttgatc
aggtcgctgccggtcgaggagcagcccaaacagatcatcgtcacgaggaagggaatgttg
gatccgttggaggtccatcttctcgattttcccaatatcgtgatcaagggttcggagctg
cagctgcccttccaggcctgtctcaagatcgagaagttcggggatctgatattgaaggcg
acggagcctcagatggtcctgttcaatctgtacgatgattggttgaagacgatatcgtct
tatactgctttctcgagactgattttgatactgagggctctccacgtcaacacggaaagg
accaaggttatattgaagccggacaagaccaccataacggagccgcatcatatatggccg
acgttgtcggacgatgagtggataaaggtggaggttcagctgaaggacttgatacttgca
gattacggaaagaagaacaacgtgaacgtggcctccctgacacaatccgaaatccgtgac
atcatcctgggtatggaaatcagcgccccctccgcccagcggcaacagatcgccgagatc
gagaagcagacgaaggaacagtctcaactcaccgccaccacgactagaacggtcaacaaa
cacggggacgagatcatcaccagcacgaccagcaattacgagacccagacgttcagttcc
aagaccgaatggagggtgagggcgatatcggccaccaacttgcacctcaggaccaaccac
atctacgtcagctcggacgacatcaaggagaccggatacacctacatccttcccaagaac
gtcctcaagaagttcgtcactatatccgatttgagggcgcagatttccgcgttcctctac
ggtgttagtccgccggacaacccgcaggtcaaggagctccgatgcctggtgctgccgccg
cagtggggcacccatcagacggtgcacatacccaacaccccgcccaaccatccgttcctc
aaggacatggagccgctgggttggatccacacgcagccgaacgagctgccgcagctctcg
ccccaggacataaccacccacgccaaactgatgggcgacaatcccaactgggacggggag
aagacgataatcatcacgtgttccttcacgcccgggtcctgttcgctcactgcttataaa
ctgacgccttctggttacgaatggggtaggcagaacacggataaggggaacaaccccaag
ggatacctgcccagtcactacgagaaggtgcagatgctgttgtccgacaggttcctggga
ttcttcatggttccgtctcagggatcgtggaattataatttcatgggtgttcgtcacgat
cctagcatgaagtacgagctgcagttggcgaacccgaaggagttttaccacgaggtccat
aggcccgcccatttcctcaatttctcatctttggaggacggtgatggttccggtgcggat
agggaggatgcgttcgcgtaa
DBGET
integrated database retrieval system
