Coccinella septempunctata (seven-spotted ladybird): 123320695
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Entry
123320695 CDS
T07873
Name
(RefSeq) uncharacterized protein LOC123320695 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123320695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cset03000
]
123320695
03019 Messenger RNA biogenesis [BR:
cset03019
]
123320695
04121 Ubiquitin system [BR:
cset04121
]
123320695
Enzymes [BR:
cset01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123320695
Transcription factors [BR:
cset03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
123320695
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123320695
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123320695
Ubiquitin system [BR:
cset04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123320695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Nup35_RRM_2
Baculo_IE-1
zf-UDP
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
123320695
NCBI-ProteinID:
XP_044764020
LinkDB
All DBs
Position
9:19041912..19048385
Genome browser
AA seq
1036 aa
AA seq
DB search
MILPKFPDQFCRFRSLLMNFAKYSKVNMSVLNQSGEEQVECPLCMEALEVDDLNFFPCTC
GYQICRFCWHRIRTDENGLCPACRKAYSEDPADFIPLSKEQVAKLKADKRHRDQQRKAKL
SENRKHLASVRVVQRNLVFVVGLPVRLADPELLKKHEYFGKFGKIHKVVINQSTSYAGSQ
GPSASAYVTYMKSDDALRAIQSVNNIMIDGRMLKSSLGTTKYCSHFMKNQPCPKADCMYL
HDFGDPEASFTKEQMHAGKHQEYEKKLHDAFTSRQSTTSPPSNIGQCDKLSSCSSSPPSS
QQHEGFPKSEPISTIGSKGKDGLAHSSGSSSKDSWPQLSLEKGEKTTEAKKTDQSKDKSK
SNKAKSKNCPGSPSSAQASATENATSSCSGLFSDNITVKLENKGHDRENFDMEDHNKNEI
NGKLDLEQISNIGEIHNKQIQRDNLEKFKNGVEGQSIFGLGDSKLGLTSDNSSFFSQGFQ
TVNHTLNGLTSSTEEDPHQDHSARENDLNTPTGGLSDTFPSLNTSEDWVFGFENDHLEEL
ATQATRTRQAAVPPKDSLDTLVNGISTSGNILGNIHQNVPSQNGPGGALLTGYGASKFFD
DFESSRRYLDGSKLHENTIMDSLIINNSSKTNGFVNTQHFGGLTNKEVLQKGTNGLNGLD
HNMSKFFMDFHKNQTQLNMLNGINSLITPPTQQQNGYYQQQQTAVQEHLLLLQQKQLEEQ
LRTLNIKQQQNYQYQNGFYGGREMNSSSPLPFGGRHVYNNMPVQGQTQGLGQVQPQPISI
AVGQGQNKIRNPEDELDFDPFQETQKGLAELIATEKSQTQGRPHMTTQGVHMNGLIHSQS
NPGLGHMPPPPPGFVQPQNSTHMNSFGSKILPFLNMSNNPQSLNSPTHNWPNGYVNPQKN
ISTNVNDWKNLDPAILSSSRHFPLANITAPPIREHSTYQNLTQQSLNGLANLNPQTSPTT
QTQNVRPHSYMNGSTDFSTANIFSNFTQQLQQPNLNGFTTTHTNQLNNWFTNEAFSNTNI
TSPPGFRNSQSKQQEC
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgattttacccaaatttccagatcagttctgtcgatttcgaagtttattgatgaatttt
gcgaaatattcaaaggtaaacatgtctgtactcaatcaaagtggtgaagagcaggtggaa
tgcccgctttgtatggaagcactagaagttgatgatctgaattttttcccttgtacttgt
ggatatcagatatgtaggttctgttggcataggattagaaccgatgaaaatgggttatgt
ccagcttgccgcaaggcctatagtgaagatccagctgatttcattcccttatccaaggag
caagtggcgaaattgaaagctgataaaagacatagggaccaacagaggaaagcaaaattg
agtgaaaatagaaaacatttggctagtgttagggttgtccaacgtaatttagtgtttgtg
gtgggtttaccagtacgtttggcagatcctgaactcctaaaaaaacatgagtattttgga
aagtttggtaaaatccataaggtggttataaatcagtctacttcctatgcaggatcgcag
ggacccagtgcaagtgcttatgtgacgtatatgaaaagtgatgatgctttacgcgctatc
caaagtgttaataatatcatgatagacggcagaatgcttaagtcaagtttaggtaccacc
aagtattgctcccattttatgaagaatcaaccttgccccaaggccgattgcatgtacctt
catgatttcggagatcccgaggccagtttcactaaggagcagatgcacgctggtaaacat
caggagtacgagaagaaattacacgacgcgttcacctcacgtcaaagtactacctcgccc
ccaagcaacatcggtcaatgcgacaagttgtccagctgtagttccagtcccccgtcttcg
caacaacacgaaggcttccccaaatcggaaccaattagtacgattggttctaaggggaag
gacggtttggcacattcaagtggaagttccagcaaggatagttggccccagttaagttta
gaaaaaggcgaaaaaacaacagaagcgaaaaaaacagatcaatctaaggacaaatcgaaa
tccaacaaggccaaatcgaaaaattgccccggttccccatccagtgcgcaggccagtgca
acagagaacgcgacttctagttgtagcggtctgtttagtgataatattacagtgaaatta
gagaataaaggacacgatagagaaaatttcgatatggaagatcacaataagaacgagata
aacggcaagttagatttggaacaaatttcgaacataggagaaatacacaataaacaaata
cagagggacaatttggaaaaattcaagaacggagtggagggacagagcatattcggattg
ggagattcaaaattaggattaaccagtgacaattccagtttctttagtcaaggttttcaa
accgtaaatcacacattaaacggtctgacttcgtctacggaagaggacccccatcaggat
cattccgccagggagaacgacctgaacacacccacgggcggtctgtcggacaccttcccc
tcgctaaacacatccgaggactgggtgttcggcttcgagaacgaccacttggaagagctg
gccacacaggcgaccaggaccaggcaggcggccgtgccgcccaaggattccctcgacacg
ttggtgaacggcatcagcacgtccggcaacatcttaggaaatatacaccagaacgtgccc
agtcagaacggccctgggggggcccttctgaccggttacggggctagcaaattcttcgac
gatttcgaatcatccaggaggtatcttgatggtagtaaattgcacgagaacacaatcatg
gacagtctgatcataaataattccagtaaaacaaacggtttcgtcaatacgcaacatttc
ggcggtctaacaaataaagaggtcctacagaagggtacgaacggtctgaacggtctagat
cacaacatgtcgaaattcttcatggacttccacaagaaccagacgcagttgaacatgctg
aacggcataaattccctgataaccccaccgacacaacaacagaacggctactatcagcaa
caacagacggcagtgcaggagcacctcctgttgctgcagcagaaacagctggaggaacag
ctgaggaccctgaacatcaaacagcaacagaactaccagtatcagaacggtttctacggc
ggcagggagatgaacagttccagtcccctgcccttcgggggtaggcacgtgtacaacaac
atgccggttcaggggcagacgcagggtctggggcaggtgcagccgcagcccatcagcata
gcggtgggacagggacagaacaagatcaggaatccggaggacgagctggactttgaccct
ttccaagagacacagaagggcttggcggagctcatagccacagagaaaagtcaaacacaa
ggaagaccacacatgaccacgcaaggcgttcacatgaacggtttgatacacagtcagtcg
aaccctggtctggggcacatgccgccaccaccaccgggtttcgtacagccccaaaattca
acacacatgaactcgtttggtagtaaaattttaccattcctaaatatgtcaaataatcca
cagtccttaaatagccccacacataactggcctaacggctatgtaaatccacagaaaaat
atatcgacaaatgtgaacgattggaagaatctagatccggcgatcctgagttccagtaga
catttcccactagcaaatataacggcgccacctatcagagaacacagcacctatcagaac
ctaacacaacagtccctaaacggtctggccaatctaaatccccaaacatcaccaacgaca
cagacacagaacgtcagaccacacagttacatgaacggaagcacagatttcagtacagcg
aacatattctccaacttcacacaacagctccaacagccaaatctaaacggtttcacgaca
acacacacgaaccaactgaacaattggttcacgaacgaggcattctcgaacacaaacata
acgagccccccaggtttcagaaattcacaaagtaaacagcaggaatgttga
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