Coccinella septempunctata (seven-spotted ladybird): 123321395
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Entry
123321395 CDS
T07873
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03015
mRNA surveillance pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123321395
09123 Folding, sorting and degradation
03018 RNA degradation
123321395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123321395
03041 Spliceosome [BR:
cset03041
]
123321395
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123321395
mRNA cycle factors
Stress granule specific factors
123321395
Spliceosome [BR:
cset03041
]
Complex C
Other components
Complex C specific factors
123321395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_10
RRM_RdRP1_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
123321395
NCBI-ProteinID:
XP_044764894
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All DBs
Position
X:11217915..11221148
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AA seq
626 aa
AA seq
DB search
MNAGAPNYPMASLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQ
QPGDAERALDTMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFS
AFGNILSCKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNEKKVYVGRFIPRKER
EKELGEKAKLFTNVYVKNFGEELTEEQLRQMFEQFGAITSYKIMSKDDGKSKGFGFVAFE
TPEAAEAAVETLNGKELVEGKLLYVGRAQKKAERQQELKRKFEALKLERLNRYQGVNLYV
KNLDDTIDDERLRKEFSPFGTITSAKVMMEEGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GTKPLYVALAQRKEDRKAHLTSQYMQRMANIRMHQIGPYMQPGAQSYFVPTMPAPPQRFY
GAAQVAPIRSSPRWPAQAQVRPGTQGAAAAYSNMQQNAYRAAARPPNQSAAMRNSISNMP
RPITGQQPPNIQGRPLGGQGVVAATANRPSTYKYTPNMRNPPQGLGMTNAAPVQQAVHIQ
GQEPLTATMLAGATPQEQKQMLGERLFPLIERMYSNLAGKITGMLLEIDNSELLHMLEHN
ESLKAKVEEAVAVLQAHQAKQQIKKE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgggtgcccccaattatcccatggcgtctctgtacgtcggggatctacatact
gatataactgaggctatgcttttcgagaaattctcgactgctggacccgttctatccatc
cgcgtttgcagggatttgataacccgtcgttctcttggctatgcctacgtgaattttcaa
caacctggtgatgctgaaagggctttggataccatgaattttgacttaataaaaggacgt
cccattaggattatgtggtcccaacgtgatccatctctgcgtaagtctggggttggaaat
gtgtttatcaagaatttggaccgttccattgataacaaggccatgtacgatactttctct
gctttcggtaatatacttagctgtaaagttgcccaagacgaaaatggcacgagcaaaggg
tatggctttgttcattttgagaccgaagaagctgccaacaagtcaattgagaaggtgaat
ggaatgttactgaacgagaagaaagtgtacgtcgggcgtttcatcccccgtaaagaaaga
gaaaaggaactaggagaaaaggctaagttattcactaacgtttacgtcaaaaatttcggt
gaagaattaaccgaggaacaactacgtcaaatgttcgagcaatttggggctataacaagt
tacaagattatgagcaaagatgatggaaagtctaagggatttggatttgttgcattcgag
acaccagaggctgctgaggcagctgtagaaactttgaatggtaaggaattagttgaagga
aaattactctacgttggaagggctcagaagaaagcagagcgtcagcaagagctcaagcga
aaattcgaagcgctgaagctcgagcgattaaaccggtatcaaggtgtgaatttgtatgtc
aagaaccttgacgacaccattgatgatgagcgattacgcaaagaattttcgccctttggt
actatcacttctgctaaggtgatgatggaggagggtagaagcaaaggtttcggctttgta
tgtttttcatcccccgaggaggcaaccaaggctgttacagagatgaatggtagaattgtg
ggtactaaaccgttatatgtggcacttgctcaaaggaaagaagatcgtaaagcacatctt
acatcacagtatatgcagcgaatggcaaatattcgtatgcatcaaatcgggccatacatg
caacccggagcccaaagctattttgttccaactatgccggctccgcctcaaagattttac
ggcgcagcacaagtggctccaataagaagcagtccaagatggccagctcaggcccaagta
agaccaggcactcagggcgccgctgcggcctattccaacatgcagcagaatgcctatagg
gcagctgcacgaccaccaaaccagtctgctgctatgcgtaacagcattagcaacatgcca
cgcccaattactggacaacaaccaccaaacatacaaggacgaccactcggaggacaaggt
gtcgtggcagccacagctaaccggccatcgacttacaagtacacacccaacatgcgtaat
ccacctcagggactcggaatgactaatgctgctcctgtgcagcaggccgtacacatacaa
ggtcaagaacccctcaccgccaccatgttggcaggagcaacaccacaggaacagaagcaa
atgctaggtgaacgtctgttcccgcttatcgaacgcatgtactctaatctggcgggtaaa
attaccggtatgttgttggaaatcgacaactctgagttgttgcacatgttggaacataat
gagtctctcaaggcgaaagtggaagaagctgttgctgtcttacaggctcatcaagccaaa
cagcaaatcaaaaaagagtaa
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