Coccinella septempunctata (seven-spotted ladybird): 123323000
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Entry
123323000 CDS
T07873
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123323000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123323000
03009 Ribosome biogenesis [BR:
cset03009
]
123323000
Enzymes [BR:
cset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123323000
Spliceosome [BR:
cset03041
]
Complex A
U1 snRNP components
U1 related factors
123323000
Complex B
123323000
Ribosome biogenesis [BR:
cset03009
]
Eukaryotic type
Pre-60S particles
Helicases
123323000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123323000
NCBI-ProteinID:
XP_044767100
LinkDB
All DBs
Position
1:63174018..63184107
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AA seq
760 aa
AA seq
DB search
MRGRPGRRSRSRDRGRRSRSRDRPFRGEMRGGRRNQAGASLRKPRWDLSRLEPFKKDFYT
PHSNVINRSIDEVEEWRRQKEISLKGRDIPSPVLTFEEVYFPECVMSGIKKMGFKVPTAI
QAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHISNQPRLQRNDGPIVLVLAPTRELA
QQIQQVANDFGHTSKIRNTCIFGGAPKGPQANDLMDGVEIVIATPGRLIDFLESNRTNLR
RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVQALASEFLKDYIQI
NVGSLQLSANHNILQIIDVCQEYEKEGKLSTLLKEIMAEKENKTIIFIETKRRVDEITRK
MRRDGWPAVCIHGDKSQQERDWVLQDFRSGKAPVLVATDVAARGLDVEDVKFVINFDYPS
NSEDYVHRIGRTGRSQKTGTAYTFFTPSNSNKAADLVAVLKEAKQVINPKLLEMADKCWN
GNGNGRGMGGRKPWGRGRGGGRGRSRSRSPVRSRSRSPRRNARRERSRSRDRSRSRDRSR
SRDRRRRHSPSYSPSPQRSTILSKEKSPPKPLMSLMNKPPPNISSVPPPQPLSLPSTRVP
PPQGPPAQTRMPPQGPPRSSLMQGHLPPGQNQVASLQARPPHPPLPTHSTMPPMNTQVPP
PQTRGPPPPQTQLPPPRVPPPMIQAPPIHQAPPPPPPSTSQVQQPAHPPKPMMSYQSLPP
AGYGGYPFPNGALIFNSPPPPPPSQGVNMYFPYAPPPPTR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgagagggcggccagggagacgttcaaggagtcgtgatagaggtcgaagatctaggagt
agagatagacctttccggggagagatgagaggtggtaggagaaaccaagctggggctagt
ttaagaaagcctagatgggatttgagccgattggaacccttcaaaaaagatttttacacc
ccacattcaaatgtaatcaatcggtctatagatgaggtggaagaatggaggaggcaaaag
gaaatatccttgaaaggaagggatattccatctccagttcttacatttgaggaagtatat
tttccagaatgtgtcatgtcgggtataaagaaaatgggattcaaggttcctacagcgatt
caagctcaaggatggccaattgctttatctggcagagatatggttggtatagcatccacg
ggatctggtaaaacactttcgtatatcctacctgccatagttcatatcagtaaccagcct
cgcctgcaaaggaatgatggtcctattgtgttagttctcgctcctaccagagaattagct
caacaaattcaacaggtagcaaatgattttggtcatacgtccaaaatccgaaatacttgt
atattcggtggagcccctaaaggtcctcaagcaaatgatctaatggatggtgtagagata
gtaatcgctacacctggtcgtcttattgattttctcgagagtaatcgcacaaatctgcgc
aggtgtacgtatttagtgttagatgaggccgatcgtatgttggacatggggttcgaacct
caaataagaaaaataatagaacagataagacccgatcggcagactctcatgtggtcggct
acttggccgaaagaagtccaagccctggcttccgaattcttgaaagattatattcagata
aacgtgggatccctgcagctgtcagctaatcataacattctccaaatcatcgacgtctgt
caggaatacgagaaagaaggaaaattgagcaccttgctgaaggaaataatggccgagaaa
gaaaataaaacgattattttcattgagactaaaaggagagttgatgagataactagaaaa
atgaggagggatggatggccagctgtgtgtatacatggggataaatcgcaacaagaaagg
gattgggtgttacaagattttagatctggaaaagccccagttctggtagcaacagatgtg
gcagcacgtggtttagatgtcgaagacgttaaattcgttataaacttcgattacccgtcc
aattccgaagactacgtgcatcgtatcggtagaacggggaggtcgcaaaagaccggtacg
gcctacaccttcttcacgccgagcaactccaacaaggctgccgatcttgtggccgtgctc
aaggaggcgaaacaggtgatcaaccccaaactgctggagatggccgacaagtgttggaac
ggcaacggaaacggaagaggtatgggaggaaggaaaccgtggggtcgaggtaggggagga
ggtcgtggcagatcgcgttctcgctcccccgtcagatcccgatccagatctcctcgccga
aacgccagaagagaacgaagtcggtccagagatagaagcaggtctcgcgatcgaagtcgt
tccagggacagaagaaggagacactcacccagttactcgccctcccctcaacgctccacg
atactgtcgaaggagaaaagtcccccaaaaccgttgatgtcactgatgaacaaaccccct
ccgaacatctcatcggtacctccgccacagccgctctcgcttccgtccaccagggttccc
ccgccccaaggaccgcctgcgcagacgaggatgccccctcaaggacccccgaggagcagc
ttgatgcagggtcatctgccgccgggccaaaatcaagtggcttcgttgcaggccagaccg
ccgcacccacctctacccacgcattcgacgatgccaccgatgaacacgcaagttccgccg
ccgcagacgcgggggccgccaccaccgcaaacgcagctaccccctcctagagttcctccg
cccatgattcaggctccgcccattcatcaagctccgcccccaccgccaccgtcgacttct
caagttcaacaaccagctcatccccccaaaccgatgatgtcttatcagtcgttacccccg
gctggttatggtggatatccgtttccgaatggagccttaattttcaattcaccaccccct
ccgcccccgagtcaaggggtgaacatgtattttccctatgcacccccgcctccaacaaga
taa
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