Campylobacter subantarcticus LMG 24377: CSUB8523_0120
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Entry
CSUB8523_0120 CDS
T03572
Symbol
ispA
Name
(GenBank) geranyl diphosphate synthase / farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csf
Campylobacter subantarcticus LMG 24377
Pathway
csf00900
Terpenoid backbone biosynthesis
csf01100
Metabolic pathways
csf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CSUB8523_0120 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csf01006
]
CSUB8523_0120 (ispA)
Enzymes [BR:
csf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CSUB8523_0120 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CSUB8523_0120 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
CSUB8523_0120 (ispA)
Prenyltransferases [BR:
csf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CSUB8523_0120 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
NOG1_N
Motif
Other DBs
NCBI-ProteinID:
AJC91693
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All DBs
Position
102119..102967
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AA seq
282 aa
AA seq
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MILQKFKQHLEQNFPKAEGFHPFFNEALKWMLEAGGKHFRAQLLLGIVNVKNSTLLDKAL
NAALALEFIHTYSLIHDDLPAMDNASLRRGKQTLHKKYDETTAILVGDALNTEAFLLLSR
LDLKESVKIKLIESLAFNAGLGGMIIGQAIDCYFEDQLLNLEQVEFLHIHKTARLIAAAL
KMGCEICELDEKECEQIYEIGLLIGLVFQIKDDIIDATLDTQEAGKPTHNDLHKNSFVKL
LGLEGAKKAKDDKIALCEEKMKNLDSKLANELQILIDKYLKG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgattttgcaaaaattcaaacaacatttagagcaaaactttcccaaagcagagggtttt
catccttttttcaatgaggctttaaaatggatgctagaagctggtggaaagcattttaga
gcccaacttcttttgggtatagttaatgtaaaaaattctactttgcttgataaagcttta
aatgctgccttggctttggaatttatccatacttactctttaatacatgatgatttacct
gctatggataatgcttctttgcgtagaggaaaacaaactttacacaaaaaatatgatgaa
accactgctattttagtgggtgatgctttgaatactgaagcttttttactgctttcaagg
cttgacttaaaagaaagtgtaaaaataaaacttatagaaagcttagcttttaatgctggg
cttggtggtatgatcatcggtcaggcgattgattgttattttgaagatcagctgctaaat
ttagaacaagttgagtttttgcatattcataaaactgcaagattaatcgcagcggcttta
aaaatgggttgtgaaatttgtgagttagatgaaaaagaatgcgagcaaatttatgaaata
ggacttttgatagggttagtttttcaaattaaagatgacattatcgatgcgactttagat
actcaagaagcaggtaagccaactcataatgacttgcacaaaaattcttttgtgaaactt
ttgggtttagagggtgctaaaaaggcaaaagatgataaaattgcattatgcgaagaaaaa
atgaaaaatttagattctaagcttgctaatgagcttcaaattttgattgataaatattta
aagggttaa
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