Campylobacter subantarcticus LMG 24377: CSUB8523_0424
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Entry
CSUB8523_0424 CDS
T03572
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
csf
Campylobacter subantarcticus LMG 24377
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csf03016
]
CSUB8523_0424 (truD)
Enzymes [BR:
csf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CSUB8523_0424 (truD)
Transfer RNA biogenesis [BR:
csf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CSUB8523_0424 (truD)
Prokaryotic type
CSUB8523_0424 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF2732
FtsX_ECD
Motif
Other DBs
NCBI-ProteinID:
AJC91983
LinkDB
All DBs
Position
394673..395797
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AA seq
374 aa
AA seq
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MEKNIIFKPLYTLKHSPINVYFSKNSNDFVVRERSLYEFSGKGEHLILHIQKKDLSTSEA
LRILSEHSGVKMKDFGYSGLKDKQGLTFQYISMPKKYEESLKNFKHDKMKILESFYHDNK
LRIGHLKGNSFFIRLKKVSKVDTLKIEQAFKNIQEQGFANYFGYQRFGKFQDNFLQGLEI
LKGKKIKNKKMQEFLISAFQSELFNRYLSKRVELSHFINDFCEKEIKQIYGLEKEEIKSL
KNQKQFFKLLKGEVLGHYPFGKCFVCEDLSSEVERFNQKDISAMGLLMGSKAYEVNGGLA
KKLEDEIFSFVYEFKDKMQGSRRFMWSYLQDCKSHYDEEKAHFTLEFFLQKGSYATVVLE
EILHTDIFEQNHNI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaacatcatttttaaacccttgtatactttaaaacatagtccaataaatgta
tatttttcaaaaaatagcaatgattttgtagtaagagaaaggtctttgtatgaatttagt
ggaaaaggtgagcatttaattttacatatacaaaaaaaagatcttagtactagtgaagct
ttgagaattttaagtgagcatagtggtgttaaaatgaaagattttggttatagtggtcta
aaagacaagcaaggcttgacttttcaatacatttctatgcccaaaaaatacgaagagagt
ttgaaaaattttaaacatgataaaatgaaaattttagaaagtttttatcatgataataaa
cttagaataggacatttaaaaggtaattcattttttataagattaaaaaaagtttcaaaa
gtagatactttaaaaatagaacaagcttttaaaaatatccaagaacaaggttttgctaat
tattttggataccaacgttttggtaaatttcaagataattttttacaaggattagaaatt
ttaaaaggcaaaaaaattaaaaataaaaaaatgcaagaatttttaatttctgcttttcaa
agtgagctttttaatagatatttgagtaaaagggtggaattatcacattttattaatgat
ttttgtgaaaaagaaataaagcaaatttatggtttagaaaaagaagaaatcaaaagttta
aaaaatcaaaagcagttttttaagcttttaaaaggtgaagttttaggacactatcctttt
ggcaagtgttttgtatgtgaagatttgtcaagtgaagtagaaagatttaatcaaaaagat
attagtgccatgggacttttaatgggctctaaagcttatgaagtaaatggaggcctagct
aaaaaattagaagatgagattttttcttttgtatatgagtttaaagataaaatgcaaggt
tcaagacgctttatgtggtcttatttgcaagattgtaaaagtcattatgatgaagaaaaa
gctcattttactttggaatttttcttacaaaaaggatcgtatgctacggtagttttagaa
gaaattttacatacagatatcttcgaacaaaaccataatatataa
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