Campylobacter subantarcticus LMG 24377: CSUB8523_0492
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Entry
CSUB8523_0492 CDS
T03572
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
csf
Campylobacter subantarcticus LMG 24377
Pathway
csf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSUB8523_0492 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csf03021
]
CSUB8523_0492 (rho)
03019 Messenger RNA biogenesis [BR:
csf03019
]
CSUB8523_0492 (rho)
Transcription machinery [BR:
csf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CSUB8523_0492 (rho)
Messenger RNA biogenesis [BR:
csf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CSUB8523_0492 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Mor
OB_RNB
Spore_III_AA
ATPase_2
AAA
AAA_22
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AJC92039
LinkDB
All DBs
Position
complement(464944..466245)
Genome browser
AA seq
433 aa
AA seq
DB search
MENTKEKKHQRTHIPVEGYKIEDLKLLDLESLVKIANEAEIENPREFRRQDLIFEILKAQ
TKKGGFILFTGILEISPDGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQVR
EPKDQEKYYALLKIEAINYLPLKEARERPLFDNLTPIFPTEKIKLEYDPLKLTGRMLDLF
APIGKGQRSLIVAPPRTGKTELMKELATAIAKNHPEAHLIVLLVDERPEEVTDMQRCVKG
EVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVVILLDSITRLARAYNTATPSSGKVL
SGGVDANALHKPKRFFGAARNIEHGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVL
DRNISDRRIYPAINIIKSGTRKEELLQGVEKLQKIWAIRSAISQMDDIEALKFLYSKMLK
TKSNEELLSIMNE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatactaaagaaaaaaaacaccaaagaacacacattccagtggaaggttataaa
attgaagatttgaagttacttgacttagaaagcttagttaaaattgccaatgaagcagaa
atagaaaatccaagagaatttagaagacaagatcttatttttgaaattttaaaagcacaa
actaaaaagggtggctttatacttttcaccggaattttagaaatttcaccagatggctat
ggattcttacgcggaatggattctaatttaagtgatagcgtaaacgatgcgtatgtatca
aactcgcaaattagaaaatttgccttacgtgtaggagatattgttacaggtcaagttaga
gaacctaaagatcaagaaaaatactacgctttattaaaaatcgaagcaattaactacctt
cctttaaaagaagccagagaaagacccttatttgataatcttactccgatttttccaacc
gagaaaatcaaattagaatatgatcctttaaaactcactggtagaatgcttgacttattt
gcccctataggaaaaggtcaaagaagcttgattgtagcacctccaagaaccggtaaaacc
gagctaatgaaagaactagcaactgccattgctaaaaaccatcctgaagctcacttaatc
gtacttttagtagatgagcgtcctgaagaagttacagacatgcaaagatgtgttaaaggt
gaagtttttagctctactttcgacctacctgcttataatcatgttcgcgtagcagaactt
gtaatagaaaaagcaaaaaggatggtagaaacaggtaaagatgtggttatattgcttgat
tccattacaagattagcaagagcttacaacaccgccacaccaagtagcggtaaagtttta
agtggtggggttgatgcaaatgcactacataaaccaaaacgcttttttggtgcagctaga
aatatagaacatggaggctcactaaccatcatagcaactgctttgatagaaactggatca
agaatggatgaagttatttttgaagaatttaaaggtacaggaaatagtgaaatcgttctt
gatagaaatatttcagatagaagaatttatcctgcaattaacattataaaatctggtact
agaaaagaagaattgctccaaggtgtcgaaaaactgcaaaaaatttgggcgattagatca
gctatatctcaaatggatgatattgaagcattaaaatttttatactcaaaaatgctcaaa
actaaaagcaatgaagaattgctctctattatgaatgagtaa
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