Campylobacter subantarcticus LMG 24377: CSUB8523_0578
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Entry
CSUB8523_0578 CDS
T03572
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csf
Campylobacter subantarcticus LMG 24377
Pathway
csf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSUB8523_0578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csf03400
]
CSUB8523_0578
Enzymes [BR:
csf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CSUB8523_0578
DNA repair and recombination proteins [BR:
csf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSUB8523_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
IDEAL
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJC92111
LinkDB
All DBs
Position
545194..545805
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AA seq
203 aa
AA seq
DB search
MNKRNLCYLKAFGYEYFNEQKQIRHFNLSFKELNERVKTCNLCHFSKLRKHSLMEKEAKN
AKILIYQAFIDKEENESGKFFASKNKQEFLRLCKELLNLKEDEIYFSYMFKCFSNFKIDD
QALKLCLPYFYNELDFVKAKIILCLGQEAFVSLGFENFQKYKGQCMRFNNALLLPSYDLN
FLSKNPSFYTEFIEDIKKIKGYL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcgtaatttgtgttatttaaaagcttttggttatgaatattttaacgagcaa
aaacaaattagacattttaacttaagctttaaagaattaaacgaaagagtgaaaacttgc
aatctttgtcatttttctaaattaagaaagcatagtttaatggaaaaagaagccaaaaat
gctaaaattttgatttatcaagcttttatcgataaagaagaaaatgaaagtggaaagttt
tttgcttctaaaaataagcaagagtttttaagattatgcaaagagcttttaaatttaaaa
gaagatgagatatatttttcttatatgtttaaatgttttagtaattttaaaatagatgat
caagcactaaaattatgcttaccatatttttataacgagcttgattttgtaaaagcaaag
attattttatgtcttggtcaagaagcttttgtaagtttgggttttgagaactttcaaaaa
tacaaagggcaatgtatgcgttttaataatgctttgcttttgccaagttatgatttgaat
tttttgagtaaaaatcctagcttttatactgaatttatagaagatattaaaaaaataaaa
ggttatttatga
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