Campylobacter subantarcticus LMG 24377: CSUB8523_1241
Help
Entry
CSUB8523_1241 CDS
T03572
Symbol
trmA
Name
(GenBank) tRNA m5U54 methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
csf
Campylobacter subantarcticus LMG 24377
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csf03016
]
CSUB8523_1241 (trmA)
Enzymes [BR:
csf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CSUB8523_1241 (trmA)
Transfer RNA biogenesis [BR:
csf03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CSUB8523_1241 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
MTS
RrnaAD
DREV
Methyltransf_23
Methyltransf_4
Methyltransf_11
Methyltransf_12
DUF900
Motif
Other DBs
NCBI-ProteinID:
AJC92747
LinkDB
All DBs
Position
complement(1199806..1200858)
Genome browser
AA seq
350 aa
AA seq
DB search
MHFEEKIALNKALFSSLYDGEIQCFKSPLKAYRTRAEFSIYHHENGEISYAMFKNKKKTP
IEKFDIADEKIQEYMPILLNNLNENLKHKLFGVEFLATKLDLSATLLYHKNIETIIHDLQ
ELSTRLNLKLIARSRGKKLVFNGENLRQILNINTNEFLYEFNNDCFIQPNTTINEKMIEW
VVDLLEKEDRKDLLELYCGYGNFTIVLAKYFNKILATEISKKNIEFALKNCTLNSIGNIS
FTRLSSEELSQALKKEREFNRLKGINLDSFSISHVLVDPPRAGLDLSVIELIKNYENIIY
ISCNPISLRENLKKLCKTHKISKFAFFDQFANTNHLECGIYLKLNNNIKH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgaagaaaaaattgctttaaacaaagcattgttttcttctttatatgatgga
gaaattcagtgctttaaatcacctttaaaagcttatagaactagggcagagttttctata
tatcatcatgaaaatggagaaatttcttatgcaatgtttaaaaataagaaaaaaactcct
attgagaaatttgatatagcggatgaaaaaattcaagaatatatgcctattttattaaat
aatctaaatgaaaatttaaaacataaactttttggagtggaatttttagcgactaagttg
gatttaagtgcaaccttgctttatcataaaaatatcgaaaccatcatacatgatctacaa
gaattatctacaagattaaaccttaagctcatagcaagaagtaggggtaaaaagcttgta
tttaatggagaaaatttaagacaaattttaaacatcaatacaaatgaatttttatacgag
tttaataatgattgttttatacagccaaatacaactataaatgaaaaaatgattgaatgg
gtggttgatttattagaaaaagaagatagaaaagatttattagaactttattgtggttat
ggaaattttactatagtattggcaaagtattttaataagattttagcaactgaaatttct
aaaaaaaatatcgaatttgctctaaaaaattgcactttaaattctattggaaatatatct
tttacaagactttctagcgaagaattaagtcaagccttaaaaaaggaaagagaatttaat
cgtttaaaaggtataaatttagatagttttagtatatctcatgttttagttgatccacca
agagcaggacttgatttaagtgtgattgagcttattaaaaattatgaaaatatcatttat
atttcatgtaatcctattagtttaagagaaaatcttaagaaattatgtaaaactcacaaa
atatctaaatttgcattttttgatcaatttgcaaatacaaatcatcttgaatgtggtatt
tatttgaaattaaataacaatataaaacattaa
DBGET
integrated database retrieval system
