Cylindrospermum stagnale: Cylst_0221
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Entry
Cylst_0221 CDS
T02398
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csg03009
]
Cylst_0221
Enzymes [BR:
csg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Cylst_0221
Ribosome biogenesis [BR:
csg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cylst_0221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
MTS
PrmA
Methyltransf_15
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_11
DOT1
Methyltransf_12
Methyltransf_32
TPMT
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AFZ22596
UniProt:
K9WS57
LinkDB
All DBs
Position
233793..235175
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AA seq
460 aa
AA seq
DB search
MTNIVWRQGELIEVAISDLSDTGDGVGRFENRVVFVPDTVPGDRVIVRLVNVKPQYANST
LQQILQPSPHRIRPGCIVADKCGGCQWQHIDYQYQLIAKRNQVIQALERIGGFVQPPVDL
VLVAASPLGYRNKATYPFGISATGQVQAGYYQKSSHQLINLNQCPVQDARLNPILAEVKQ
DIQRQGWSIYDERRHQGQIRHLGLRIGRGTGEILLTLVVKDWNLPGIEAVAIEWLKRYPH
LVGVSLNRNGDRTNAIFGSETRCVAGVPGLREKFAHLEFLVRPDTFFQVSTETTEALLQV
IQSQLNLQGHEVLVDAYCGIGTLTLPLAKQVRHATGLEVQPAAVEQAILNAQHNGIENVT
FQVGAVEKILPNLGIIPDVVLLDPPRKGCDRAVIETLRKLKPSQIVYVSCKVATLARDLK
ILCGEGLYAITRVQPADFFPQTSHVEAAAFLALSPNHKGA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgactaatatagtttggcgacagggtgaattaatcgaagtggcgatttctgatttgagt
gacactggtgatggagtgggtcgctttgagaatcgcgtagtatttgtcccggatacggta
ccaggcgatcgcgttattgtccgactggtaaatgtcaaaccgcaatatgccaacagcacg
ctccagcaaatattgcaaccatcccctcatcgtatccgacccggttgtattgtggctgat
aaatgtggtggttgccagtggcagcatattgattatcagtaccagctaatagccaagcgt
aatcaagtgatccaagctttggaacgcattggtggttttgttcaaccgccagtagatcta
gtgctggtggctgcttcaccgctgggctatcgaaataaagctacctatccttttggcatc
tccgctacgggtcaggtacaagctggttactaccaaaaaagtagtcaccaattaattaac
ttgaatcaatgcccagtacaagatgctcgcttaaatcccatacttgccgaagttaagcag
gatatccaacggcaaggttggtcaatttacgacgaacgacgtcaccaagggcaaattcgc
catctcggtttacgcattggccggggtacaggtgaaattttgctgacgttagtggtcaag
gactggaatttaccggggattgaagccgtagcaattgagtggttaaaacgctatccccat
ttggtgggagtttcactgaatcggaatggcgatcgcacaaatgccatttttggcagcgaa
actcgttgcgttgctggagttcccggactgcgggaaaaattcgctcacctggaatttctt
gtccgcccagatacatttttccaggtttctacagaaacgacagaggcactattgcaagta
attcagtcacaactgaatcttcaagggcatgaggtgctagtcgatgcctactgcggcatt
ggcactttaactttgcctctggctaaacaagtacgtcatgctacgggtttggaagtacaa
ccagcagcggtggaacaggcaattctcaatgctcaacataatggcattgaaaatgtgaca
ttccaagtcggggctgtggagaaaattctcccaaatctgggcattataccagatgtggta
ttacttgatccgccacgcaagggatgcgatcgcgctgtaattgaaactttacgaaaattg
aaaccatctcagatagtttacgtcagttgtaaagtagccacccttgcccgtgacctcaaa
atcctttgtggagagggactgtacgctattacacgggtacaacccgctgatttttttccc
caaacgtcccatgtcgaagctgctgcctttctggcgctatcaccgaaccacaagggggct
taa
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