Cylindrospermum stagnale: Cylst_0478
Help
Entry
Cylst_0478 CDS
T02398
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csg03400
]
Cylst_0478
Enzymes [BR:
csg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Cylst_0478
DNA repair and recombination proteins [BR:
csg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Cylst_0478
Prokaryotic type
Cylst_0478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFZ22820
UniProt:
K9WQZ8
LinkDB
All DBs
Position
complement(514642..516084)
Genome browser
AA seq
480 aa
AA seq
DB search
MSDLILFWHRRDLRIADNTGLAAAQRQSPKVVGVFCLDPDILERDDIAPARVTYMLGCLQ
ALQERYIQAGSQLLILHGPPVVVIADLAEALKAKAVFWNWDVEPYSQKRDRTIINSLTEK
GIQFLNQNWDQILHSPEEIFSGAKTPYTVYTPFWKNWSSKPKAKPVETLENAEGLTADEQ
EIAKLAGAIELPSAKDLGFVWEGELVISPGEAAAQARLEAFTNNAITEYQEQRNFPAVDG
TSQLSAALKFGVIGIRTVWQATIEALENSRSGETEASIRTWQQELAWREFYQHAMYHFPE
LAEGAYRETFKNFPWENNQEHFQAWCEGRTGFPIVDAAMRQLNEIGWMHNRCRMIVASFL
TKDLQINPQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPDG
EYIRQWVSELRSVDTQYLVTGKIPPLELHAVGYPKPIVDHKTQQALFKEIYQQQKGVNLP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttaattctgttttggcatcgccgcgatttacgcattgctgacaatacggga
ctagctgcggcacaacggcagagtccaaaagtggtaggtgtgttttgccttgatcctgat
attctggagcgggatgatatcgcaccagcgagagtaacttatatgctggggtgtttgcag
gcgctacaagagcgatatattcaagctggtagtcagttgttaattctgcatgggccgccg
gtggtagtgattgcagatttagctgaggcattgaaagctaaggctgtgttttggaattgg
gatgtggaaccgtactcgcaaaaacgcgatcgcactataattaattctctaacggaaaaa
ggcattcagtttcttaaccaaaattgggatcagatcctccactctccagaagaaattttt
agcggtgctaaaactccttacacggtttatactcccttctggaaaaattggagcagtaaa
ccgaaggcaaaaccagtagaaacactggaaaatgctgagggattaacggcagatgaacag
gaaattgccaagcttgcaggagcaattgaattaccctccgccaaagatttaggatttgtc
tgggagggagaattggtgatttctcctggagaggcggcggcgcaagcacgtttagaggct
tttaccaataatgccattactgaataccaagaacagcgcaattttccagcagtagatggc
acatcacaactgagtgcagctttaaaatttggcgttattggcattcgcaccgtttggcaa
gccacaatagaggcattagaaaacagccgcagtggagaaacagaagccagtatccgcaca
tggcaacaggaattagcttggcgggaattttatcaacacgcaatgtatcacttcccggaa
ctagctgaaggtgcttatcgggaaacctttaaaaacttcccttgggaaaataaccaagaa
cattttcaagcttggtgcgaaggtagaaccggctttcccatcgttgatgcagccatgcgc
cagttaaatgaaatcggctggatgcataatcgttgtcgaatgattgtcgccagtttcctc
accaaagacttgcagataaatccccaatggggagaaaaatattttatgcagaagttaatt
gacggtgatttatctgctaataatggcggctggcaatggagtgcttccagtggcatggac
cccaaaccattgcgaatttttaacccagccagtcaagcgcaaaagttcgatccagatggg
gaatatatccgccaatgggtctcagaactgcggtctgtagatacacaatatttagtaact
ggtaaaattccccctttagaacttcatgctgttggttatcctaaacccattgtggatcat
aaaacacagcaagctttgtttaaggaaatttatcaacagcaaaagggtgtaaatttgccc
tga
DBGET
integrated database retrieval system
