Cylindrospermum stagnale: Cylst_0518
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Entry
Cylst_0518 CDS
T02398
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csg
Cylindrospermum stagnale
Pathway
csg03030
DNA replication
csg03430
Mismatch repair
csg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cylst_0518
03430 Mismatch repair
Cylst_0518
03440 Homologous recombination
Cylst_0518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csg03032
]
Cylst_0518
03400 DNA repair and recombination proteins [BR:
csg03400
]
Cylst_0518
Enzymes [BR:
csg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cylst_0518
DNA replication proteins [BR:
csg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cylst_0518
DNA repair and recombination proteins [BR:
csg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cylst_0518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AFZ22857
UniProt:
K9WTH9
LinkDB
All DBs
Position
complement(573443..576073)
Genome browser
AA seq
876 aa
AA seq
DB search
MSFVPLHIHSDYSLLDGASQLPELVDQAIALGMKAIALTDHGVMYGAVELIKICRSKNIK
PIIGNEMYIINGDIEKQERRPKYHQVVLAKNTKGYKNLVKITTISHLQGVQGKGIFSRPC
INKDLLKQYHEGLIVTSACLGGEIPQAILSNRPDAARKVAQWYKDVFGEDYYLEIQDHGS
QEDRIVNVEIVKIARELGIKIIATNDSHYISCFDVEAHDALLCIQTGKLIIEDKRMRYSG
TEYLKSADEMKALFRDHLPDDIIAEAIATTEEVADKVEPYHIMGEPQIPTPPIPSGHTAD
TYAEEVAWLGLLDRLNRKSRNEVDSTYKERLEYELKMIQQMGFSKYFLVVWDYIKFARDN
NIPVGPGRGSAAGSLVAYAMKITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEQRDKV
IDYVTDKYGADRVAQIITFNRLTSKAVLKDVARVLDIPYGEADKMAKMIPVVRGKPTKLK
VMISDATPEQEFKNKYDNDPKVRHWLDMAMRIEGTNKTFGVHAAGVVISADPLDEIVPLQ
RNNDGSVITQYFMEDLESLGLLKMDFLGLRNLTLIQKTIDLIQETKGFRIDPDEITGQER
KAQKILAKGEHSTLPKDVEKAYALLEAGKLEGIFQLESSGMLQVVRDLKPSNIEDISSIL
ALYRPGPLDAGLIPKFINRKHGREKIEYEDKVLEPILNETYGIMVYQEQIMKIAQDLAGY
SLGQADLLRRAMGKKKVSEMQKQREKFVDGAAKNGVLKKVADDLFEQMLKFAEYCLSYDT
EILTVEYGFIPIGEIVEKRIECSVYSVDNHGNVYTQPIAQWHNRGLQEVFEYCLEDGSTI
RATKDHKFMTTDKEMLPIDEIFERGLDLLRVEGLPI
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgtccctttgcatattcacagtgactatagcttgctggatggagcaagtcag
ctaccagaattggtagatcaggcgatcgcactggggatgaaagcgatcgcacttacagat
catggtgtcatgtatggagccgttgaactaatcaaaatctgccgtagtaaaaatattaag
ccaattattggcaacgaaatgtatatcattaacggcgatatcgaaaaacaagaacgccgc
cccaaatatcaccaagtagtcctagctaaaaataccaaaggctataaaaacttagtcaaa
ataaccacaatttctcacctccagggtgttcaaggaaaaggaattttctctcgtccttgc
atcaataaagatttattaaaacaatatcacgaaggcttgattgtcactagcgcttgtttg
ggtggagaaattccccaagcaatcctcagtaatagaccagatgcagctcggaaagttgcc
caatggtataaagatgtatttggtgaagattattatttagaaattcaagaccacggctcc
caggaagatcgaattgtcaatgttgaaatcgtcaaaattgcgcgggaattagggattaaa
attattgccaccaacgattcccattatatttcttgttttgacgtagaagcacacgacgcc
ttgctgtgtattcaaactggcaagctaattattgaagataaaagaatgcgttatagcggc
acagaatatcttaaatctgccgacgaaatgaaagcgctatttcgtgaccatttgcctgat
gatatcattgctgaagctatagcaactacagaggaagtagccgataaagtcgagccttac
catattatgggtgagcctcagattcctacaccccctattccctctggtcacactgctgac
acttacgccgaagaagttgcttggctaggacttttagataggttaaatcgcaaatctcgc
aacgaagtcgattccacctacaaagaaaggttggaatacgaactaaaaatgattcagcag
atgggtttctctaaatactttttagtcgtgtgggactacatcaaatttgcgagagataat
aatattcctgtgggaccaggtcggggttcggcggctggttctttggttgcctatgccatg
aaaattaccaacattgacccagtgcatcatggcttactatttgagcgctttttgaatccc
gaacggaaatcaatgcctgatatcgatacagatttctgcattgaacaacgggataaagtg
attgattatgtaactgataaatatggtgcagatagagttgcccaaattataacttttaac
cgcctcacttctaaagcagtcttaaaagatgtcgccagagtgttagatattccctatggg
gaagctgacaaaatggcgaaaatgattcctgtagtgcggggtaaacccactaaactcaag
gtgatgatttctgatgcaacaccagaacaagagtttaaaaacaaatatgataatgacccg
aaagttcgccattggcttgatatggcaatgcgaattgaagggactaacaaaacttttggt
gttcatgcagccggtgtggtgatttctgctgacccacttgatgaaattgtcccactacaa
cgtaataatgacggttctgtaattacccaatatttcatggaagatttggaatcgctgggt
ttgttaaaaatggactttttgggtctgcggaacctgacgctgattcaaaagaccattgat
ttgattcaagaaaccaaaggatttcggattgaccctgatgaaatcacaggacaggaaaga
aaagctcagaagatattagctaaaggtgaacatagcacattacccaaagatgtagaaaaa
gcttatgcactattagaagcaggtaaattagaagggatatttcaattagaatcttcggga
atgcttcaggtagtgcgagatttgaagccttctaacattgaagatatttcttcaattttg
gcactttaccgaccgggtccattagatgcgggattaattcctaaatttattaaccgcaaa
catggacgagagaagattgaatatgaagataaagttctagaaccaatattaaatgaaacc
tatggaattatggtctatcaagagcaaatcatgaaaattgctcaagatttggctggttat
tctctaggacaagctgacttgctgcgtcgcgcaatgggtaaaaagaaagtttccgagatg
caaaagcagcgagaaaaattcgttgacggtgcggcgaagaatggggtgttgaaaaaggta
gctgatgatttatttgagcaaatgttgaagtttgccgaatattgcttaagctatgacaca
gaaattttaacagttgaatatggctttattcccattggggagattgtggaaaagagaatt
gagtgtagtgtttacagtgttgataatcatgggaatgtttatactcaaccgatagcgcag
tggcataatagagggttacaggaagtttttgaatattgtttagaagatggttcaactatt
cgcgcaacaaaagaccataagtttatgacaactgataaggaaatgttgccaattgatgaa
atatttgaacgagggttagatttgttaagggttgagggtttgccgatttaa
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